Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09228 Sequoiadendron giganteum HOM05D001348 ORTHO05D008393 1.6e-137 492.7 234 100.0
SEGI_15925 Sequoiadendron giganteum HOM05D001348 ORTHO05D008393 2.0e-127 459.1 217 100.0
TAR624G0107 Trochodendron aralioides HOM05D001348 ORTHO05D008393 7.1e-85 317.8 210 67.1
GSVIVG01037695001 Vitis vinifera HOM05D001348 ORTHO05D008393 3.5e-84 315.5 210 67.6
CSS0015657 Camellia sinensis var. sinensis HOM05D001348 ORTHO05D008393 2.3e-83 312.8 212 66.5
CSS0031743 Camellia sinensis var. sinensis HOM05D001348 ORTHO05D008393 3.0e-83 312.4 212 66.5
Nn1g07231 Nelumbo nucifera HOM05D001348 ORTHO05D008393 5.1e-83 311.6 211 66.8
vmacro09698 Vaccinium macrocarpon HOM05D001348 ORTHO05D008393 1.9e-82 309.7 212 66.0
ATR0712G161 Amborella trichopoda HOM05D001348 ORTHO05D008393 4.3e-82 308.5 210 67.6
Dinv40782 Davidia involucrata HOM05D001348 ORTHO05D008393 4.8e-81 305.1 212 64.2
MBI10_g29397_MAGBIO Magnolia biondii HOM05D001348 ORTHO05D008393 8.1e-81 304.3 210 65.7
Actinidia10744 Actinidia chinensis HOM05D001348 ORTHO05D008393 1.8e-80 303.1 212 66.0
RhsimUnG0248600 Rhododendron simsii HOM05D001348 ORTHO05D008393 6.9e-80 301.2 212 65.6
MSTRG.14452 Avicennia marina HOM05D001348 ORTHO05D008393 2.6e-79 299.3 212 62.7
Manes.03G133300 Manihot esculenta HOM05D001348 ORTHO05D008393 2.6e-79 299.3 212 64.2
Lj1C878T2 Lonicera japonica HOM05D001348 ORTHO05D008393 4.5e-79 298.5 210 63.8
Thecc.07G031600 Theobroma cacao HOM05D001348 ORTHO05D008393 1.3e-78 297.0 212 62.7
PGR031G0282 Punica granatum HOM05D001348 ORTHO05D008393 2.2e-78 296.2 212 62.3
QL08p008747 Quercus lobata HOM05D001348 ORTHO05D008393 6.4e-78 294.7 210 63.3
QL09p024307 Quercus lobata HOM05D001348 ORTHO05D008393 6.4e-78 294.7 210 63.3
SGA_v2.0_scaffold363G49944 Striga asiatica HOM05D001348 ORTHO05D008393 8.4e-78 294.3 212 60.8
Cpa.g.sc12.269 Carica papaya HOM05D001348 ORTHO05D008393 1.1e-77 293.9 209 62.7
Duzib213G0150 Durio zibethinus HOM05D001348 ORTHO05D008393 2.4e-77 292.7 212 62.7
ClCG09G010970 Citrullus lanatus HOM05D001348 ORTHO05D008393 4.2e-77 292.0 212 61.3
FvH4_3g23220 Fragaria vesca HOM05D001348 ORTHO05D008393 7.1e-77 291.2 212 63.7
FAN16G1777 Fragaria x ananassa HOM05D001348 ORTHO05D008393 7.1e-77 291.2 212 63.7
Aqoxy1G03056 Aquilegia oxysepala HOM05D001348 ORTHO05D008393 1.2e-76 290.4 210 61.4
FAN21G3120 Fragaria x ananassa HOM05D001348 ORTHO05D008393 1.2e-76 290.4 212 63.7
FAN25G0826 Fragaria x ananassa HOM05D001348 ORTHO05D008393 1.6e-76 290.0 210 63.8
CANSAT78G2496 Cannabis sativa HOM05D001348 ORTHO05D008393 2.1e-76 289.7 212 63.2
MELO3C013141.2 Cucumis melo HOM05D001348 ORTHO05D008393 2.1e-76 289.7 212 60.8
FAN25G0105 Fragaria x ananassa HOM05D001348 ORTHO05D008393 2.1e-76 289.7 212 63.2
Prupe.4G219000 Prunus persica HOM05D001348 ORTHO05D008393 2.1e-76 289.7 212 62.3
ECA240G2960 Erigeron canadensis HOM05D001348 ORTHO05D008393 2.7e-76 289.3 213 60.1
CDE04G2814 Ceratophyllum demersum HOM05D001348 ORTHO05D008393 3.5e-76 288.9 210 61.4
Gohir.D05G373100 Gossypium hirsutum HOM05D001348 ORTHO05D008393 3.5e-76 288.9 212 61.3
Gorai.009G441800 Gossypium raimondii HOM05D001348 ORTHO05D008393 3.5e-76 288.9 212 61.3
MD11G1212700 Malus domestica HOM05D001348 ORTHO05D008393 6.0e-76 288.1 212 62.3
RcHm_v2.0_Chr5g0040901 Rosa chinensis HOM05D001348 ORTHO05D008393 6.0e-76 288.1 212 63.2
DCAR_016718 Daucus carota HOM05D001348 ORTHO05D008393 7.9e-76 287.7 215 62.3
Cc05_g14070 Coffea canephora HOM05D001348 ORTHO05D008393 1.0e-75 287.3 212 60.4
CsaV3_7G021990 Cucumis sativus L. HOM05D001348 ORTHO05D008393 2.3e-75 286.2 211 59.7
Gohir.A04G012800 Gossypium hirsutum HOM05D001348 ORTHO05D008393 3.0e-75 285.8 212 60.8
CiPaw.11G192600 Carya illinoinensis HOM05D001348 ORTHO05D008393 5.1e-75 285.0 214 60.7
Lsat_1_v5_gn_9_92360 Lactuca sativa HOM05D001348 ORTHO05D008393 5.1e-75 285.0 210 60.5
PSO478G3826 Papaver somniferum HOM05D001348 ORTHO05D008393 5.1e-75 285.0 210 60.5
Haze_09716 Corylus avellana HOM05D001348 ORTHO05D008393 8.7e-75 284.3 213 59.6
Nitab4.5_0008150g0010 Nicotiana tabacum HOM05D001348 ORTHO05D008393 1.5e-74 283.5 211 60.2
Solyc07g064830.3 Solanum lycopersicum HOM05D001348 ORTHO05D008393 1.9e-74 283.1 212 59.0
Sopen07g033020 Solanum pennellii HOM05D001348 ORTHO05D008393 2.5e-74 282.7 212 58.5
AT3G20440 Arabidopsis thaliana HOM05D001348 ORTHO05D008393 3.3e-74 282.3 212 59.9
Sed0016477 Sechium edule HOM05D001348 ORTHO05D008393 3.3e-74 282.3 212 59.4
AL219U10030 Arabidopsis lyrata HOM05D001348 ORTHO05D008393 4.3e-74 282.0 212 59.9
COL.COLO4_09699 Corchorus olitorius HOM05D001348 ORTHO05D008393 5.6e-74 281.6 212 59.4
Potri.001G359200 Populus trichocarpa HOM05D001348 ORTHO05D008393 5.6e-74 281.6 213 60.6
AL3G34160 Arabidopsis lyrata HOM05D001348 ORTHO05D008393 2.1e-73 279.6 212 59.4
Ciclev10007401m.g Citrus clementina HOM05D001348 ORTHO05D008393 2.1e-73 279.6 212 57.5
Peaxi162Scf00235g00519 Petunia axillaris HOM05D001348 ORTHO05D008393 2.8e-73 279.3 212 58.5
CARHR096150 Cardamine hirsuta HOM05D001348 ORTHO05D008393 4.8e-73 278.5 212 59.0
Eucgr.F03487 Eucalyptus grandis HOM05D001348 ORTHO05D008393 6.2e-73 278.1 212 58.5
arahy.Tifrunner.gnm1.ann1.IC3HGI Arachis hypogaea HOM05D001348 ORTHO05D008393 1.1e-72 277.3 218 59.2
arahy.Tifrunner.gnm1.ann1.QR17ZP Arachis hypogaea HOM05D001348 ORTHO05D008393 1.1e-72 277.3 218 59.2
Carub.0003s2038 Capsella rubella HOM05D001348 ORTHO05D008393 1.8e-72 276.6 212 59.0
Hund02021 Selenicereus undatus HOM05D001348 ORTHO05D008393 1.8e-72 276.6 212 59.4
Thhalv10020019m.g Eutrema salsugineum HOM05D001348 ORTHO05D008393 2.4e-72 276.2 212 59.0
TWI38G1719 Tripterygium wilfordii HOM05D001348 ORTHO05D008393 2.4e-72 276.2 214 60.7
Nitab4.5_0000328g0120 Nicotiana tabacum HOM05D001348 ORTHO05D008393 3.1e-72 275.8 212 58.5
BcaC05g28331 Brassica carinata HOM05D001348 ORTHO05D008393 5.3e-72 275.0 212 58.5
A05p28460 Brassica napus HOM05D001348 ORTHO05D008393 5.3e-72 275.0 212 58.5
C05p43900 Brassica napus HOM05D001348 ORTHO05D008393 5.3e-72 275.0 212 58.5
BolC5t33106H Brassica oleracea HOM05D001348 ORTHO05D008393 5.3e-72 275.0 212 58.5
BraA05t21725Z Brassica rapa HOM05D001348 ORTHO05D008393 5.3e-72 275.0 212 58.5
THA.LOC104817860 Tarenaya hassleriana HOM05D001348 ORTHO05D008393 5.3e-72 275.0 210 57.6
BcaB06g26109 Brassica carinata HOM05D001348 ORTHO05D008393 9.0e-72 274.2 212 58.0
AUR62020390 Chenopodium quinoa HOM05D001348 ORTHO05D008393 9.0e-72 274.2 209 62.2
Ca_26139_v3 Cicer arietinum L. HOM05D001348 ORTHO05D008393 9.0e-72 274.2 210 60.5
Migut.H01807 Erythranthe guttata HOM05D001348 ORTHO05D008393 1.2e-71 273.9 213 57.7
Sp3g18450 Schrenkiella parvula HOM05D001348 ORTHO05D008393 1.5e-71 273.5 212 58.0
Medtr3g053220 Medicago truncatula HOM05D001348 ORTHO05D008393 2.6e-71 272.7 210 60.0
Ah.04g166040 Amaranthus hybridus HOM05D001348 ORTHO05D008393 3.4e-71 272.3 210 60.5
AUR62015829 Chenopodium quinoa HOM05D001348 ORTHO05D008393 4.5e-71 271.9 209 61.7
TPR.G14440 Trifolium pratense HOM05D001348 ORTHO05D008393 4.5e-71 271.9 210 60.0
Aa31LG8G7250 Aethionema arabicum HOM05D001348 ORTHO05D008393 1.3e-70 270.4 212 57.5
Psat5g173680 Pisum sativum HOM05D001348 ORTHO05D008393 2.9e-70 269.2 210 60.0
EL10Ac4g07758 Beta vulgaris HOM05D001348 ORTHO05D008393 3.8e-70 268.9 218 57.8
HPP92_025429 Vanilla planifolia HOM05D001348 ORTHO05D008393 1.1e-69 267.3 212 59.9
Sc16g0005840 Simmondsia chinensis HOM05D001348 ORTHO05D008393 1.9e-69 266.5 212 56.6
Lj6g0019683 Lotus japonicus HOM05D001348 ORTHO05D008393 9.3e-69 264.2 210 60.0
Lalb_Chr15g0081511 Lupinus albus HOM05D001348 ORTHO05D008393 1.2e-68 263.8 212 58.5
Os06g0367100 Oryza sativa ssp. japonica HOM05D001348 ORTHO05D008393 7.9e-68 261.2 212 54.7
VMungo0540G0045 Vigna mungo HOM05D001348 ORTHO05D008393 1.0e-67 260.8 210 57.6
Phvul.006G047000 Phaseolus vulgaris HOM05D001348 ORTHO05D008393 1.3e-67 260.4 210 56.2
unitig_747.g21692 Utricularia gibba HOM05D001348 ORTHO05D008393 7.4e-66 254.6 217 52.1
Glyma.18G092600 Glycine max HOM05D001348 ORTHO05D008393 1.3e-65 253.8 210 54.8
Zm00001eb357830 Zea mays HOM05D001348 ORTHO05D008393 2.0e-63 246.5 212 52.8
SMO361G0691 Selaginella moellendorffii HOM05D001348 ORTHO05D008393 9.6e-58 227.6 223 53.8
HanXRQChr03g0076721 Helianthus annuus HOM05D001348 ORTHO05D008393 2.2e-54 216.5 212 48.1
AagrBONN_evm.TU.Sc2ySwM_368.3367 Anthoceros agrestis HOM05D001348 ORTHO05D008393 3.3e-50 202.6 219 49.3
Pp3c1_1810 Physcomitrium patens HOM05D001348 ORTHO05D008393 4.8e-49 198.7 246 43.9
Mapoly0160s0012 Marchantia polymorpha HOM05D001348 ORTHO05D008393 2.1e-44 183.3 285 39.3
CAN.G337.70 Capsicum annuum HOM05D001348 ORTHO05D008393 7.2e-37 158.3 124 56.5
Cc05_g15390 Coffea canephora HOM05D001348 ORTHO05D008393 5.9e-23 112.1 92 53.3
DCAR_031790 Daucus carota HOM05D001348 ORTHO05D008393 2.3e-14 83.6 44 77.3
CBR_g40635 Chara braunii HOM05D001348 ORTHO05D008393 8.8e-11 71.6 49 61.2
Actinidia33711 Actinidia chinensis HOM05D001348 ORTHO05D008393 3.5e-07 59.7 67 46.3


User provided reference genes

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