Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 9.3e-231 803.1 392 100.0
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 6.0e-137 491.5 393 62.1
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 7.8e-137 491.1 393 61.6
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 1.7e-136 490.0 393 61.8
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 3.9e-136 488.8 392 60.2
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 7.3e-135 484.6 401 61.1
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 9.6e-135 484.2 393 62.1
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 9.6e-135 484.2 401 60.8
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 2.8e-134 482.6 394 61.4
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 6.2e-134 481.5 395 61.0
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 1.1e-133 480.7 393 61.3
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 1.1e-133 480.7 393 61.3
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 1.1e-133 480.7 393 62.3
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 1.4e-133 480.3 393 60.3
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 1.8e-133 479.9 395 61.0
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 6.9e-133 478.0 406 59.6
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 6.9e-133 478.0 418 57.9
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 9.0e-133 477.6 393 61.3
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 1.5e-132 476.9 393 61.3
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 1.5e-132 476.9 394 61.7
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 2.0e-132 476.5 393 60.6
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 2.6e-132 476.1 393 61.3
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 3.4e-132 475.7 395 59.7
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 4.5e-132 475.3 393 61.3
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 4.5e-132 475.3 396 60.1
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 4.5e-132 475.3 393 60.3
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 7.6e-132 474.6 397 60.2
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 7.6e-132 474.6 395 58.7
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 1.3e-131 473.8 394 60.4
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 1.7e-131 473.4 397 60.2
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 1.7e-131 473.4 392 59.7
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 2.9e-131 472.6 393 60.3
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 3.8e-131 472.2 398 60.6
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 6.4e-131 471.5 408 60.5
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 2.4e-130 469.5 394 60.7
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 3.2e-130 469.2 394 60.9
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 3.2e-130 469.2 393 58.8
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 4.2e-130 468.8 393 59.8
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 4.2e-130 468.8 395 59.5
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 5.4e-130 468.4 393 60.6
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 7.1e-130 468.0 393 60.3
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 7.1e-130 468.0 392 58.7
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 9.3e-130 467.6 397 59.7
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 2.1e-129 466.5 400 60.5
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 3.5e-129 465.7 393 59.0
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 3.5e-129 465.7 396 58.6
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 4.6e-129 465.3 393 59.5
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 1.3e-128 463.8 401 60.3
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 1.8e-128 463.4 392 60.2
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 1.8e-128 463.4 394 58.1
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 1.8e-128 463.4 393 59.0
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 2.3e-128 463.0 392 59.7
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 5.1e-128 461.8 411 57.2
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 5.1e-128 461.8 402 57.0
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 8.7e-128 461.1 396 58.8
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 8.7e-128 461.1 396 58.8
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 1.9e-127 459.9 394 58.6
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 3.3e-127 459.1 394 59.6
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 4.3e-127 458.8 395 58.2
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 9.6e-127 457.6 396 57.8
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 9.6e-127 457.6 403 57.3
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 1.6e-126 456.8 400 59.2
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 8.1e-126 454.5 401 58.4
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 1.4e-125 453.8 401 59.6
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 1.4e-125 453.8 400 59.0
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 2.4e-125 453.0 406 56.7
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 4.0e-125 452.2 396 58.1
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 2.6e-124 449.5 395 57.5
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 2.6e-124 449.5 396 57.6
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 5.8e-124 448.4 393 57.0
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 7.6e-124 448.0 393 57.3
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 9.9e-124 447.6 401 57.4
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 1.4e-122 443.7 423 55.1
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 2.4e-122 443.0 409 57.5
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 4.2e-122 442.2 376 59.3
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 2.1e-118 429.9 400 55.5
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 6.2e-118 428.3 415 54.5
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 4.0e-117 425.6 397 53.7
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 2.5e-114 416.4 428 52.8
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 3.2e-114 416.0 405 55.8
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 7.1e-114 414.8 390 54.1
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 2.7e-113 412.9 358 59.8
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 3.5e-113 412.5 396 52.8
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 1.0e-112 411.0 421 53.2
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 3.9e-112 409.1 432 51.2
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 3.3e-111 406.0 430 50.9
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 4.3e-111 405.6 430 50.7
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 7.4e-111 404.8 447 49.4
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 9.6e-111 404.4 382 56.0
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 2.1e-110 403.3 392 54.3
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 8.2e-110 401.4 430 50.7
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 4.2e-106 389.0 379 56.2
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 5.5e-106 388.7 477 46.3
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 1.6e-105 387.1 395 54.4
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 3.6e-105 386.0 396 51.8
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 6.1e-105 385.2 489 45.8
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 1.5e-100 370.5 427 48.0
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.3e-99 367.5 177 100.0
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.3e-99 367.5 177 100.0
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 7.9e-97 358.2 399 48.9
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 1.4e-93 347.4 393 49.4
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 3.1e-93 346.3 317 56.8
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 4.1e-93 345.9 401 48.9
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 1.3e-91 340.9 321 54.8
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 1.9e-90 337.0 308 54.9
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 7.2e-90 335.1 393 47.6
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 1.0e-88 331.3 315 54.0
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 6.3e-86 322.0 324 51.9
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 3.1e-85 319.7 406 46.1
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 1.6e-84 317.4 316 52.8
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 3.5e-84 316.2 392 45.4
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 4.2e-82 309.3 361 47.1
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 2.6e-79 300.1 406 45.6
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 7.5e-79 298.5 285 52.6
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 9.4e-74 281.6 237 57.4
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 7.5e-71 271.9 312 46.2
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 2.2e-70 270.4 325 46.2
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 3.7e-70 269.6 396 40.9
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 1.8e-69 267.3 400 40.0
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 7.5e-55 218.8 429 35.4
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 4.3e-50 203.0 212 48.6
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 7.8e-44 182.2 282 38.3
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 4.3e-42 176.4 161 57.1
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 5.6e-34 149.4 267 37.1
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 1.1e-32 145.2 102 71.6
Cc02_g08780 Coffea canephora HOM05D005077 ORTHO05D006889 6.8e-32 142.5 77 84.4
Lalb_Chr22g0358851 Lupinus albus HOM05D005077 ORTHO05D006889 6.8e-32 142.5 77 84.4
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 9.9e-31 138.7 174 42.0
QL07p018546 Quercus lobata HOM05D005077 ORTHO05D006889 9.9e-31 138.7 77 80.5
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 2.5e-26 124.0 105 56.2
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 1.9e-21 107.8 65 80.0
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 1.1e-16 92.0 124 38.7
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 1.4e-16 91.7 57 73.7
EL10Ac5g11645 Beta vulgaris HOM05D005077 ORTHO05D006889 2.9e-14 84.0 50 72.0
BcaC05g29940 Brassica carinata HOM05D005077 ORTHO05D018175 1.6e-12 78.2 61 70.5
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 1.3e-09 68.6 57 52.6
Hund05190 Selenicereus undatus HOM05D005077 ORTHO05D006889 1.7e-06 58.2 46 58.7


User provided reference genes

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