Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.3e-114 416.4 209 100.0
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 1.9e-60 236.5 195 62.1
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 7.0e-60 234.6 195 62.1
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 5.1e-58 228.4 196 60.7
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 1.1e-57 227.3 195 60.0
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 1.1e-57 227.3 196 59.7
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 1.9e-57 226.5 196 59.7
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 2.5e-57 226.1 196 60.2
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 2.5e-57 226.1 209 58.9
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 4.3e-57 225.3 195 60.0
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 5.6e-57 224.9 196 58.7
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 5.6e-57 224.9 195 60.0
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 5.6e-57 224.9 209 57.9
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 9.5e-57 224.2 195 59.5
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 1.2e-56 223.8 196 58.7
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.6e-56 223.4 196 59.7
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 1.6e-56 223.4 182 62.1
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 1.6e-56 223.4 195 59.5
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 2.8e-56 222.6 196 58.2
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 4.7e-56 221.9 195 59.5
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 4.7e-56 221.9 196 59.7
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 6.2e-56 221.5 187 58.8
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 6.2e-56 221.5 196 57.7
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 6.2e-56 221.5 195 58.5
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 8.1e-56 221.1 196 58.7
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 1.4e-55 220.3 196 57.1
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 1.8e-55 219.9 196 56.6
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 2.3e-55 219.5 196 55.6
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 4.0e-55 218.8 197 58.4
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 5.2e-55 218.4 196 57.1
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 5.2e-55 218.4 196 57.7
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 5.2e-55 218.4 196 56.1
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 6.8e-55 218.0 196 56.6
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 6.8e-55 218.0 196 58.7
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 6.8e-55 218.0 196 56.6
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 8.9e-55 217.6 196 54.6
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 8.9e-55 217.6 196 56.1
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 1.5e-54 216.9 177 61.6
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 1.5e-54 216.9 196 57.1
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 2.0e-54 216.5 196 56.6
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 2.0e-54 216.5 196 55.6
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 2.0e-54 216.5 195 57.4
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 2.6e-54 216.1 196 56.1
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 3.4e-54 215.7 196 56.6
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 4.4e-54 215.3 182 61.0
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 5.8e-54 214.9 197 57.4
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 7.5e-54 214.5 178 60.7
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 9.9e-54 214.2 196 54.1
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 2.9e-53 212.6 178 61.8
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 3.7e-53 212.2 197 57.9
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 3.7e-53 212.2 197 56.9
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 4.9e-53 211.8 196 55.6
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 4.9e-53 211.8 181 57.5
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 6.4e-53 211.5 197 56.3
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 6.4e-53 211.5 178 60.1
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 8.3e-53 211.1 195 56.9
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 8.3e-53 211.1 197 55.3
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 8.3e-53 211.1 197 55.8
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 8.3e-53 211.1 195 56.4
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 1.4e-52 210.3 177 62.1
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 1.9e-52 209.9 179 59.8
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 1.9e-52 209.9 196 55.6
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 2.4e-52 209.5 180 60.6
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 3.2e-52 209.1 178 58.4
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 3.2e-52 209.1 197 52.3
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 3.2e-52 209.1 220 51.8
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 4.1e-52 208.8 196 54.6
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 7.1e-52 208.0 221 51.1
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 2.7e-51 206.1 197 53.3
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 3.5e-51 205.7 185 58.4
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 3.5e-51 205.7 197 55.8
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 6.0e-51 204.9 197 53.3
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 7.8e-51 204.5 178 56.7
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 7.8e-51 204.5 219 48.9
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 7.8e-51 204.5 196 54.1
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 1.3e-50 203.8 178 56.7
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 1.3e-50 203.8 197 56.3
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 8.6e-50 201.1 178 56.2
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 8.6e-50 201.1 178 56.2
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 8.6e-50 201.1 178 56.2
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 8.6e-50 201.1 209 52.6
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 1.9e-49 199.9 178 56.2
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 2.5e-49 199.5 178 56.2
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 5.6e-49 198.4 178 59.0
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 7.3e-49 198.0 178 55.6
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 3.6e-48 195.7 196 51.5
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 1.1e-47 194.1 178 55.6
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.4e-47 193.7 179 52.5
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 5.2e-47 191.8 181 56.4
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 5.8e-46 188.3 148 64.9
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 1.7e-45 186.8 176 56.2
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 3.8e-45 185.7 158 59.5
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.9e-45 185.3 165 57.6
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.1e-44 184.1 165 57.6
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.4e-44 183.7 165 57.0
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 4.2e-44 182.2 162 58.6
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 5.4e-44 181.8 161 55.3
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 7.1e-44 181.4 197 49.7
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 7.1e-44 181.4 165 55.8
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 7.1e-44 181.4 158 60.1
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 4.6e-43 178.7 200 50.5
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 6.0e-43 178.3 164 54.3
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.7e-42 176.8 197 51.3
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 8.1e-40 167.9 166 53.6
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 1.4e-39 167.2 157 54.8
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 1.5e-38 163.7 185 48.1
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 5.8e-38 161.8 239 45.6
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.7e-37 160.2 123 65.0
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.7e-34 150.2 151 50.3
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 2.5e-25 119.8 147 43.5
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 5.7e-17 92.0 120 45.0
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 2.2e-13 80.1 175 31.4


User provided reference genes

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