Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09499 Sequoiadendron giganteum HOM05D001723 ORTHO05D385653 2.9e-60 235.0 113 100.0
PGSC0003DMG402004850 Solanum tuberosum HOM05D001723 ORTHO05D001706 1.4e-09 66.6 62 43.5
SEGI_01693 Sequoiadendron giganteum HOM05D001723 ORTHO05D001706 6.8e-09 64.3 63 47.6
SMO115G0081 Selaginella moellendorffii HOM05D001723 ORTHO05D001706 8.9e-09 63.9 56 50.0
Nitab4.5_0001295g0220 Nicotiana tabacum HOM05D001723 ORTHO05D001706 1.5e-08 63.2 61 41.0
Peaxi162Scf00038g01619 Petunia axillaris HOM05D001723 ORTHO05D001706 3.4e-08 62.0 64 37.5
Nitab4.5_0010251g0020 Nicotiana tabacum HOM05D001723 ORTHO05D001706 4.4e-08 61.6 61 41.0
Solyc06g062750.3 Solanum lycopersicum HOM05D001723 ORTHO05D001706 4.4e-08 61.6 61 41.0
Sopen06g022200 Solanum pennellii HOM05D001723 ORTHO05D001706 4.4e-08 61.6 61 41.0
CAN.G862.7 Capsicum annuum HOM05D001723 ORTHO05D001706 7.5e-08 60.8 60 40.0
Hma1.2p1_1128F.1_g259790 Hydrangea macrophylla HOM05D001723 ORTHO05D001706 1.3e-07 60.1 62 46.8
Lj3g0019209 Lotus japonicus HOM05D001723 ORTHO05D001706 1.3e-07 60.1 75 38.7
Nitab4.5_0000255g0280 Nicotiana tabacum HOM05D001723 ORTHO05D001706 1.7e-07 59.7 61 39.3
Phvul.005G157500 Phaseolus vulgaris HOM05D001723 ORTHO05D001706 1.7e-07 59.7 53 47.2
Ca_01213_v3 Cicer arietinum L. HOM05D001723 ORTHO05D001706 2.9e-07 58.9 76 38.2
Nitab4.5_0005918g0060 Nicotiana tabacum HOM05D001723 ORTHO05D001706 2.9e-07 58.9 61 39.3
Peaxi162Scf00207g01342 Petunia axillaris HOM05D001723 ORTHO05D001706 2.9e-07 58.9 61 37.7
PGSC0003DMG400002580 Solanum tuberosum HOM05D001723 ORTHO05D001706 2.9e-07 58.9 61 37.7
CAN.G825.29 Capsicum annuum HOM05D001723 ORTHO05D001706 3.7e-07 58.5 61 37.7
CiPaw.01G223600 Carya illinoinensis HOM05D001723 ORTHO05D001706 3.7e-07 58.5 51 45.1
Lalb_Chr22g0351901 Lupinus albus HOM05D001723 ORTHO05D001706 3.7e-07 58.5 61 41.0
Solyc03g121730.3 Solanum lycopersicum HOM05D001723 ORTHO05D001706 3.7e-07 58.5 61 37.7
Actinidia39106 Actinidia chinensis HOM05D001723 ORTHO05D001706 4.9e-07 58.2 60 38.3
Psat5g291520 Pisum sativum HOM05D001723 ORTHO05D001706 4.9e-07 58.2 76 36.8
Prupe.3G047500 Prunus persica HOM05D001723 ORTHO05D001706 4.9e-07 58.2 55 41.8
RcHm_v2.0_Chr2g0143621 Rosa chinensis HOM05D001723 ORTHO05D001706 4.9e-07 58.2 55 41.8
TWI79G1400 Tripterygium wilfordii HOM05D001723 ORTHO05D001706 6.4e-07 57.8 53 47.2
Haze_15978 Corylus avellana HOM05D001723 ORTHO05D001706 8.3e-07 57.4 51 47.1
Glyma.15G025600 Glycine max HOM05D001723 ORTHO05D001706 8.3e-07 57.4 71 40.8
PSO832G2377 Papaver somniferum HOM05D001723 ORTHO05D001706 8.3e-07 57.4 59 45.8
Phvul.010G137700 Phaseolus vulgaris HOM05D001723 ORTHO05D001706 8.3e-07 57.4 53 43.4
FAN02G1790 Fragaria x ananassa HOM05D001723 ORTHO05D001706 1.1e-06 57.0 55 40.0
FAN09G0096 Fragaria x ananassa HOM05D001723 ORTHO05D001706 1.1e-06 57.0 55 40.0
FAN14G4892 Fragaria x ananassa HOM05D001723 ORTHO05D001706 1.1e-06 57.0 55 40.0
TWI31G1139 Tripterygium wilfordii HOM05D001723 ORTHO05D001706 1.1e-06 57.0 51 49.0
Cfa003568 Carpinus fangiana HOM05D001723 ORTHO05D001706 1.9e-06 56.2 51 43.1
Glyma.07G008700 Glycine max HOM05D001723 ORTHO05D001706 1.9e-06 56.2 75 36.0
Pp3c18_5480 Physcomitrium patens HOM05D001723 ORTHO05D001706 1.9e-06 56.2 63 42.9
arahy.Tifrunner.gnm1.ann1.B718UC Arachis hypogaea HOM05D001723 ORTHO05D001706 2.4e-06 55.8 51 41.2
CSS0002151 Camellia sinensis var. sinensis HOM05D001723 ORTHO05D001706 2.4e-06 55.8 60 38.3
FAN05G1430 Fragaria x ananassa HOM05D001723 ORTHO05D001706 2.4e-06 55.8 55 40.0
QL05p010435 Quercus lobata HOM05D001723 ORTHO05D001706 2.4e-06 55.8 51 47.1
GSVIVG01016798001 Vitis vinifera HOM05D001723 ORTHO05D001706 2.4e-06 55.8 57 42.1
Dinv04019 Davidia involucrata HOM05D001723 ORTHO05D001706 3.2e-06 55.5 59 40.7
Duzib187G1307 Durio zibethinus HOM05D001723 ORTHO05D001706 3.2e-06 55.5 51 51.0
Lalb_Chr24g0396471 Lupinus albus HOM05D001723 ORTHO05D001706 3.2e-06 55.5 52 44.2
Sopen03g040540 Solanum pennellii HOM05D001723 ORTHO05D001706 3.2e-06 55.5 61 36.1
Duzib168G2330 Durio zibethinus HOM05D001723 ORTHO05D001706 4.1e-06 55.1 51 49.0
MD09G1191400 Malus domestica HOM05D001723 ORTHO05D001706 4.1e-06 55.1 55 40.0
Ah.14g085140 Amaranthus hybridus HOM05D001723 ORTHO05D001706 5.4e-06 54.7 53 37.7
arahy.Tifrunner.gnm1.ann1.U9TUQQ Arachis hypogaea HOM05D001723 ORTHO05D001706 5.4e-06 54.7 51 41.2
AUR62029045 Chenopodium quinoa HOM05D001723 ORTHO05D001706 5.4e-06 54.7 53 43.4
FvH4_6g33730 Fragaria vesca HOM05D001723 ORTHO05D001706 5.4e-06 54.7 55 38.2
SGA_v2.0_scaffold122G33365 Striga asiatica HOM05D001723 ORTHO05D001706 5.4e-06 54.7 59 39.0
MSTRG.10977 Avicennia marina HOM05D001723 ORTHO05D001706 7.1e-06 54.3 63 36.5
Glyma.11G005100 Glycine max HOM05D001723 ORTHO05D001706 7.1e-06 54.3 51 49.0
MBI01_g20338_MAGBIO Magnolia biondii HOM05D001723 ORTHO05D001706 7.1e-06 54.3 51 47.1
CiPaw.02G139000 Carya illinoinensis HOM05D001723 ORTHO05D001706 9.2e-06 53.9 56 41.1
Ciclev10025780m.g Citrus clementina HOM05D001723 ORTHO05D001706 9.2e-06 53.9 61 45.9
Hma1.2p1_0496F.1_g165920 Hydrangea macrophylla HOM05D001723 ORTHO05D001706 9.2e-06 53.9 62 37.1
Lj5A43T72 Lonicera japonica HOM05D001723 ORTHO05D001706 9.2e-06 53.9 56 44.6
Pp3c21_18240 Physcomitrium patens HOM05D001723 ORTHO05D001706 9.2e-06 53.9 54 46.3
VMungo1080G0451 Vigna mungo HOM05D001723 ORTHO05D001706 9.2e-06 53.9 53 45.3


User provided reference genes

Program Settings