Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09183 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 0.0e+00 1795.8 881 100.0
SEGI_03843 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 5.1e-293 1011.1 495 99.8
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 7.3e-66 256.5 716 30.4
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 2.3e-59 235.0 548 32.1
ATR0681G222 Amborella trichopoda HOM05D005395 ORTHO05D006352 1.5e-55 222.2 563 29.7
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 1.1e-53 216.1 467 32.3
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 4.2e-53 214.2 522 30.7
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 1.7e-51 208.8 581 29.9
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 3.0e-51 208.0 645 27.6
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 6.6e-51 206.8 535 29.5
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 4.3e-50 204.1 486 31.1
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 5.6e-50 203.8 556 27.9
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 7.3e-50 203.4 491 31.2
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 1.3e-49 202.6 575 28.3
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 2.8e-49 201.4 612 27.6
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 1.4e-48 199.1 583 28.6
Hma1.2p1_0293F.1_g116170 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 3.1e-48 198.0 237 43.9
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 6.9e-48 196.8 555 27.9
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 9.0e-48 196.4 701 24.8
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 9.0e-48 196.4 591 28.1
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 9.0e-48 196.4 229 45.4
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 9.9e-47 193.0 487 30.4
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 8.4e-46 189.9 697 26.4
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 8.4e-46 189.9 643 27.2
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 1.1e-45 189.5 321 38.6
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 1.1e-45 189.5 368 35.3
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 1.1e-45 189.5 238 44.5
vmacro19894 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 1.4e-45 189.1 428 31.5
Atru.chr11.730 Acer truncatum HOM05D005395 ORTHO05D006352 4.2e-45 187.6 240 42.1
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 4.2e-45 187.6 572 27.4
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 4.2e-45 187.6 261 38.7
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 5.4e-45 187.2 241 40.7
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 7.1e-45 186.8 230 43.0
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 7.1e-45 186.8 262 38.5
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 2.1e-44 185.3 283 38.9
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 2.1e-44 185.3 230 40.4
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 6.7e-43 180.3 252 41.7
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 1.5e-42 179.1 231 39.4
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 1.5e-42 179.1 310 33.9
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 2.5e-42 178.3 569 28.1
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 3.3e-42 177.9 250 38.0
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 5.6e-42 177.2 302 36.1
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 5.6e-42 177.2 302 36.1
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 5.6e-42 177.2 507 27.6
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 7.4e-42 176.8 302 36.1
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 7.4e-42 176.8 296 35.1
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 9.6e-42 176.4 253 39.5
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 9.6e-42 176.4 338 36.4
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 1.6e-41 175.6 283 36.4
CsaV3_3G032200 Cucumis sativus L. HOM05D005395 ORTHO05D006352 2.8e-41 174.9 339 32.7
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 2.8e-41 174.9 241 39.8
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 2.8e-41 174.9 244 39.8
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 8.1e-41 173.3 226 41.6
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 8.1e-41 173.3 546 26.4
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 1.1e-40 172.9 230 40.4
Lalb_Chr13g0291141 Lupinus albus HOM05D005395 ORTHO05D006352 1.2e-39 169.5 292 35.3
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 1.5e-39 169.1 223 38.6
SHI19147 Sapria himalayana HOM05D005395 ORTHO05D006352 1.5e-39 169.1 261 38.7
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 2.0e-39 168.7 230 40.0
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 2.0e-39 168.7 239 36.0
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 2.0e-39 168.7 239 36.0
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 2.6e-39 168.3 336 35.1
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 7.6e-39 166.8 252 37.7
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 9.9e-39 166.4 292 36.0
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 1.7e-38 165.6 237 38.4
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 2.2e-38 165.2 259 38.6
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 3.8e-38 164.5 239 36.0
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 8.4e-38 163.3 587 27.1
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 1.6e-36 159.1 336 33.6
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 6.0e-36 157.1 236 36.4
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 6.7e-35 153.7 262 35.1
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 1.5e-34 152.5 230 36.1
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 3.3e-34 151.4 262 34.4
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 1.6e-33 149.1 262 35.1
QL05p050737 Quercus lobata HOM05D005395 ORTHO05D006352 3.8e-30 137.9 279 32.6
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 3.0e-27 128.3 247 33.2
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 1.1e-26 126.3 294 29.9
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 2.1e-25 122.1 237 32.1
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 2.8e-25 121.7 281 29.2
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 6.3e-25 120.6 282 30.5
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 6.3e-25 120.6 281 30.6
Cre04.g213652 Chlamydomonas reinhardtii HOM05D005395 ORTHO05D006352 1.1e-24 119.8 215 30.7
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 1.8e-24 119.0 222 32.0
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 9.0e-24 116.7 281 29.5
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 9.0e-24 116.7 281 29.5
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 2.0e-23 115.5 206 36.9
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 7.6e-23 113.6 262 29.8
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 1.7e-22 112.5 134 42.5
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 2.2e-22 112.1 102 49.0
PSO384G3069 Papaver somniferum HOM05D005395 ORTHO05D006352 9.3e-21 106.7 110 45.5
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 8.7e-19 100.1 237 29.5
MCO03G604 Micromonas commoda HOM05D005395 ORTHO05D006352 8.7e-19 100.1 294 26.2
Cfa026815 Carpinus fangiana HOM05D005395 ORTHO05D006352 3.3e-18 98.2 246 27.6
CBR_g45714 Chara braunii HOM05D005395 ORTHO05D006352 1.1e-16 93.2 357 24.1
Cpa.g.sc245.15 Carica papaya HOM05D005395 ORTHO05D006352 2.4e-16 92.0 145 36.6
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 1.1e-13 83.2 85 40.0
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 1.1e-10 73.2 65 52.3
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 4.1e-08 64.7 50 58.0
QL02p026296 Quercus lobata HOM05D005395 ORTHO05D006352 5.9e-07 60.8 70 41.4


User provided reference genes

Program Settings