Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 1.2e-183 646.4 327 100.0
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 1.5e-101 373.6 302 59.3
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 9.2e-99 364.4 297 59.9
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 6.0e-98 361.7 296 58.1
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 1.3e-97 360.5 296 57.8
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 1.7e-97 360.1 293 58.7
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 5.1e-97 358.6 279 59.5
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 2.5e-96 356.3 305 55.4
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 7.3e-96 354.8 305 55.4
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 2.1e-95 353.2 296 55.7
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 2.8e-95 352.8 302 56.0
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 3.6e-95 352.4 302 57.0
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 6.2e-95 351.7 296 56.4
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 2.4e-94 349.7 301 56.5
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 3.4e-93 345.9 319 53.6
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 5.8e-93 345.1 325 52.6
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 1.3e-92 344.0 298 54.4
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 1.3e-92 344.0 298 54.4
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 1.7e-92 343.6 327 52.6
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 2.2e-92 343.2 304 55.3
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 2.2e-92 343.2 297 53.9
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 2.9e-92 342.8 300 56.0
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 4.9e-92 342.0 321 53.0
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 6.4e-92 341.7 303 54.1
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 1.9e-91 340.1 290 54.8
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 4.2e-91 339.0 295 56.3
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 7.1e-91 338.2 303 55.1
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 2.1e-90 336.7 296 53.4
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 2.1e-90 336.7 303 55.4
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 2.7e-90 336.3 290 54.1
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 6.0e-90 335.1 302 52.6
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 1.0e-89 334.3 296 54.4
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 1.0e-89 334.3 285 55.1
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 1.3e-89 334.0 305 54.8
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 1.3e-89 334.0 303 53.1
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 2.3e-89 333.2 301 52.5
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 5.1e-89 332.0 302 52.3
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 1.5e-88 330.5 290 52.8
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 1.5e-88 330.5 295 54.9
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 2.5e-88 329.7 324 51.2
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 4.3e-88 328.9 304 52.0
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 4.3e-88 328.9 296 53.0
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 9.6e-88 327.8 305 52.5
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 4.8e-87 325.5 325 52.6
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 8.1e-87 324.7 311 51.4
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 2.4e-86 323.2 290 52.4
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 2.4e-86 323.2 302 52.6
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 2.4e-86 323.2 289 55.4
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 3.1e-86 322.8 290 52.4
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 9.0e-86 321.2 294 51.7
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 9.0e-86 321.2 294 52.0
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 2.0e-85 320.1 302 50.3
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 2.6e-85 319.7 294 51.4
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 2.6e-85 319.7 317 51.4
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 4.4e-85 318.9 290 51.4
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 4.4e-85 318.9 306 52.3
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 2.9e-84 316.2 302 50.0
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 3.8e-84 315.8 302 51.3
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.4e-83 313.9 268 55.6
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 2.4e-83 313.2 284 52.5
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 4.2e-83 312.4 297 50.5
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 5.4e-83 312.0 291 51.2
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 7.1e-83 311.6 324 47.8
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 1.6e-82 310.5 284 51.8
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 1.0e-81 307.8 291 52.2
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 1.3e-81 307.4 284 51.4
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 3.0e-81 306.2 289 52.9
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 6.6e-81 305.1 325 52.0
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 1.1e-80 304.3 265 55.5
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.8e-78 297.0 289 51.9
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.4e-75 287.3 259 54.4
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 5.4e-75 285.4 323 44.3
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 9.3e-75 284.6 378 43.4
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 3.3e-72 276.2 274 53.3
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 9.6e-72 274.6 277 50.9
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 3.1e-70 269.6 320 44.4
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 6.5e-68 261.9 331 43.2
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 2.6e-61 240.0 324 43.8
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 1.0e-60 238.0 264 47.0
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 2.2e-60 236.9 209 52.2
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 5.0e-60 235.7 203 54.2
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 4.8e-55 219.2 235 50.2
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 6.3e-55 218.8 203 49.3
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 1.1e-54 218.0 209 49.3
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 1.8e-54 217.2 270 44.1
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 3.4e-53 213.0 325 40.6
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 1.3e-52 211.1 213 46.5
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 1.3e-52 211.1 209 50.7
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.5e-51 206.8 254 44.9
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 8.5e-44 181.8 173 53.8
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 1.0e-41 174.9 289 36.3
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 9.7e-40 168.3 294 38.8
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 1.1e-38 164.9 209 41.1
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 1.5e-35 154.5 121 59.5
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 2.0e-32 144.1 124 53.2
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 5.7e-32 142.5 295 30.8
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 1.3e-31 141.4 185 38.4
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 1.3e-28 131.3 169 46.2
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 5.5e-27 125.9 110 53.6
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 2.7e-26 123.6 155 39.4
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 5.2e-25 119.4 102 59.8
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.6e-24 117.1 94 62.8
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 2.4e-22 110.5 94 56.4
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 1.3e-20 104.8 80 53.8
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 2.9e-20 103.6 74 60.8
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 1.1e-19 101.7 284 28.5
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.5e-19 101.3 89 55.1
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 3.2e-19 100.1 178 34.3
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 9.4e-19 98.6 74 58.1
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 4.0e-17 93.2 77 53.2
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 3.4e-16 90.1 74 60.8
Pp3c7_10090 Physcomitrium patens HOM05D006784 ORTHO05D008508 2.3e-12 77.4 198 26.8
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 8.6e-12 75.5 60 60.0
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 1.9e-11 74.3 226 24.3
AagrBONN_evm.TU.Sc2ySwM_362.2891 Anthoceros agrestis HOM05D004656 ORTHO05D000048 4.4e-08 63.2 269 28.3
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.8e-06 57.8 45 53.3
Cre02.g113050 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D008508 4.1e-06 56.6 103 33.0
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 5.4e-06 56.2 152 26.3
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 5.4e-06 56.2 152 26.3


User provided reference genes

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