Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 9.6e-305 1049.3 506 100.0
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 2.7e-206 722.2 496 67.5
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 3.5e-206 721.8 500 68.8
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 6.0e-206 721.1 497 69.0
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 3.0e-205 718.8 475 69.7
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 8.7e-205 717.2 475 69.7
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 3.3e-204 715.3 496 67.5
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 5.6e-204 714.5 497 68.0
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 5.6e-204 714.5 480 67.9
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 1.6e-203 713.0 479 68.7
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 4.8e-203 711.4 494 67.2
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 1.8e-202 709.5 504 66.1
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 3.1e-202 708.8 479 68.5
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 4.0e-202 708.4 479 68.5
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 4.0e-202 708.4 483 68.1
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 5.3e-202 708.0 508 66.7
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 2.6e-201 705.7 499 65.5
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 3.4e-201 705.3 494 67.0
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 5.8e-201 704.5 495 67.5
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 7.6e-201 704.1 485 67.6
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.7e-200 703.0 479 67.6
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 4.9e-200 701.4 491 67.8
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 8.4e-200 700.7 494 66.2
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 1.1e-199 700.3 472 68.4
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 1.4e-199 699.9 492 66.3
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.4e-199 699.1 489 67.7
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 5.4e-199 698.0 492 67.1
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 7.1e-199 697.6 473 68.3
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 2.1e-198 696.0 495 65.9
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 2.7e-198 695.7 494 67.4
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 6.0e-198 694.5 497 66.8
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 7.9e-198 694.1 494 67.0
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 7.9e-198 694.1 477 67.1
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 7.9e-198 694.1 494 65.8
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.0e-197 693.7 477 67.1
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.3e-197 693.3 493 67.3
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.8e-197 693.0 495 65.7
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 1.8e-197 693.0 498 66.3
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 2.3e-197 692.6 471 68.4
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 2.3e-197 692.6 498 65.7
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.3e-197 692.6 475 66.7
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 5.1e-197 691.4 497 66.2
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 6.7e-197 691.0 506 65.4
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 6.7e-197 691.0 495 66.3
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.1e-196 690.3 493 66.1
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 1.1e-196 690.3 496 65.7
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 1.5e-196 689.9 491 65.6
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 1.9e-196 689.5 503 64.0
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 9.6e-196 687.2 489 66.9
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 2.8e-195 685.6 491 65.0
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 6.2e-195 684.5 493 66.7
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 8.1e-195 684.1 476 67.6
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 2.4e-194 682.6 492 66.7
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 3.1e-194 682.2 493 65.5
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 3.1e-194 682.2 497 65.6
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 5.3e-194 681.4 499 64.5
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 6.9e-194 681.0 491 66.6
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 6.9e-194 681.0 476 67.9
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 6.9e-194 681.0 544 61.0
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 6.9e-194 681.0 489 65.8
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 5.8e-193 677.9 463 67.6
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 4.9e-192 674.9 475 65.3
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 8.4e-192 674.1 505 62.8
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 8.4e-192 674.1 499 63.5
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 9.3e-191 670.6 502 63.9
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.6e-190 669.8 477 65.2
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 3.5e-190 668.7 472 66.9
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.8e-189 666.4 472 66.7
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.1e-187 659.4 464 66.4
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 2.1e-187 659.4 492 63.8
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 2.8e-187 659.1 475 63.4
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.8e-186 656.4 501 63.1
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 2.4e-186 656.0 493 63.9
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.4e-186 656.0 501 63.1
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 5.3e-186 654.8 493 63.5
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 9.0e-186 654.1 445 67.4
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.2e-184 649.4 449 66.4
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 6.5e-184 647.9 475 63.6
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 3.2e-183 645.6 499 62.7
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 7.1e-183 644.4 495 62.4
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 1.6e-182 643.3 475 63.6
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 1.6e-182 643.3 495 62.6
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 6.1e-182 641.3 492 62.2
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 6.1e-182 641.3 495 62.0
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 6.1e-182 641.3 495 62.0
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 3.3e-180 635.6 451 66.1
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 1.3e-179 633.6 481 62.8
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.6e-179 633.3 489 62.4
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 2.2e-179 632.9 464 66.2
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 5.9e-177 624.8 498 61.8
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 6.5e-176 621.3 546 57.9
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 9.4e-175 617.5 502 59.8
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.2e-174 617.1 503 59.0
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 4.3e-172 608.6 498 58.2
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 1.4e-170 603.6 483 60.7
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 3.6e-158 562.4 493 57.2
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 1.5e-140 503.8 376 64.1
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 4.0e-133 479.2 368 63.3
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 8.3e-131 471.5 333 63.4
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 4.1e-130 469.2 332 64.5
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 1.6e-126 457.2 334 63.2
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.2e-105 387.9 480 45.4
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.0e-101 372.9 279 62.4
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.8e-100 369.0 311 56.3
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 7.1e-98 362.1 232 67.7
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 7.9e-89 332.0 214 66.8
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.6e-65 254.6 172 70.3
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 1.9e-63 247.7 183 60.7
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 2.6e-60 237.3 148 68.9
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 3.6e-57 226.9 155 70.3
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 6.3e-22 109.8 86 68.6
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 3.3e-18 97.4 104 51.0
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 5.0e-11 73.6 51 60.8
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 7.5e-07 59.7 79 39.2


User provided reference genes

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