Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 9.0e-53 209.9 101 100.0
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 1.6e-25 119.4 76 67.1
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 7.9e-25 117.1 74 74.3
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 1.4e-24 116.3 76 71.1
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 2.3e-24 115.5 74 73.0
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 2.3e-24 115.5 74 71.6
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 3.0e-24 115.2 74 70.3
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 3.0e-24 115.2 74 73.0
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 3.9e-24 114.8 76 69.7
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 6.7e-24 114.0 74 67.6
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.1e-23 113.2 74 70.3
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 1.1e-23 113.2 85 63.5
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 1.5e-23 112.8 74 70.3
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 2.0e-23 112.5 74 70.3
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 2.0e-23 112.5 74 70.3
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 4.3e-23 111.3 74 70.3
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 4.3e-23 111.3 76 67.1
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 4.3e-23 111.3 74 70.3
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 5.7e-23 110.9 76 68.4
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 5.7e-23 110.9 74 70.3
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 5.7e-23 110.9 74 68.9
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 7.4e-23 110.5 74 67.6
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 7.4e-23 110.5 76 68.4
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 9.7e-23 110.2 74 68.9
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 9.7e-23 110.2 74 68.9
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 9.7e-23 110.2 74 68.9
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 9.7e-23 110.2 74 67.6
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 1.3e-22 109.8 74 67.6
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 1.3e-22 109.8 74 66.2
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 1.3e-22 109.8 74 68.9
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.3e-22 109.8 76 67.1
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 1.3e-22 109.8 76 67.1
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 1.7e-22 109.4 74 68.9
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.7e-22 109.4 74 67.6
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.7e-22 109.4 76 67.1
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 1.7e-22 109.4 76 67.1
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 1.7e-22 109.4 76 67.1
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 1.7e-22 109.4 76 64.5
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 2.2e-22 109.0 74 67.6
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 2.2e-22 109.0 74 66.2
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 2.8e-22 108.6 74 68.9
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 2.8e-22 108.6 74 68.9
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 2.8e-22 108.6 74 66.2
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 3.7e-22 108.2 74 66.2
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 3.7e-22 108.2 74 66.2
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 6.3e-22 107.5 74 64.9
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 6.3e-22 107.5 74 64.9
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 6.3e-22 107.5 75 64.0
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 8.2e-22 107.1 74 66.2
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 8.2e-22 107.1 74 66.2
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 8.2e-22 107.1 74 67.6
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 8.2e-22 107.1 74 64.9
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 1.1e-21 106.7 74 64.9
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 1.1e-21 106.7 74 67.6
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 1.1e-21 106.7 74 66.2
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 1.1e-21 106.7 74 64.9
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.8e-21 105.9 76 64.5
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 1.8e-21 105.9 74 63.5
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 1.8e-21 105.9 76 63.2
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 2.4e-21 105.5 74 63.5
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 2.4e-21 105.5 74 63.5
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 2.4e-21 105.5 74 66.2
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 2.4e-21 105.5 73 68.5
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 3.1e-21 105.1 76 65.8
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 3.1e-21 105.1 74 63.5
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 3.1e-21 105.1 74 64.9
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 3.1e-21 105.1 74 64.9
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 3.1e-21 105.1 74 64.9
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 4.1e-21 104.8 74 62.2
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 6.9e-21 104.0 74 62.2
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 6.9e-21 104.0 74 64.9
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 9.1e-21 103.6 87 56.3
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 9.1e-21 103.6 76 63.2
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 9.1e-21 103.6 74 62.2
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 1.2e-20 103.2 74 64.9
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.5e-20 102.8 74 64.9
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 2.0e-20 102.4 74 62.2
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 2.0e-20 102.4 74 62.2
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 2.0e-20 102.4 74 63.5
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 2.6e-20 102.1 74 63.5
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 3.4e-20 101.7 76 61.8
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 4.5e-20 101.3 74 63.5
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 7.7e-20 100.5 76 63.2
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 1.3e-19 99.8 74 60.8
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 1.3e-19 99.8 74 60.8
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 1.3e-19 99.8 74 60.8
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 1.3e-19 99.8 74 60.8
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 1.7e-19 99.4 74 60.8
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 1.7e-19 99.4 73 61.6
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.7e-19 99.4 74 62.2
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 5.0e-19 97.8 74 59.5
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 5.0e-19 97.8 76 59.2
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 2.5e-18 95.5 94 51.1
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.6e-15 85.5 77 58.4
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 1.3e-14 83.2 74 54.1
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 1.3e-14 83.2 98 46.9
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.2e-14 82.4 77 55.8
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.2e-14 82.4 77 55.8
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 6.3e-14 80.9 54 64.8
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 1.8e-13 79.3 76 52.6
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 3.1e-13 78.6 69 55.1
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 3.1e-13 78.6 69 55.1
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 5.9e-12 74.3 73 49.3
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 1.3e-11 73.2 74 50.0
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 2.9e-11 72.0 74 48.6


User provided reference genes

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