Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09068 Sequoiadendron giganteum HOM05D005831 ORTHO05D007007 1.4e-44 182.6 92 100.0
TPR.G10653 Trifolium pratense HOM05D005831 ORTHO05D007007 2.5e-17 92.0 83 57.8
Migut.A00086 Erythranthe guttata HOM05D005831 ORTHO05D007007 4.2e-17 91.3 77 57.1
Cpa.g.sc126.34 Carica papaya HOM05D005831 ORTHO05D007007 1.6e-16 89.4 62 67.7
MSTRG.25981 Avicennia marina HOM05D005831 ORTHO05D007007 2.1e-16 89.0 77 55.8
VMungo0647G0599 Vigna mungo HOM05D005831 ORTHO05D007007 2.8e-16 88.6 61 68.9
Medtr1g015390 Medicago truncatula HOM05D005831 ORTHO05D007007 4.7e-16 87.8 59 69.5
Phvul.001G039000 Phaseolus vulgaris HOM05D005831 ORTHO05D007007 4.7e-16 87.8 78 60.3
Cfa018014 Carpinus fangiana HOM05D005831 ORTHO05D007007 6.1e-16 87.4 61 65.6
Glyma.14G099100 Glycine max HOM05D005831 ORTHO05D007007 6.1e-16 87.4 59 69.5
Cc08_g01270 Coffea canephora HOM05D005831 ORTHO05D007007 8.0e-16 87.0 82 52.4
Lj5g0001901 Lotus japonicus HOM05D005831 ORTHO05D007007 8.0e-16 87.0 69 59.4
CAN.G6.15 Capsicum annuum HOM05D005831 ORTHO05D007007 1.0e-15 86.7 66 62.1
FAN27G2028 Fragaria x ananassa HOM05D005831 ORTHO05D007007 1.0e-15 86.7 73 57.5
Nitab4.5_0000446g0240 Nicotiana tabacum HOM05D005831 ORTHO05D007007 1.0e-15 86.7 70 60.0
Nitab4.5_0009773g0010 Nicotiana tabacum HOM05D005831 ORTHO05D007007 1.0e-15 86.7 60 66.7
Thecc.09G062000 Theobroma cacao HOM05D005831 ORTHO05D007007 1.0e-15 86.7 66 62.1
CANSAT25G0005 Cannabis sativa HOM05D005831 ORTHO05D007007 1.4e-15 86.3 70 58.6
COL.COLO4_21126 Corchorus olitorius HOM05D005831 ORTHO05D007007 1.4e-15 86.3 59 67.8
Duzib150G1275 Durio zibethinus HOM05D005831 ORTHO05D007007 1.4e-15 86.3 59 66.1
FvH4_2g31140 Fragaria vesca HOM05D005831 ORTHO05D007007 1.4e-15 86.3 59 66.1
FAN24G1737 Fragaria x ananassa HOM05D005831 ORTHO05D007007 1.4e-15 86.3 59 66.1
Gohir.D07G020000 Gossypium hirsutum HOM05D005831 ORTHO05D007007 1.4e-15 86.3 59 67.8
Gorai.001G020700 Gossypium raimondii HOM05D005831 ORTHO05D007007 1.4e-15 86.3 59 67.8
PSO210G0521 Papaver somniferum HOM05D005831 ORTHO05D007007 1.4e-15 86.3 89 50.6
PSO210G7793 Papaver somniferum HOM05D005831 ORTHO05D007007 1.4e-15 86.3 63 63.5
RcHm_v2.0_Chr6g0311631 Rosa chinensis HOM05D005831 ORTHO05D007007 1.4e-15 86.3 59 66.1
arahy.Tifrunner.gnm1.ann1.2ULK6I Arachis hypogaea HOM05D005831 ORTHO05D007007 1.8e-15 85.9 70 62.9
Glyma.17G225600 Glycine max HOM05D005831 ORTHO05D007007 1.8e-15 85.9 59 67.8
Lsat_1_v5_gn_5_79500 Lactuca sativa HOM05D005831 ORTHO05D007007 1.8e-15 85.9 61 63.9
CiPaw.15G092600 Carya illinoinensis HOM05D005831 ORTHO05D007007 2.3e-15 85.5 83 51.8
Haze_18115 Corylus avellana HOM05D005831 ORTHO05D007007 2.3e-15 85.5 61 63.9
Hma1.2p1_0231F.1_g097400 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 2.3e-15 85.5 59 67.8
PGR004G2090 Punica granatum HOM05D005831 ORTHO05D007007 2.3e-15 85.5 62 64.5
Actinidia25695 Actinidia chinensis HOM05D005831 ORTHO05D007007 3.0e-15 85.1 60 65.0
Ca_13107_v3 Cicer arietinum L. HOM05D005831 ORTHO05D007007 3.0e-15 85.1 69 65.2
MELO3C016909.2 Cucumis melo HOM05D005831 ORTHO05D007007 3.0e-15 85.1 88 51.1
CsaV3_4G036010 Cucumis sativus L. HOM05D005831 ORTHO05D007007 3.0e-15 85.1 88 51.1
MBI19_g11845_MAGBIO Magnolia biondii HOM05D005831 ORTHO05D007007 3.0e-15 85.1 59 66.1
BcaB08g35248 Brassica carinata HOM05D005831 ORTHO05D007007 4.0e-15 84.7 77 51.9
ClCG05G015690 Citrullus lanatus HOM05D005831 ORTHO05D007007 4.0e-15 84.7 88 51.1
Rhsim03G0040100 Rhododendron simsii HOM05D005831 ORTHO05D007007 4.0e-15 84.7 59 66.1
Solyc04g080930.4 Solanum lycopersicum HOM05D005831 ORTHO05D007007 4.0e-15 84.7 60 65.0
Sopen04g034540 Solanum pennellii HOM05D005831 ORTHO05D007007 4.0e-15 84.7 60 65.0
PGSC0003DMG400003758 Solanum tuberosum HOM05D005831 ORTHO05D007007 4.0e-15 84.7 60 65.0
Lalb_Chr09g0334801 Lupinus albus HOM05D005831 ORTHO05D007007 5.2e-15 84.3 70 61.4
Manes.03G052700 Manihot esculenta HOM05D005831 ORTHO05D007007 5.2e-15 84.3 60 65.0
QL04p096581 Quercus lobata HOM05D005831 ORTHO05D007007 5.2e-15 84.3 59 66.1
SalBow4G2055 Salvia bowleyana HOM05D005831 ORTHO05D001900 6.8e-15 84.0 78 55.1
Sp4g07000 Schrenkiella parvula HOM05D005831 ORTHO05D007007 6.8e-15 84.0 60 63.3
SGA_v2.0_scaffold64G21865 Striga asiatica HOM05D005831 ORTHO05D007007 6.8e-15 84.0 88 50.0
Atru.chr7.1858 Acer truncatum HOM05D005831 ORTHO05D007007 8.8e-15 83.6 59 64.4
Thhalv10002014m.g Eutrema salsugineum HOM05D005831 ORTHO05D007007 8.8e-15 83.6 60 63.3
Oeu027284.3 Olea europaea HOM05D005831 ORTHO05D007007 8.8e-15 83.6 58 67.2
Potri.006G222000 Populus trichocarpa HOM05D005831 ORTHO05D007007 8.8e-15 83.6 59 64.4
FAN15G1366 Fragaria x ananassa HOM05D005831 ORTHO05D007007 1.2e-14 83.2 58 65.5
GSVIVG01035453001 Vitis vinifera HOM05D005831 ORTHO05D007007 1.2e-14 83.2 59 64.4
ATR0598G074 Amborella trichopoda HOM05D005831 ORTHO05D007007 1.5e-14 82.8 81 51.9
BcaC07g40824 Brassica carinata HOM05D005831 ORTHO05D007007 1.5e-14 82.8 60 61.7
A09p54720 Brassica napus HOM05D005831 ORTHO05D007007 1.5e-14 82.8 60 61.7
A09p55230 Brassica napus HOM05D005831 ORTHO05D007007 1.5e-14 82.8 60 61.7
C08p38160 Brassica napus HOM05D005831 ORTHO05D007007 1.5e-14 82.8 60 61.7
BolC8t51391H Brassica oleracea HOM05D005831 ORTHO05D007007 1.5e-14 82.8 60 61.7
BraA09t40881Z Brassica rapa HOM05D005831 ORTHO05D007007 1.5e-14 82.8 60 61.7
BraA09t40930Z Brassica rapa HOM05D005831 ORTHO05D007007 1.5e-14 82.8 60 61.7
Carub.0004s0626 Capsella rubella HOM05D005831 ORTHO05D007007 1.5e-14 82.8 60 61.7
Nn8g38706 Nelumbo nucifera HOM05D005831 ORTHO05D007007 1.5e-14 82.8 84 50.0
Sabra06G0171700 Salix brachista HOM05D005831 ORTHO05D007007 1.5e-14 82.8 59 62.7
THA.LOC104806019 Tarenaya hassleriana HOM05D005831 ORTHO05D007007 1.5e-14 82.8 73 56.2
unitig_748.g8240 Utricularia gibba HOM05D005831 ORTHO05D007007 1.5e-14 82.8 76 52.6
CSS0021293 Camellia sinensis var. sinensis HOM05D005831 ORTHO05D007007 2.0e-14 82.4 83 50.6
MD15G1051800 Malus domestica HOM05D005831 ORTHO05D007007 2.0e-14 82.4 61 63.9
TWI38G0260 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 2.0e-14 82.4 51 74.5
Eucgr.C03149 Eucalyptus grandis HOM05D005831 ORTHO05D007007 2.6e-14 82.0 59 62.7
HanXRQChr12g0359011 Helianthus annuus HOM05D005831 ORTHO05D007007 2.6e-14 82.0 61 60.7
vmacro07801 Vaccinium macrocarpon HOM05D005831 ORTHO05D007007 2.6e-14 82.0 60 60.0
AL4G18970 Arabidopsis lyrata HOM05D005831 ORTHO05D007007 4.4e-14 81.3 60 60.0
AT2G26350 Arabidopsis thaliana HOM05D005831 ORTHO05D007007 4.4e-14 81.3 60 60.0
CDE06G1722 Ceratophyllum demersum HOM05D005831 ORTHO05D007007 4.4e-14 81.3 59 61.0
Os07g0608800 Oryza sativa ssp. japonica HOM05D005831 ORTHO05D007007 4.4e-14 81.3 77 51.9
Sed0012871 Sechium edule HOM05D005831 ORTHO05D007007 4.4e-14 81.3 88 48.9
Aa31LG5G18500 Aethionema arabicum HOM05D005831 ORTHO05D007007 7.5e-14 80.5 60 60.0
Mapoly0029s0064 Marchantia polymorpha HOM05D005831 ORTHO05D007007 7.5e-14 80.5 85 49.4
TWI15G0825 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 7.5e-14 80.5 58 63.8
Aqoxy2G00096 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 9.8e-14 80.1 59 64.4
Ciclev10025877m.g Citrus clementina HOM05D005831 ORTHO05D007007 9.8e-14 80.1 59 61.0
ECA234G1597 Erigeron canadensis HOM05D005831 ORTHO05D007007 9.8e-14 80.1 59 59.3
Aqoxy3G01546 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 1.3e-13 79.7 59 62.7
Prupe.1G405700 Prunus persica HOM05D005831 ORTHO05D007007 1.3e-13 79.7 59 64.4
DCAR_003715 Daucus carota HOM05D005831 ORTHO05D007007 2.2e-13 79.0 60 61.7
MD08G1070400 Malus domestica HOM05D005831 ORTHO05D007007 2.2e-13 79.0 58 63.8
TAR383G0824 Trochodendron aralioides HOM05D005831 ORTHO05D007007 6.3e-13 77.4 48 72.9
Aqoxy3G01853 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 2.4e-12 75.5 60 63.3
AUR62009089 Chenopodium quinoa HOM05D005831 ORTHO05D007007 4.1e-12 74.7 57 59.6
AUR62020581 Chenopodium quinoa HOM05D005831 ORTHO05D007007 4.1e-12 74.7 60 56.7
Lj2A627G34 Lonicera japonica HOM05D005831 ORTHO05D007007 9.2e-12 73.6 74 52.7
Sc09g0010090 Simmondsia chinensis HOM05D005831 ORTHO05D007007 1.2e-11 73.2 58 60.3
EL10Ac2g03793 Beta vulgaris HOM05D005831 ORTHO05D007007 1.6e-11 72.8 60 55.0
arahy.Tifrunner.gnm1.ann1.12X2WP Arachis hypogaea HOM05D005831 ORTHO05D007007 2.7e-11 72.0 53 64.2
FAN20G1335 Fragaria x ananassa HOM05D001583 ORTHO05D007007 2.7e-11 72.0 107 41.1
Peaxi162Scf00101g01522 Petunia axillaris HOM05D005831 ORTHO05D007007 1.9e-09 65.9 48 66.7
Pp3c13_19650 Physcomitrium patens HOM05D005831 ORTHO05D007007 2.5e-09 65.5 57 54.4
arahy.Tifrunner.gnm1.ann1.FV9EQX Arachis hypogaea HOM05D005831 ORTHO05D007007 4.3e-09 64.7 58 58.6
Solyc08g061880.2 Solanum lycopersicum HOM05D005831 ORTHO05D007007 9.5e-09 63.5 57 61.4
CBR_g34477 Chara braunii HOM05D005831 ORTHO05D007007 2.0e-06 55.8 55 49.1


User provided reference genes

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