Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 0.0e+00 1616.3 811 100.0
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 2.9e-250 869.0 729 61.3
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 7.8e-248 860.9 797 56.5
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 7.3e-246 854.4 775 58.8
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 2.1e-245 852.8 808 56.1
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 1.2e-243 847.0 766 59.0
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 3.6e-237 825.5 780 56.0
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.3e-231 806.2 777 55.2
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 8.1e-229 797.7 775 54.8
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 2.4e-228 796.2 780 55.5
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 4.0e-228 795.4 727 56.1
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 5.2e-228 795.0 774 54.9
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 1.5e-227 793.5 726 56.9
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 7.6e-227 791.2 766 55.6
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 9.9e-227 790.8 745 56.5
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.7e-226 790.0 783 54.5
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 3.8e-226 788.9 727 56.8
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 1.4e-225 786.9 778 54.2
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 2.4e-225 786.2 728 56.3
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 3.2e-225 785.8 794 53.8
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 5.4e-225 785.0 799 54.1
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 9.3e-225 784.3 724 56.6
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 1.6e-224 783.5 727 56.5
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 2.7e-224 782.7 778 54.6
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 6.0e-224 781.6 773 53.8
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 7.8e-224 781.2 775 54.5
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.3e-223 780.4 775 54.3
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 2.3e-223 779.6 726 55.8
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.9e-223 778.9 775 54.3
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 3.9e-223 778.9 745 54.6
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 1.1e-222 777.3 725 56.1
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 1.1e-222 777.3 779 53.8
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 1.5e-222 776.9 727 56.5
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 1.5e-222 776.9 781 54.2
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.5e-222 776.9 727 56.0
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 1.5e-222 776.9 735 55.5
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.5e-222 776.2 789 53.6
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 7.3e-222 774.6 801 52.8
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 7.3e-222 774.6 728 55.5
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 9.6e-222 774.2 726 55.0
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 1.6e-221 773.5 725 56.0
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 1.6e-221 773.5 774 53.5
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 8.1e-221 771.2 726 54.4
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 8.1e-221 771.2 726 54.8
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 8.1e-221 771.2 788 52.9
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 2.4e-220 769.6 760 53.8
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 2.4e-220 769.6 731 55.7
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 3.1e-220 769.2 726 54.3
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 4.0e-220 768.8 728 56.0
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 9.0e-220 767.7 743 53.8
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 2.0e-219 766.5 791 52.8
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 3.4e-219 765.8 733 54.7
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 3.4e-219 765.8 776 52.3
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 7.6e-219 764.6 728 54.3
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 9.9e-219 764.2 728 54.9
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 2.2e-218 763.1 776 52.1
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 2.9e-218 762.7 780 53.2
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 2.4e-217 759.6 726 54.7
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 1.2e-216 757.3 797 51.3
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 2.1e-216 756.5 800 52.8
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 2.7e-216 756.1 785 53.4
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 4.6e-216 755.4 766 53.7
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 4.6e-216 755.4 732 54.5
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 6.0e-216 755.0 800 52.1
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 3.3e-214 749.2 728 53.3
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 2.1e-213 746.5 734 54.2
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 3.7e-213 745.7 775 51.4
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 8.1e-213 744.6 777 51.0
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 8.1e-213 744.6 795 50.9
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 8.1e-213 744.6 789 50.6
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 1.8e-212 743.4 734 53.1
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 1.8e-212 743.4 726 53.2
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 4.0e-212 742.3 725 53.4
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 4.0e-212 742.3 716 54.7
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 4.0e-212 742.3 742 52.2
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 6.9e-212 741.5 777 51.2
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 1.2e-211 740.7 779 51.1
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 3.4e-211 739.2 786 50.6
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 7.6e-211 738.0 805 50.3
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 1.3e-210 737.3 783 50.6
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 1.3e-210 737.3 726 53.2
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 6.4e-210 734.9 728 52.9
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 1.9e-209 733.4 774 51.6
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 2.4e-209 733.0 771 51.0
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 2.4e-209 733.0 802 50.2
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 2.1e-208 729.9 773 51.1
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 3.9e-207 725.7 774 49.6
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 8.7e-207 724.5 801 49.8
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 4.3e-206 722.2 735 52.4
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 1.5e-203 713.8 735 52.1
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 2.6e-203 713.0 735 51.8
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 5.8e-203 711.8 783 50.2
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 1.3e-202 710.7 515 67.8
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 5.5e-201 705.3 730 50.7
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 1.2e-200 704.1 735 51.4
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 3.5e-200 702.6 773 49.8
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 6.7e-199 698.4 748 50.0
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 4.8e-197 692.2 772 49.6
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 2.0e-195 686.8 726 50.7
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 7.9e-192 674.9 468 68.4
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 7.2e-185 651.7 727 49.8
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 1.2e-184 651.0 732 49.7
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 9.7e-182 641.3 675 51.3
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 8.2e-181 638.3 718 49.3
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 9.4e-177 624.8 985 40.5
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 2.7e-176 623.2 775 46.6
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 2.6e-166 590.1 395 71.4
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 1.0e-159 568.2 464 61.2
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.6e-155 554.3 665 47.7
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 9.2e-148 528.5 726 42.3
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 9.2e-140 501.9 547 51.7
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 3.1e-119 433.7 412 54.6
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.0e-106 390.6 339 60.2
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 1.0e-98 365.5 261 67.0
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 6.2e-96 356.3 432 47.0
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.1e-89 335.5 471 42.3
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 1.1e-84 318.9 338 50.9
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.9e-81 308.1 191 74.9
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 9.0e-79 299.3 479 39.9
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 2.0e-78 298.1 219 69.4
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 6.5e-61 240.0 154 73.4
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 4.4e-33 147.5 336 32.7
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 3.9e-29 134.4 121 57.9
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.3e-26 125.2 122 50.8
SEGI_03808 Sequoiadendron giganteum HOM05D003235 ORTHO05D003863 1.1e-07 63.2 40 77.5
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 5.4e-07 60.8 52 59.6
SEGI_00226 Sequoiadendron giganteum HOM05D003309 ORTHO05D003810 1.6e-06 59.3 58 60.3


User provided reference genes

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