Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 7.3e-209 730.3 372 100.0
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 2.7e-131 472.6 346 65.6
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 5.9e-126 454.9 345 63.2
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 5.9e-126 454.9 347 62.8
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.3e-125 453.8 345 62.9
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 6.5e-125 451.4 346 65.9
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 6.5e-125 451.4 347 62.8
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 2.5e-124 449.5 372 59.4
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 3.2e-124 449.1 351 61.3
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 4.2e-124 448.7 351 61.0
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 1.8e-122 443.4 347 60.8
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 3.0e-122 442.6 363 60.1
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 8.8e-122 441.0 343 60.3
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 8.8e-122 441.0 343 60.3
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 1.2e-121 440.7 347 61.7
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 1.5e-121 440.3 351 61.3
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.5e-121 440.3 343 60.6
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 5.7e-121 438.3 347 61.4
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 2.8e-120 436.0 347 61.1
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 2.8e-120 436.0 357 59.9
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 6.3e-120 434.9 346 61.8
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 6.3e-120 434.9 348 60.3
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 1.4e-119 433.7 347 60.2
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 1.4e-119 433.7 347 61.4
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 3.1e-119 432.6 345 60.0
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 4.1e-119 432.2 345 59.7
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 5.4e-119 431.8 347 62.8
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.6e-118 430.3 347 58.8
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 1.6e-118 430.3 310 66.8
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 1.0e-117 427.6 323 63.2
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 1.3e-117 427.2 343 58.6
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 2.2e-117 426.4 343 58.9
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 2.2e-117 426.4 346 60.4
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 2.9e-117 426.0 351 58.4
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 5.0e-117 425.2 318 63.8
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 5.0e-117 425.2 347 57.3
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 1.1e-116 424.1 325 61.2
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 1.5e-116 423.7 318 63.5
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 2.5e-116 422.9 343 58.6
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 4.2e-116 422.2 342 59.4
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 5.5e-116 421.8 325 60.3
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 5.5e-116 421.8 313 63.9
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 7.2e-116 421.4 325 60.6
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 7.2e-116 421.4 343 58.6
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 2.1e-115 419.9 340 60.0
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 2.8e-115 419.5 343 59.2
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 3.6e-115 419.1 326 59.8
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 3.6e-115 419.1 326 59.8
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 6.1e-115 418.3 361 57.1
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 1.4e-114 417.2 344 56.4
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 2.3e-114 416.4 326 59.8
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 2.3e-114 416.4 372 56.2
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 2.3e-114 416.4 325 59.7
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 5.2e-114 415.2 372 55.9
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 8.8e-114 414.5 326 59.2
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 1.2e-113 414.1 325 59.7
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 2.0e-113 413.3 326 58.9
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 2.0e-113 413.3 353 57.8
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 7.5e-113 411.4 324 58.6
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 7.5e-113 411.4 360 56.9
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 1.7e-112 410.2 392 52.6
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 1.7e-112 410.2 357 56.9
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 2.2e-112 409.8 326 59.8
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 4.1e-111 405.6 339 57.2
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 9.2e-111 404.4 342 59.1
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 2.0e-110 403.3 340 58.5
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 9.5e-108 394.4 400 51.0
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 1.6e-107 393.7 340 57.6
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 8.0e-107 391.3 313 61.3
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 3.4e-105 386.0 329 57.4
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 7.0e-103 378.3 346 54.6
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 4.6e-102 375.6 351 53.8
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 6.6e-101 371.7 325 55.4
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 2.2e-96 356.7 347 52.7
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 5.0e-93 345.5 318 55.0
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 6.6e-93 345.1 320 51.6
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 2.5e-92 343.2 306 55.6
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 2.5e-92 343.2 309 56.6
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 2.5e-92 343.2 373 48.0
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 3.3e-92 342.8 303 57.1
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 2.2e-88 330.1 252 65.1
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 2.5e-84 316.6 400 44.2
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 3.1e-82 309.7 403 42.7
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.9e-79 300.4 358 45.0
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 4.1e-79 299.3 262 58.0
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 2.7e-78 296.6 345 47.8
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 3.5e-78 296.2 369 44.4
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.6e-75 286.2 367 43.6
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 3.8e-72 276.2 289 51.9
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 7.1e-71 271.9 306 47.1
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 2.1e-70 270.4 248 56.0
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 4.0e-66 256.1 290 47.6
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 3.9e-61 239.6 180 62.2
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 1.9e-60 237.3 151 68.2
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 4.0e-58 229.6 153 67.3
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.4e-55 221.1 171 59.1
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 1.2e-54 218.0 180 59.4
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 6.7e-53 212.2 175 61.7
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 8.7e-53 211.8 180 60.6
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 3.3e-52 209.9 175 60.0
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.3e-51 208.0 175 58.3
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 1.5e-49 201.1 166 58.4
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 5.5e-47 192.6 224 43.3
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 7.9e-46 188.7 172 55.8
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 4.3e-44 183.0 126 65.9
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 7.4e-44 182.2 122 63.9
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 1.9e-39 167.5 108 69.4
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 9.3e-39 165.2 346 32.7
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 1.3e-35 154.8 214 44.9
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 2.8e-35 153.7 129 55.0
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 1.8e-34 151.0 93 78.5
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 4.1e-34 149.8 101 71.3
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 1.1e-31 141.7 91 64.8
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 1.6e-30 137.9 91 59.3
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 2.1e-30 137.5 123 53.7
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 2.6e-28 130.6 91 61.5
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 2.8e-27 127.1 120 50.0
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 1.2e-25 121.7 221 35.3
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 2.6e-25 120.6 113 54.0
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 7.2e-23 112.5 121 44.6
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 3.6e-22 110.2 74 64.9
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 6.1e-22 109.4 101 51.5
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 8.0e-22 109.0 96 52.1
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 7.4e-20 102.4 82 61.0
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 1.7e-19 101.3 63 73.0
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 5.3e-18 96.3 72 66.7
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.6e-17 94.7 79 58.2
Carub.0003s2623 Capsella rubella HOM05D006555 ORTHO05D008376 7.2e-15 85.9 282 25.9
Thhalv10027647m.g Eutrema salsugineum HOM05D006555 ORTHO05D008376 7.2e-15 85.9 369 23.6
AT2G04620 Arabidopsis thaliana HOM05D006555 ORTHO05D008376 1.2e-14 85.1 254 26.0
BcaB06g27415 Brassica carinata HOM05D006555 ORTHO05D008376 2.7e-14 84.0 356 24.4
CARHR102570 Cardamine hirsuta HOM05D006555 ORTHO05D008376 1.0e-13 82.0 276 25.0
Sp7g02000 Schrenkiella parvula HOM05D006555 ORTHO05D008376 5.2e-13 79.7 258 26.7
C04p46570 Brassica napus HOM05D006555 ORTHO05D008376 1.2e-12 78.6 331 24.8
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 2.6e-12 77.4 101 42.6
Lalb_Chr04g0258611 Lupinus albus HOM05D006555 ORTHO05D008376 3.3e-12 77.0 236 27.1
BolC4t26243H Brassica oleracea HOM05D006555 ORTHO05D008376 4.4e-12 76.6 331 24.8
CiPaw.03G033500 Carya illinoinensis HOM05D006555 ORTHO05D008376 1.7e-11 74.7 257 25.7
BraA04t16950Z Brassica rapa HOM05D006555 ORTHO05D008376 2.8e-11 73.9 238 26.9
A04p12870 Brassica napus HOM05D006555 ORTHO05D008376 3.7e-11 73.6 238 26.9
TWI56G0535 Tripterygium wilfordii HOM05D006555 ORTHO05D008376 4.8e-11 73.2 236 25.0
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 6.3e-11 72.8 269 26.8
MBI14_g15702_MAGBIO Magnolia biondii HOM05D006555 ORTHO05D008376 6.3e-11 72.8 314 23.9
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 2.4e-10 70.9 348 23.9
AL3G42250 Arabidopsis lyrata HOM05D006555 ORTHO05D008376 2.0e-09 67.8 253 24.9
Haze_14619 Corylus avellana HOM05D006555 ORTHO05D008376 2.0e-09 67.8 254 24.0
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 2.7e-09 67.4 318 24.5
PSO013G0385 Papaver somniferum HOM05D006555 ORTHO05D008376 2.7e-09 67.4 248 25.0
THA.LOC104800651 Tarenaya hassleriana HOM05D006555 ORTHO05D008376 5.9e-09 66.2 244 23.8
PSO832G4179 Papaver somniferum HOM05D006555 ORTHO05D008376 7.7e-09 65.9 247 24.3
EL10Ac3g05120 Beta vulgaris HOM05D006555 ORTHO05D008376 1.0e-08 65.5 346 23.1
Sc20g0004830 Simmondsia chinensis HOM05D006555 ORTHO05D008376 1.0e-08 65.5 286 23.1
Potri.005G110300 Populus trichocarpa HOM05D006555 ORTHO05D008376 1.7e-08 64.7 252 24.2
Psat1g109920 Pisum sativum HOM05D006555 ORTHO05D008376 2.2e-08 64.3 319 22.6
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 2.2e-08 64.3 132 27.3
Sabra05G0090500 Salix brachista HOM05D006555 ORTHO05D008376 2.9e-08 63.9 242 23.6
Manes.17G119457 Manihot esculenta HOM05D006555 ORTHO05D008376 5.0e-08 63.2 242 24.0
Thecc.04G067100 Theobroma cacao HOM05D006555 ORTHO05D008376 7.2e-07 59.3 314 22.6
VMungo0251G3141 Vigna mungo HOM05D006555 ORTHO05D008376 7.2e-07 59.3 272 24.3
Phvul.002G176300 Phaseolus vulgaris HOM05D006555 ORTHO05D008376 9.4e-07 58.9 267 24.3
Glyma.08G102000 Glycine max HOM05D006555 ORTHO05D008376 1.2e-06 58.5 253 24.5
ECA246G4860 Erigeron canadensis HOM05D006555 ORTHO05D008376 2.1e-06 57.8 222 24.3
Cfa007479 Carpinus fangiana HOM05D006555 ORTHO05D008376 3.6e-06 57.0 188 22.9
Gohir.D07G224400 Gossypium hirsutum HOM05D006555 ORTHO05D008376 8.0e-06 55.8 192 26.0
Gorai.001G258800 Gossypium raimondii HOM05D006555 ORTHO05D008376 8.0e-06 55.8 192 26.0


User provided reference genes

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