Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.1e-107 393.3 191 100.0
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 3.9e-49 198.7 144 61.1
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 6.7e-49 198.0 144 60.4
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 6.7e-49 198.0 144 57.6
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 1.9e-48 196.4 157 54.8
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 2.5e-48 196.1 131 64.1
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 9.6e-48 194.1 131 64.1
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 9.6e-48 194.1 131 66.4
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 2.8e-47 192.6 131 61.8
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 2.8e-47 192.6 136 60.3
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 4.8e-47 191.8 131 62.6
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 4.8e-47 191.8 149 55.7
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 8.2e-47 191.0 131 61.8
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 8.2e-47 191.0 136 59.6
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 1.8e-46 189.9 144 60.4
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 3.1e-46 189.1 144 56.2
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 3.1e-46 189.1 144 54.9
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 4.1e-46 188.7 131 62.6
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 4.1e-46 188.7 136 61.8
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 4.1e-46 188.7 146 58.9
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 6.9e-46 188.0 144 57.6
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 9.0e-46 187.6 144 59.0
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 9.0e-46 187.6 157 54.1
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 4.5e-45 185.3 144 54.9
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 5.9e-45 184.9 131 61.8
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 5.9e-45 184.9 131 58.0
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 7.6e-45 184.5 157 52.2
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 1.0e-44 184.1 142 58.5
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 1.3e-44 183.7 139 61.2
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 1.3e-44 183.7 139 61.2
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 1.3e-44 183.7 131 59.5
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 1.3e-44 183.7 136 55.1
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 1.7e-44 183.3 144 54.2
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 2.2e-44 183.0 131 61.8
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 2.2e-44 183.0 144 56.9
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 2.2e-44 183.0 157 51.6
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 2.9e-44 182.6 147 57.8
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 2.9e-44 182.6 147 57.8
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 2.9e-44 182.6 136 56.6
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 2.9e-44 182.6 136 56.6
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 2.9e-44 182.6 131 59.5
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 3.8e-44 182.2 131 58.8
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 5.0e-44 181.8 131 59.5
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 6.5e-44 181.4 144 54.9
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 6.5e-44 181.4 128 63.3
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 1.1e-43 180.6 144 54.2
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 1.1e-43 180.6 144 54.2
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 1.9e-43 179.9 128 59.4
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 2.5e-43 179.5 144 55.6
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 3.2e-43 179.1 131 57.3
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 4.2e-43 178.7 130 56.2
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 4.2e-43 178.7 144 55.6
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 7.2e-43 177.9 144 52.1
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 1.2e-42 177.2 144 54.9
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 1.2e-42 177.2 157 49.7
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 3.6e-42 175.6 144 53.5
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 4.6e-42 175.3 144 52.8
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 4.6e-42 175.3 144 53.5
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 7.9e-42 174.5 144 52.8
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 7.9e-42 174.5 157 50.3
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.0e-41 174.1 136 55.9
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 2.3e-41 172.9 144 53.5
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 2.3e-41 172.9 144 51.4
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 3.0e-41 172.6 144 51.4
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 3.0e-41 172.6 144 51.4
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 3.9e-41 172.2 144 50.7
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 3.9e-41 172.2 157 49.0
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 6.7e-41 171.4 144 52.1
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 6.7e-41 171.4 131 56.5
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 6.7e-41 171.4 136 55.1
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 8.7e-41 171.0 144 51.4
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 1.1e-40 170.6 144 52.1
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.9e-40 169.9 144 53.5
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 2.5e-40 169.5 144 51.4
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 2.5e-40 169.5 144 52.1
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 2.5e-40 169.5 144 52.8
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 3.3e-40 169.1 131 58.0
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 9.7e-40 167.5 131 55.7
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 2.2e-39 166.4 156 48.7
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 2.2e-39 166.4 131 54.2
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 3.7e-39 165.6 157 48.4
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 4.8e-39 165.2 144 50.0
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 8.2e-39 164.5 144 50.7
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 1.1e-38 164.1 144 50.7
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 1.1e-38 164.1 144 49.3
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 1.1e-38 164.1 131 57.3
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 1.8e-38 163.3 136 52.9
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.8e-38 163.3 144 48.6
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.4e-38 162.9 131 55.7
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 5.3e-38 161.8 144 48.6
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 9.1e-38 161.0 144 47.9
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 2.6e-37 159.5 131 53.4
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 7.7e-37 157.9 131 52.7
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 1.7e-36 156.8 131 51.1
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 5.0e-36 155.2 147 46.3
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 1.9e-35 153.3 144 45.8
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 3.2e-35 152.5 143 51.7
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 7.2e-35 151.4 128 50.0
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 7.2e-35 151.4 129 55.8
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.6e-34 150.2 131 51.9
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 7.9e-34 147.9 136 46.3
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 6.7e-33 144.8 116 52.6
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 8.8e-33 144.4 144 47.2
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 3.7e-23 112.5 221 32.1
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 2.2e-20 103.2 123 40.7
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 2.9e-20 102.8 104 43.3
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 2.3e-17 93.2 140 35.7
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 1.0e-09 67.8 46 67.4
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 2.3e-09 66.6 146 32.9
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 1.2e-08 64.3 39 74.4


User provided reference genes

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