Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 6.6e-105 384.0 193 100.0
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 9.8e-40 167.5 89 97.8
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 4.0e-33 145.6 89 83.1
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 1.5e-32 143.7 89 80.9
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 2.0e-32 143.3 89 80.9
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 2.0e-32 143.3 89 80.9
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 3.4e-32 142.5 102 71.6
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 7.5e-32 141.4 89 80.9
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 7.5e-32 141.4 89 80.9
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 9.8e-32 141.0 92 77.2
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 1.3e-31 140.6 101 70.3
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 1.3e-31 140.6 89 79.8
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 1.7e-31 140.2 114 67.5
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 2.2e-31 139.8 89 79.8
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 2.2e-31 139.8 101 70.3
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 2.2e-31 139.8 89 76.4
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 2.2e-31 139.8 114 66.7
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 2.8e-31 139.4 89 76.4
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 2.8e-31 139.4 114 66.7
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 2.8e-31 139.4 114 67.5
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 3.7e-31 139.0 89 78.7
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 4.9e-31 138.7 89 78.7
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 4.9e-31 138.7 89 77.5
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 4.9e-31 138.7 114 65.8
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 6.3e-31 138.3 86 79.1
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 6.3e-31 138.3 89 78.7
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 6.3e-31 138.3 95 74.7
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 8.3e-31 137.9 90 75.6
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 8.3e-31 137.9 89 77.5
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 8.3e-31 137.9 114 64.0
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 1.1e-30 137.5 86 77.9
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 1.1e-30 137.5 89 76.4
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.1e-30 137.5 89 76.4
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.1e-30 137.5 89 76.4
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.1e-30 137.5 89 76.4
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 1.4e-30 137.1 85 80.0
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 1.4e-30 137.1 96 74.0
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 1.4e-30 137.1 108 68.5
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 1.4e-30 137.1 89 75.3
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 1.8e-30 136.7 89 76.4
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 1.8e-30 136.7 108 67.6
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 1.8e-30 136.7 89 76.4
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 1.8e-30 136.7 90 74.4
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 2.4e-30 136.3 89 76.4
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 3.2e-30 136.0 89 75.3
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 3.2e-30 136.0 92 76.1
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 3.2e-30 136.0 108 66.7
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 4.1e-30 135.6 95 72.6
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 5.4e-30 135.2 114 63.2
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 1.2e-29 134.0 89 75.3
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 1.2e-29 134.0 98 69.4
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 1.2e-29 134.0 98 69.4
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 1.6e-29 133.7 102 68.6
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.6e-29 133.7 101 67.3
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.6e-29 133.7 101 67.3
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.6e-29 133.7 101 67.3
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 2.0e-29 133.3 84 78.6
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 2.7e-29 132.9 101 66.3
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 3.5e-29 132.5 89 74.2
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 3.5e-29 132.5 108 64.8
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 1.7e-28 130.2 81 79.0
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 3.9e-28 129.0 95 69.5
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 6.6e-28 128.3 95 69.5
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 5.6e-27 125.2 81 77.8
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 1.2e-26 124.0 81 74.1
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 1.8e-17 93.6 62 69.4
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.1e-11 74.3 49 67.3
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 7.3e-11 71.6 48 66.7
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 9.5e-11 71.2 48 64.6
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 2.1e-10 70.1 48 64.6
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 2.1e-10 70.1 46 67.4
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 4.7e-10 68.9 83 43.4
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 4.7e-10 68.9 89 48.3
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.8e-09 67.0 46 65.2
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 4.0e-09 65.9 46 65.2
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 6.8e-09 65.1 47 61.7
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 6.8e-09 65.1 48 62.5
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 2.0e-08 63.5 46 65.2
SEGI_10312 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.3e-07 60.8 35 77.1
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 7.1e-06 55.1 44 59.1


User provided reference genes

Program Settings