Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09433 Sequoiadendron giganteum HOM05D003842 ORTHO05D004436 3.6e-126 454.9 227 100.0
Ciclev10023867m.g Citrus clementina HOM05D003842 ORTHO05D004436 3.4e-52 209.1 188 55.9
Atru.chr8.1720 Acer truncatum HOM05D003842 ORTHO05D004436 6.5e-51 204.9 197 52.3
Aqoxy1G01066 Aquilegia oxysepala HOM05D003842 ORTHO05D004436 1.1e-50 204.1 188 53.7
MD12G1104900 Malus domestica HOM05D003842 ORTHO05D004436 2.5e-50 203.0 188 53.7
Cfa016461 Carpinus fangiana HOM05D003842 ORTHO05D004436 3.2e-50 202.6 188 53.2
Duzib093G0118 Durio zibethinus HOM05D003842 ORTHO05D004436 3.2e-50 202.6 188 53.2
Sabra06G0095000 Salix brachista HOM05D003842 ORTHO05D004436 3.2e-50 202.6 187 54.0
Haze_19462 Corylus avellana HOM05D003842 ORTHO05D004436 4.2e-50 202.2 188 53.2
TAR633G0529 Trochodendron aralioides HOM05D003842 ORTHO05D004436 7.2e-50 201.4 187 55.1
Potri.006G120800 Populus trichocarpa HOM05D003842 ORTHO05D004436 9.4e-50 201.1 187 53.5
Rhsim03G0088500 Rhododendron simsii HOM05D003842 ORTHO05D004436 1.2e-49 200.7 188 52.7
Manes.08G013802 Manihot esculenta HOM05D003842 ORTHO05D004436 2.7e-49 199.5 188 53.7
Dinv35821 Davidia involucrata HOM05D003842 ORTHO05D004436 3.6e-49 199.1 188 53.7
GSVIVG01033696001 Vitis vinifera HOM05D003842 ORTHO05D004436 4.7e-49 198.7 188 54.8
PSO339G3623 Papaver somniferum HOM05D003842 ORTHO05D004436 6.1e-49 198.4 188 54.3
Thecc.05G072900 Theobroma cacao HOM05D003842 ORTHO05D004436 6.1e-49 198.4 187 52.4
Duzib106G1778 Durio zibethinus HOM05D003842 ORTHO05D004436 1.0e-48 197.6 188 52.7
FvH4_6g17010 Fragaria vesca HOM05D003842 ORTHO05D004436 1.0e-48 197.6 188 52.1
FAN02G1267 Fragaria x ananassa HOM05D003842 ORTHO05D004436 1.4e-48 197.2 188 52.1
FAN05G4099 Fragaria x ananassa HOM05D003842 ORTHO05D004436 1.8e-48 196.8 188 52.1
Gohir.A09G144400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 1.8e-48 196.8 187 52.4
QL07p041738 Quercus lobata HOM05D003842 ORTHO05D004436 2.3e-48 196.4 188 51.6
CANSAT80G2389 Cannabis sativa HOM05D003842 ORTHO05D004436 3.0e-48 196.1 188 50.5
AUR62036532 Chenopodium quinoa HOM05D003842 ORTHO05D004436 3.0e-48 196.1 187 53.5
Glyma.19G186900 Glycine max HOM05D003842 ORTHO05D004436 3.0e-48 196.1 188 51.6
Prupe.7G124700 Prunus persica HOM05D003842 ORTHO05D004436 3.0e-48 196.1 188 51.1
Gohir.D09G140200 Gossypium hirsutum HOM05D003842 ORTHO05D004436 3.9e-48 195.7 187 51.9
Nitab4.5_0003314g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 3.9e-48 195.7 188 52.1
THA.LOC104818591 Tarenaya hassleriana HOM05D003842 ORTHO05D004436 3.9e-48 195.7 188 52.1
AT2G36810 Arabidopsis thaliana HOM05D003842 ORTHO05D004436 5.1e-48 195.3 188 52.7
Gorai.006G160800 Gossypium raimondii HOM05D003842 ORTHO05D004436 5.1e-48 195.3 187 51.9
FAN05G0072 Fragaria x ananassa HOM05D003842 ORTHO05D004436 6.7e-48 194.9 188 51.6
RcHm_v2.0_Chr3g0471001 Rosa chinensis HOM05D003842 ORTHO05D004436 6.7e-48 194.9 188 50.5
AL4G33000 Arabidopsis lyrata HOM05D003842 ORTHO05D004436 1.1e-47 194.1 188 53.2
COL.COLO4_26898 Corchorus olitorius HOM05D003842 ORTHO05D004436 1.1e-47 194.1 187 53.5
Lalb_Chr20g0112381 Lupinus albus HOM05D003842 ORTHO05D004436 1.5e-47 193.7 188 52.7
PSO063G4107 Papaver somniferum HOM05D003842 ORTHO05D004436 2.0e-47 193.4 188 53.2
TWI74G0820 Tripterygium wilfordii HOM05D003842 ORTHO05D004436 2.0e-47 193.4 187 51.3
Cpa.g.sc5.147 Carica papaya HOM05D003842 ORTHO05D004436 2.6e-47 193.0 188 52.1
Gorai.007G372400 Gossypium raimondii HOM05D003842 ORTHO05D004436 2.6e-47 193.0 189 50.3
CSS0021824 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 3.3e-47 192.6 189 52.4
CSS0023266 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 3.3e-47 192.6 189 52.4
AUR62042272 Chenopodium quinoa HOM05D003842 ORTHO05D004436 4.4e-47 192.2 187 52.9
FAN09G2316 Fragaria x ananassa HOM05D003842 ORTHO05D004436 4.4e-47 192.2 188 51.1
Carub.0004s1865 Capsella rubella HOM05D003842 ORTHO05D004436 7.4e-47 191.4 188 51.6
Gohir.A11G323300 Gossypium hirsutum HOM05D003842 ORTHO05D004436 7.4e-47 191.4 189 49.2
Gohir.D11G342400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 7.4e-47 191.4 189 49.7
Nitab4.5_0002535g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 7.4e-47 191.4 188 51.6
Peaxi162Scf00435g01013 Petunia axillaris HOM05D003842 ORTHO05D004436 7.4e-47 191.4 188 50.5
CiPaw.09G003300 Carya illinoinensis HOM05D003842 ORTHO05D004436 9.7e-47 191.0 188 51.6
Sp4g19070 Schrenkiella parvula HOM05D003842 ORTHO05D004436 9.7e-47 191.0 188 51.1
ECA233G4297 Erigeron canadensis HOM05D003842 ORTHO05D004436 1.7e-46 190.3 192 50.5
Phvul.001G181800 Phaseolus vulgaris HOM05D003842 ORTHO05D004436 1.7e-46 190.3 188 50.0
Aa31LG5G22020 Aethionema arabicum HOM05D003842 ORTHO05D004436 2.2e-46 189.9 188 51.1
Medtr7g102430 Medicago truncatula HOM05D003842 ORTHO05D004436 3.7e-46 189.1 188 49.5
Nn6g35197 Nelumbo nucifera HOM05D003842 ORTHO05D004436 3.7e-46 189.1 188 53.2
Sopen09g003320 Solanum pennellii HOM05D003842 ORTHO05D004436 3.7e-46 189.1 188 50.5
CARHR131190 Cardamine hirsuta HOM05D003842 ORTHO05D004436 4.8e-46 188.7 188 51.1
Sed0026042 Sechium edule HOM05D003842 ORTHO05D004436 4.8e-46 188.7 188 50.0
Ca_08873_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 6.3e-46 188.3 188 49.5
Thhalv10016131m.g Eutrema salsugineum HOM05D003842 ORTHO05D004436 6.3e-46 188.3 188 51.6
A04p28120 Brassica napus HOM05D003842 ORTHO05D004436 8.2e-46 188.0 192 51.0
BraA04t18297Z Brassica rapa HOM05D003842 ORTHO05D004436 8.2e-46 188.0 192 50.5
Cc06_g04620 Coffea canephora HOM05D003842 ORTHO05D004436 8.2e-46 188.0 188 48.9
Solyc09g008490.4 Solanum lycopersicum HOM05D003842 ORTHO05D004436 8.2e-46 188.0 188 50.0
BcaC02g07579 Brassica carinata HOM05D003842 ORTHO05D004436 1.1e-45 187.6 192 51.0
C04p65510 Brassica napus HOM05D003842 ORTHO05D004436 1.1e-45 187.6 192 51.0
BolC4t28040H Brassica oleracea HOM05D003842 ORTHO05D004436 1.1e-45 187.6 192 51.0
Ca_08928_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.1e-45 187.6 188 49.5
Lj1g0002569 Lotus japonicus HOM05D003842 ORTHO05D004436 1.1e-45 187.6 194 50.0
MELO3C024492.2 Cucumis melo HOM05D003842 ORTHO05D004436 1.8e-45 186.8 188 48.4
PGR142G1271 Punica granatum HOM05D003842 ORTHO05D004436 3.1e-45 186.0 187 49.7
EL10Ac7g16718 Beta vulgaris HOM05D003842 ORTHO05D004436 4.1e-45 185.7 187 50.8
CAN.G1038.13 Capsicum annuum HOM05D003842 ORTHO05D004436 9.1e-45 184.5 188 49.5
CsaV3_6G040160 Cucumis sativus L. HOM05D003842 ORTHO05D004436 9.1e-45 184.5 188 47.9
Ah.08g211380 Amaranthus hybridus HOM05D003842 ORTHO05D004436 1.2e-44 184.1 187 51.3
Oeu045240.1 Olea europaea HOM05D003842 ORTHO05D004436 1.5e-44 183.7 188 50.0
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 2.0e-44 183.3 192 49.5
arahy.Tifrunner.gnm1.ann1.CVPH5H Arachis hypogaea HOM05D003842 ORTHO05D004436 2.6e-44 183.0 188 50.0
HanXRQChr13g0400661 Helianthus annuus HOM05D003842 ORTHO05D004436 2.6e-44 183.0 192 50.0
Pp3c2_21970 Physcomitrium patens HOM05D003842 ORTHO05D004436 2.6e-44 183.0 193 45.1
Sc20g0005740 Simmondsia chinensis HOM05D003842 ORTHO05D004436 7.7e-44 181.4 188 49.5
ATR0043G024 Amborella trichopoda HOM05D003842 ORTHO05D004436 1.0e-43 181.0 189 49.7
arahy.Tifrunner.gnm1.ann1.BQYP5G Arachis hypogaea HOM05D003842 ORTHO05D004436 1.3e-43 180.6 188 49.5
Mapoly0008s0039 Marchantia polymorpha HOM05D003842 ORTHO05D004436 2.9e-43 179.5 189 47.6
Lj3C992G6 Lonicera japonica HOM05D003842 ORTHO05D004436 3.8e-43 179.1 188 50.5
Eucgr.K02431 Eucalyptus grandis HOM05D003842 ORTHO05D004436 1.5e-42 177.2 188 47.9
ClCG04G009540 Citrullus lanatus HOM05D003842 ORTHO05D004436 2.5e-42 176.4 189 47.1
SGA_v2.0_scaffold224G42922 Striga asiatica HOM05D003842 ORTHO05D004436 4.2e-42 175.6 188 47.9
Migut.L01724 Erythranthe guttata HOM05D003842 ORTHO05D004436 2.1e-41 173.3 188 47.9
MSTRG.26674 Avicennia marina HOM05D003842 ORTHO05D004436 3.6e-41 172.6 188 47.3
AagrBONN_evm.TU.Sc2ySwM_228.1882 Anthoceros agrestis HOM05D003842 ORTHO05D004436 3.3e-39 166.0 188 42.6
CDE07G0362 Ceratophyllum demersum HOM05D003842 ORTHO05D004436 1.4e-37 160.6 190 42.6
TPR.G8693 Trifolium pratense HOM05D003842 ORTHO05D004436 4.5e-36 155.6 157 49.7
Zm00001eb003810 Zea mays HOM05D003842 ORTHO05D004436 8.0e-33 144.8 187 41.7
CBR_g53950 Chara braunii HOM05D003842 ORTHO05D004436 3.0e-32 142.9 190 41.1
SMO137G0253 Selaginella moellendorffii HOM05D003842 ORTHO05D004436 1.5e-31 140.6 190 39.5
SMO207G0008 Selaginella moellendorffii HOM05D003842 ORTHO05D004436 3.4e-31 139.4 190 39.5
Pp3c22_4780 Physcomitrium patens HOM05D003842 ORTHO05D004436 4.1e-29 132.5 188 38.8
Psat3g040240 Pisum sativum HOM05D003842 ORTHO05D004436 1.0e-16 91.3 103 44.7


User provided reference genes

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