Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09299 Sequoiadendron giganteum HOM05D004109 ORTHO05D005867 8.1e-277 956.4 485 100.0
Hund27096 Selenicereus undatus HOM05D004109 ORTHO05D005867 1.5e-201 706.4 447 77.6
EL10Ac1g00099 Beta vulgaris HOM05D004109 ORTHO05D005867 4.3e-201 704.9 478 74.3
Duzib160G0240 Durio zibethinus HOM05D004109 ORTHO05D005867 4.3e-201 704.9 446 78.0
Gohir.D13G129300 Gossypium hirsutum HOM05D004109 ORTHO05D005867 9.5e-201 703.7 438 79.5
TAR369G0339 Trochodendron aralioides HOM05D004109 ORTHO05D005867 2.1e-200 702.6 452 76.5
Gorai.013G145300 Gossypium raimondii HOM05D004109 ORTHO05D005867 2.8e-200 702.2 438 79.5
MBI02_g14218_MAGBIO Magnolia biondii HOM05D004109 ORTHO05D005867 2.8e-200 702.2 441 78.0
Solyc02g071890.3 Solanum lycopersicum HOM05D004109 ORTHO05D005867 2.8e-200 702.2 441 78.0
CANSAT01G0468 Cannabis sativa HOM05D004109 ORTHO05D005867 6.2e-200 701.0 433 79.0
arahy.Tifrunner.gnm1.ann1.S2DTMZ Arachis hypogaea HOM05D004109 ORTHO05D005867 8.1e-200 700.7 430 79.3
Nn7g37134 Nelumbo nucifera HOM05D004109 ORTHO05D005867 8.1e-200 700.7 441 78.5
ATR0810G187 Amborella trichopoda HOM05D004109 ORTHO05D005867 1.1e-199 700.3 430 78.8
MSTRG.20474 Avicennia marina HOM05D004109 ORTHO05D005867 1.1e-199 700.3 434 78.8
Gohir.A13G125500 Gossypium hirsutum HOM05D004109 ORTHO05D005867 1.1e-199 700.3 438 79.0
Sopen02g020880 Solanum pennellii HOM05D004109 ORTHO05D005867 2.3e-199 699.1 430 79.3
Ciclev10015058m.g Citrus clementina HOM05D004109 ORTHO05D005867 3.1e-199 698.7 463 74.5
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 4.0e-199 698.4 430 79.1
AUR62000071 Chenopodium quinoa HOM05D004109 ORTHO05D005867 4.0e-199 698.4 430 79.1
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 5.2e-199 698.0 451 76.7
Nitab4.5_0001778g0190 Nicotiana tabacum HOM05D004109 ORTHO05D005867 5.2e-199 698.0 441 77.8
Prupe.4G091700 Prunus persica HOM05D004109 ORTHO05D005867 5.2e-199 698.0 458 75.1
FvH4_3g10270 Fragaria vesca HOM05D004109 ORTHO05D005867 8.9e-199 697.2 458 75.3
Ah.05g178270 Amaranthus hybridus HOM05D004109 ORTHO05D005867 1.2e-198 696.8 442 77.8
COL.COLO4_13719 Corchorus olitorius HOM05D004109 ORTHO05D005867 1.2e-198 696.8 440 77.7
Hma1.2p1_0892F.1_g233350 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 1.2e-198 696.8 433 79.2
Glyma.15G131700 Glycine max HOM05D004109 ORTHO05D005867 1.5e-198 696.4 433 79.2
GSVIVG01001692001 Vitis vinifera HOM05D004109 ORTHO05D005867 1.5e-198 696.4 431 78.2
PGR083G1643 Punica granatum HOM05D004109 ORTHO05D005867 3.4e-198 695.3 444 76.8
SGA_v2.0_scaffold114G32023 Striga asiatica HOM05D004109 ORTHO05D005867 4.4e-198 694.9 436 78.0
Lj7A233T12 Lonicera japonica HOM05D004109 ORTHO05D005867 5.8e-198 694.5 433 78.1
Manes.06G058300 Manihot esculenta HOM05D004109 ORTHO05D005867 5.8e-198 694.5 430 78.8
HPP92_000958 Vanilla planifolia HOM05D004109 ORTHO05D005867 5.8e-198 694.5 433 78.3
CAN.G411.27 Capsicum annuum HOM05D004109 ORTHO05D005867 9.9e-198 693.7 442 77.1
Cc02_g32120 Coffea canephora HOM05D004109 ORTHO05D005867 9.9e-198 693.7 438 76.9
Potri.001G465300 Populus trichocarpa HOM05D004109 ORTHO05D005867 9.9e-198 693.7 430 78.4
Atru.chr12.891 Acer truncatum HOM05D004109 ORTHO05D005867 1.3e-197 693.3 430 78.6
Migut.B01142 Erythranthe guttata HOM05D004109 ORTHO05D005867 1.3e-197 693.3 455 75.6
Eucgr.D00111 Eucalyptus grandis HOM05D004109 ORTHO05D005867 1.3e-197 693.3 431 78.0
Os01g0232700 Oryza sativa ssp. japonica HOM05D004109 ORTHO05D005867 1.3e-197 693.3 460 74.1
Duzib192G0069 Durio zibethinus HOM05D004109 ORTHO05D005867 1.7e-197 693.0 429 79.0
MD05G1271100 Malus domestica HOM05D004109 ORTHO05D005867 1.7e-197 693.0 430 78.6
RcHm_v2.0_Chr5g0016531 Rosa chinensis HOM05D004109 ORTHO05D005867 1.7e-197 693.0 430 78.6
arahy.Tifrunner.gnm1.ann1.E4EMQ7 Arachis hypogaea HOM05D004109 ORTHO05D005867 2.2e-197 692.6 455 76.0
Nitab4.5_0001793g0060 Nicotiana tabacum HOM05D004109 ORTHO05D005867 2.2e-197 692.6 441 76.9
Thecc.10G182100 Theobroma cacao HOM05D004109 ORTHO05D005867 2.2e-197 692.6 439 77.7
Sabra11G0141200 Salix brachista HOM05D004109 ORTHO05D005867 2.9e-197 692.2 442 76.7
ECA238G2995 Erigeron canadensis HOM05D004109 ORTHO05D005867 4.9e-197 691.4 458 74.7
MD10G1251700 Malus domestica HOM05D004109 ORTHO05D005867 4.9e-197 691.4 458 74.7
PSO675G5109 Papaver somniferum HOM05D004109 ORTHO05D005867 6.4e-197 691.0 433 77.4
Cfa002071 Carpinus fangiana HOM05D004109 ORTHO05D005867 8.3e-197 690.6 433 78.5
MELO3C002828.2 Cucumis melo HOM05D004109 ORTHO05D005867 8.3e-197 690.6 440 77.7
Rhsim07G0074000 Rhododendron simsii HOM05D004109 ORTHO05D005867 8.3e-197 690.6 433 77.8
ClCG03G008220 Citrullus lanatus HOM05D004109 ORTHO05D005867 1.1e-196 690.3 433 78.5
PSO675G4088 Papaver somniferum HOM05D004109 ORTHO05D005867 1.1e-196 690.3 464 73.7
Aqoxy7G00406 Aquilegia oxysepala HOM05D004109 ORTHO05D005867 1.9e-196 689.5 465 74.6
Potri.011G163400 Populus trichocarpa HOM05D004109 ORTHO05D005867 1.9e-196 689.5 464 74.4
CSS0030683 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 2.4e-196 689.1 426 79.3
CDE06G2252 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 2.4e-196 689.1 460 73.5
CsaV3_1G037190 Cucumis sativus L. HOM05D004109 ORTHO05D005867 2.4e-196 689.1 433 78.1
HanXRQChr07g0201181 Helianthus annuus HOM05D004109 ORTHO05D005867 2.4e-196 689.1 430 77.9
Cpa.g.sc139.36 Carica papaya HOM05D004109 ORTHO05D005867 5.4e-196 688.0 433 77.6
DCAR_003019 Daucus carota HOM05D004109 ORTHO05D005867 5.4e-196 688.0 431 75.9
Phvul.006G126900 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 5.4e-196 688.0 433 78.3
Lalb_Chr20g0120131 Lupinus albus HOM05D004109 ORTHO05D005867 7.1e-196 687.6 457 75.1
CiPaw.09G142500 Carya illinoinensis HOM05D004109 ORTHO05D005867 9.2e-196 687.2 444 76.6
Lsat_1_v5_gn_2_116541 Lactuca sativa HOM05D004109 ORTHO05D005867 9.2e-196 687.2 433 76.4
Ca_00854_v3 Cicer arietinum L. HOM05D004109 ORTHO05D005867 1.2e-195 686.8 461 75.7
Glyma.09G025600 Glycine max HOM05D004109 ORTHO05D005867 1.2e-195 686.8 433 78.5
Nitab4.5_0008572g0030 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.6e-195 686.4 433 77.8
Sed0019466 Sechium edule HOM05D004109 ORTHO05D005867 1.6e-195 686.4 433 77.8
Psat1g166680 Pisum sativum HOM05D004109 ORTHO05D005867 2.1e-195 686.0 432 78.2
Sed0002561 Sechium edule HOM05D004109 ORTHO05D005867 4.6e-195 684.9 433 77.4
THA.LOC104799477 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 4.6e-195 684.9 433 76.9
Medtr2g030520 Medicago truncatula HOM05D004109 ORTHO05D005867 6.0e-195 684.5 458 74.7
A06p30510 Brassica napus HOM05D004109 ORTHO05D005867 1.3e-194 683.3 455 73.4
BraA06t26000Z Brassica rapa HOM05D004109 ORTHO05D005867 1.3e-194 683.3 455 73.4
BcaB02g09768 Brassica carinata HOM05D004109 ORTHO05D005867 1.7e-194 682.9 455 73.8
BraA09t36495Z Brassica rapa HOM05D004109 ORTHO05D005867 1.7e-194 682.9 448 74.1
Thhalv10004035m.g Eutrema salsugineum HOM05D004109 ORTHO05D005867 1.7e-194 682.9 448 74.6
Lj6g0008240 Lotus japonicus HOM05D004109 ORTHO05D005867 1.7e-194 682.9 458 74.5
THA.LOC104810828 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 1.7e-194 682.9 433 77.1
A09p08450 Brassica napus HOM05D004109 ORTHO05D005867 2.3e-194 682.6 448 74.1
Aa31LG1G12300 Aethionema arabicum HOM05D004109 ORTHO05D005867 3.0e-194 682.2 452 74.3
C03p62550 Brassica napus HOM05D004109 ORTHO05D005867 3.9e-194 681.8 455 73.4
BolC3t18512H Brassica oleracea HOM05D004109 ORTHO05D005867 3.9e-194 681.8 455 73.4
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 3.9e-194 681.8 451 75.6
BcaC01g02640 Brassica carinata HOM05D004109 ORTHO05D005867 6.6e-194 681.0 455 73.4
FAN11G0285 Fragaria x ananassa HOM05D001785 ORTHO05D001933 6.6e-194 681.0 458 74.2
arahy.Tifrunner.gnm1.ann1.X3TBAN Arachis hypogaea HOM05D004109 ORTHO05D005867 1.5e-193 679.9 473 73.2
BcaNung04636 Brassica carinata HOM05D004109 ORTHO05D005867 1.5e-193 679.9 448 74.1
Glyma.08G081500 Glycine max HOM05D004109 ORTHO05D005867 4.3e-193 678.3 430 77.0
Lj4g0018356 Lotus japonicus HOM05D004109 ORTHO05D005867 4.3e-193 678.3 430 76.7
Carub.0008s2466 Capsella rubella HOM05D004109 ORTHO05D005867 1.2e-192 676.8 431 76.3
Sp2g26950 Schrenkiella parvula HOM05D004109 ORTHO05D005867 1.2e-192 676.8 447 74.3
AL8G41120 Arabidopsis lyrata HOM05D004109 ORTHO05D005867 1.6e-192 676.4 456 73.5
Phvul.002G198300 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 1.6e-192 676.4 430 76.7
AT5G63890 Arabidopsis thaliana HOM05D004109 ORTHO05D005867 2.1e-192 676.0 456 73.7
CARHR277790 Cardamine hirsuta HOM05D004109 ORTHO05D005867 3.6e-192 675.2 448 74.1
BcaC04g23349 Brassica carinata HOM05D004109 ORTHO05D005867 1.1e-191 673.7 448 73.7
BolC9t53868H Brassica oleracea HOM05D004109 ORTHO05D005867 1.1e-191 673.7 448 73.7
CDE03G0162 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 4.0e-191 671.8 437 74.6
Sabra16G0315800 Salix brachista HOM05D004109 ORTHO05D005867 5.2e-191 671.4 464 72.4
unitig_0.g2208 Utricularia gibba HOM05D004109 ORTHO05D005867 5.2e-191 671.4 430 75.3
C09p09570 Brassica napus HOM05D004109 ORTHO05D005867 6.8e-191 671.0 448 73.4
vmacro13807 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 2.4e-188 662.5 463 71.5
VMungo0540G0358 Vigna mungo HOM05D004109 ORTHO05D005867 4.1e-188 661.8 442 75.6
Cfa005415 Carpinus fangiana HOM05D004109 ORTHO05D005867 3.5e-187 658.7 441 74.8
QL08p023474 Quercus lobata HOM05D004109 ORTHO05D005867 6.0e-187 657.9 458 71.8
RcHm_v2.0_Chr7g0241131 Rosa chinensis HOM05D004109 ORTHO05D005867 3.0e-186 655.6 468 71.4
FAN21G0038 Fragaria x ananassa HOM05D001785 ORTHO05D001933 1.1e-185 653.7 458 71.8
Pp3c25_2460 Physcomitrium patens HOM05D004109 ORTHO05D005867 4.3e-185 651.7 452 70.1
FAN25G1737 Fragaria x ananassa HOM05D001785 ORTHO05D001933 2.8e-184 649.0 458 71.4
Sc26g0000620 Simmondsia chinensis HOM05D004109 ORTHO05D005867 1.1e-183 647.1 404 78.5
Mapoly0060s0093 Marchantia polymorpha HOM05D004109 ORTHO05D005867 1.4e-183 646.7 443 72.2
FAN16G0137 Fragaria x ananassa HOM05D001785 ORTHO05D001933 2.4e-183 646.0 458 71.2
TWI63G1440 Tripterygium wilfordii HOM05D004109 ORTHO05D005867 9.9e-182 640.6 452 71.5
Pp3c16_4820 Physcomitrium patens HOM05D004109 ORTHO05D005867 3.2e-180 635.6 436 71.8
CBR_g8928 Chara braunii HOM05D004109 ORTHO05D005867 1.6e-179 633.3 460 69.6
SMO137G0061 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 2.3e-178 629.4 427 73.8
AagrBONN_evm.TU.Sc2ySwM_228.1565 Anthoceros agrestis HOM05D004109 ORTHO05D005867 8.7e-178 627.5 467 67.2
Nitab4.5_0003703g0080 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.5e-177 626.7 381 80.6
Cre02.g077350 Chlamydomonas reinhardtii HOM05D004109 ORTHO05D005867 6.4e-173 611.3 428 71.5
BcaNung04631 Brassica carinata HOM05D004109 ORTHO05D005867 2.7e-171 605.9 430 70.7
PRCOL_00002586 Prasinoderma coloniale HOM05D004109 ORTHO05D005867 6.7e-162 574.7 429 66.2
MCO06G190 Micromonas commoda HOM05D004109 ORTHO05D005867 3.7e-160 568.9 428 67.1
AUR62019245 Chenopodium quinoa HOM05D004109 ORTHO05D005867 8.2e-152 541.2 349 75.6
vmacro23219 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 6.5e-149 531.6 488 60.2
CSS0014434 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 4.7e-139 498.8 318 76.7
Dinv23908 Davidia involucrata HOM05D004109 ORTHO05D005867 1.7e-136 490.3 315 75.9
SMO170G0053 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 7.7e-118 428.3 330 68.2
Cfa023091 Carpinus fangiana HOM05D004109 ORTHO05D005867 1.6e-115 420.6 470 48.5
Zm00001eb059830 Zea mays HOM05D004109 ORTHO05D005867 1.4e-114 417.5 287 72.5
TPR.G26361 Trifolium pratense HOM05D004109 ORTHO05D005867 1.1e-111 407.9 259 77.2
Haze_16420 Corylus avellana HOM05D004109 ORTHO05D005867 2.9e-109 399.8 313 66.5
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 1.9e-108 397.1 264 73.5
Peaxi162Scf00112g01722 Petunia axillaris HOM05D004109 ORTHO05D005867 2.3e-106 390.2 230 83.5
Migut.B01141 Erythranthe guttata HOM05D004109 ORTHO05D005867 3.5e-86 323.2 396 49.7
Peaxi162Scf00112g01719 Petunia axillaris HOM05D004109 ORTHO05D005867 1.2e-81 308.1 233 67.0
Actinidia34688 Actinidia chinensis HOM05D004109 ORTHO05D005867 2.2e-80 303.9 201 73.1
Haze_01914 Corylus avellana HOM05D004109 ORTHO05D005867 2.8e-75 287.0 173 80.9
VMungo0251G3018 Vigna mungo HOM05D004109 ORTHO05D005867 3.6e-75 286.6 174 79.3
PSO675G6350 Papaver somniferum HOM05D004109 ORTHO05D005867 1.2e-70 271.6 182 72.0
Haze_27135 Corylus avellana HOM05D004109 ORTHO05D005867 5.6e-68 262.7 420 40.7
Haze_01911 Corylus avellana HOM05D004109 ORTHO05D001172 3.1e-66 256.9 230 58.7
Lsat_1_v5_gn_0_46200 Lactuca sativa HOM05D004109 ORTHO05D005867 2.1e-62 244.2 294 46.9
BolC8t51924H Brassica oleracea HOM05D004109 ORTHO05D005867 5.1e-61 239.6 220 58.6
C01p45280 Brassica napus HOM05D004109 ORTHO05D005867 1.6e-59 234.6 214 59.3
C03p60030 Brassica napus HOM05D004109 ORTHO05D005867 2.1e-59 234.2 283 49.1
BolC3t15408H Brassica oleracea HOM05D004109 ORTHO05D005867 4.5e-57 226.5 211 57.8
BcaC01g02810 Brassica carinata HOM05D004109 ORTHO05D005867 5.1e-53 213.0 212 54.2
TPR.G39866 Trifolium pratense HOM05D004109 ORTHO05D005867 5.3e-50 203.0 117 82.9
CSS0037475 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 1.8e-45 188.0 117 76.9
SMO137G0105 Selaginella moellendorffii HOM05D004109 ORTHO05D019780 2.1e-43 181.0 188 56.4
PGSC0003DMG400028409 Solanum tuberosum HOM05D004109 ORTHO05D005867 9.7e-36 155.6 82 87.8
CSS0025757 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 2.2e-35 154.5 86 84.9
Lsat_1_v5_gn_0_43980 Lactuca sativa HOM05D004109 ORTHO05D005867 6.3e-27 126.3 132 48.5
vmacro20533 Vaccinium macrocarpon HOM05D004109 ORTHO05D000800 3.4e-25 120.6 162 42.6
Lsat_1_v5_gn_2_130860 Lactuca sativa HOM05D004109 ORTHO05D019780 1.8e-21 108.2 67 80.6
HanXRQChr17g0545961 Helianthus annuus HOM05D004109 ORTHO05D225632 1.7e-19 101.7 112 45.5
vmacro20532 Vaccinium macrocarpon HOM05D004109 ORTHO05D426529 2.2e-19 101.3 136 43.4
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 4.8e-19 100.1 125 47.2
Hma1.2p1_0258F.1_g104030 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 1.0e-16 92.4 55 81.8
PSO063G0645 Papaver somniferum HOM05D004109 ORTHO05D019780 8.5e-16 89.4 57 77.2
vmacro20529 Vaccinium macrocarpon HOM05D004109 ORTHO05D427059 2.5e-15 87.8 77 54.5
AagrBONN_evm.TU.Sc2ySwM_117.3019 Anthoceros agrestis HOM05D000719 ORTHO05D000569 5.5e-15 86.7 66 66.7
BcaC09g48845 Brassica carinata HOM05D004109 ORTHO05D009034 9.4e-15 85.9 79 55.7
arahy.Tifrunner.gnm1.ann1.P7LCDJ Arachis hypogaea HOM05D004109 ORTHO05D019780 2.6e-12 77.8 48 83.3
BolC3t18267H Brassica oleracea HOM05D004109 ORTHO05D019780 9.7e-12 75.9 115 44.3
arahy.Tifrunner.gnm1.ann1.V2D64V Arachis hypogaea HOM05D004109 ORTHO05D019780 1.7e-11 75.1 69 63.8
BolC3t18268H Brassica oleracea HOM05D004109 ORTHO05D005867 6.3e-11 73.2 42 78.6
Actinidia02690 Actinidia chinensis HOM05D004109 ORTHO05D054316 5.3e-10 70.1 58 56.9
vmacro09568 Vaccinium macrocarpon HOM05D004109 ORTHO05D003511 5.3e-10 70.1 72 56.9
Glyma.20G022700 Glycine max HOM05D004109 ORTHO05D019780 1.6e-09 68.6 37 94.6
Zm00001eb213480 Zea mays HOM05D002921 ORTHO05D003258 3.2e-07 60.8 86 43.0
SMO137G0306 Selaginella moellendorffii HOM05D004109 ORTHO05D377039 6.1e-06 56.6 31 80.6


User provided reference genes

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