Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08978 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1451.4 721 100.0
SEGI_30045 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1373.6 736 93.6
SEGI_39398 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1370.5 736 93.6
SEGI_00654 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1361.7 736 93.2
SEGI_01619 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1357.4 736 92.5
SEGI_39080 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1186.8 647 92.3
SEGI_09628 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1146.3 721 81.8
SEGI_30043 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1146.3 721 81.8
SEGI_25194 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1116.3 601 93.2
SEGI_11424 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.0e-307 1058.1 733 72.2
SEGI_01018 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.9e-286 988.4 647 76.4
SEGI_28448 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.0e-280 968.0 721 72.3
SEGI_34953 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.9e-268 927.2 632 73.7
SEGI_14024 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.2e-257 891.0 504 90.1
SEGI_13303 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.3e-250 868.2 612 70.4
SEGI_24051 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.6e-197 691.8 485 70.9
SEGI_05518 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.3e-189 664.8 463 74.9
SEGI_11933 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 2.4e-171 606.7 435 67.8
SEGI_12977 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.5e-143 513.1 680 48.1
SEGI_19415 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.4e-141 505.4 420 62.6
SEGI_04345 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.2e-136 490.0 338 68.9
SEGI_21011 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.9e-135 485.3 332 75.9
SEGI_01179 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.5e-130 471.1 336 72.3
SEGI_39857 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.7e-130 468.8 340 72.6
SEGI_02873 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.9e-129 466.8 295 80.0
SEGI_24191 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.6e-117 427.2 292 75.3
SEGI_00994 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.4e-115 421.4 277 71.8
SEGI_00547 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.3e-100 369.4 241 74.3
SEGI_22032 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.2e-82 312.0 425 46.8
SEGI_10716 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.6e-77 294.3 183 76.0
SEGI_27237 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.2e-69 268.9 217 60.8
SEGI_17597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.8e-62 243.0 264 49.2
SEGI_25095 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.6e-61 239.6 392 38.3
PSO017G5635 Papaver somniferum HOM05D007914 ORTHO05D006902 3.8e-60 237.3 647 30.1
SEGI_29989 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.3e-51 206.1 264 42.8
SEGI_17357 Sequoiadendron giganteum HOM05D000824 ORTHO05D006902 9.6e-48 196.1 304 41.1
PSO384G4122 Papaver somniferum HOM05D007914 ORTHO05D006902 5.8e-45 186.8 516 30.6
SEGI_27597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.6e-42 178.7 198 49.0
SEGI_29479 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.3e-41 175.6 266 41.4
SEGI_40659 Sequoiadendron giganteum HOM05D000044 ORTHO05D006634 4.3e-40 170.6 176 51.1
SEGI_27643 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.8e-38 165.2 291 33.7
SEGI_19677 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.4e-37 161.0 146 58.9
SEGI_15588 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.1e-35 153.3 151 51.7
SEGI_07585 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.3e-33 148.3 202 42.6
SEGI_17638 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.3e-33 148.3 152 51.3
SEGI_00079 Sequoiadendron giganteum HOM05D000773 ORTHO05D000588 1.1e-32 146.0 206 40.8
SEGI_11766 Sequoiadendron giganteum HOM05D007936 ORTHO05D009941 3.3e-32 144.4 205 38.0
SEGI_24050 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.4e-30 138.3 130 57.7
PSO541G2104 Papaver somniferum HOM05D007914 ORTHO05D023061 4.5e-29 134.0 475 27.2
SEGI_28544 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.9e-27 128.6 163 42.9
Cre09.g417400 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 2.8e-23 114.8 467 25.3
SEGI_11812 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.2e-23 113.2 71 80.3
Cre02.g142987 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.4e-22 112.5 488 26.0
Cre32.g758797 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.4e-22 112.5 491 25.5
Cre45.g760847 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.4e-22 112.5 488 26.0
SEGI_12989 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.3e-22 110.5 109 50.5
Lalb_Chr20g0114131 Lupinus albus HOM05D008038 ORTHO05D006902 6.9e-22 110.2 423 28.1
Duzib264G0258 Durio zibethinus HOM05D008038 ORTHO05D006902 1.2e-21 109.4 425 27.1
SEGI_20543 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.5e-21 107.5 121 47.9
PSO675G0998 Papaver somniferum HOM05D007914 ORTHO05D023061 7.6e-21 106.7 360 26.4
Hund18510 Selenicereus undatus HOM05D008038 ORTHO05D006902 1.3e-20 105.9 413 26.4
Lj6g0005294 Lotus japonicus HOM05D008038 ORTHO05D006902 2.9e-20 104.8 420 25.0
SEGI_08534 Sequoiadendron giganteum HOM05D000026 ORTHO05D000094 6.5e-20 103.6 201 34.8
SEGI_34863 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.5e-20 103.2 190 39.5
Thecc.01G159700 Theobroma cacao HOM05D008038 ORTHO05D006902 8.5e-20 103.2 429 26.6
unitig_899.g15335 Utricularia gibba HOM05D008038 ORTHO05D006902 8.5e-20 103.2 429 26.6
Prupe.3G170200 Prunus persica HOM05D008038 ORTHO05D006902 5.5e-19 100.5 405 26.2
Glyma.08G310900 Glycine max HOM05D008038 ORTHO05D006902 2.7e-18 98.2 438 26.5
PGR142G1605 Punica granatum HOM05D008038 ORTHO05D006902 4.6e-18 97.4 404 27.5
TAR375G0666 Trochodendron aralioides HOM05D008038 ORTHO05D006902 4.6e-18 97.4 407 26.0
Ah.15g095480 Amaranthus hybridus HOM05D008038 ORTHO05D006902 6.1e-18 97.1 394 28.4
SGA_v2.0_scaffold46G17483 Striga asiatica HOM05D008038 ORTHO05D006902 6.1e-18 97.1 407 27.3
PSO675G5731 Papaver somniferum HOM05D008038 ORTHO05D006902 1.3e-17 95.9 432 26.9
Dinv12711 Davidia involucrata HOM05D008038 ORTHO05D006902 1.8e-17 95.5 441 25.2
Potri.007G054500 Populus trichocarpa HOM05D008038 ORTHO05D006902 1.8e-17 95.5 420 25.7
CAN.G1481.7 Capsicum annuum HOM05D008038 ORTHO05D006902 3.0e-17 94.7 432 26.2
Manes.02G085900 Manihot esculenta HOM05D008038 ORTHO05D006902 3.0e-17 94.7 407 27.8
QL08p043670 Quercus lobata HOM05D008038 ORTHO05D006902 3.0e-17 94.7 405 27.2
Sopen07g029260 Solanum pennellii HOM05D008038 ORTHO05D006902 3.0e-17 94.7 475 25.3
arahy.Tifrunner.gnm1.ann1.6HAR6G Arachis hypogaea HOM05D008038 ORTHO05D006902 3.9e-17 94.4 420 26.9
PSO541G6518 Papaver somniferum HOM05D008038 ORTHO05D006902 6.7e-17 93.6 432 27.1
FvH4_6g37811 Fragaria vesca HOM05D008038 ORTHO05D006902 1.1e-16 92.8 420 26.2
PGSC0003DMG400017364 Solanum tuberosum HOM05D008038 ORTHO05D006902 1.1e-16 92.8 483 24.6
EL10Ac7g18043 Beta vulgaris HOM05D008038 ORTHO05D006902 2.5e-16 91.7 401 26.7
CiPaw.04G110800 Carya illinoinensis HOM05D008038 ORTHO05D006902 3.3e-16 91.3 405 26.7
Solyc07g055900.1 Solanum lycopersicum HOM05D008038 ORTHO05D006902 4.3e-16 90.9 442 25.8
Actinidia11192 Actinidia chinensis HOM05D008038 ORTHO05D006902 5.7e-16 90.5 405 25.9
COL.COLO4_33719 Corchorus olitorius HOM05D008038 ORTHO05D006902 5.7e-16 90.5 400 26.8
AagrBONN_evm.TU.Sc2ySwM_368.536 Anthoceros agrestis HOM05D008038 ORTHO05D006902 7.4e-16 90.1 426 26.8
SEGI_11065 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.4e-16 90.1 146 38.4
Cc05_g09210 Coffea canephora HOM05D008038 ORTHO05D006902 9.7e-16 89.7 419 27.2
Nitab4.5_0002737g0020 Nicotiana tabacum HOM05D008038 ORTHO05D006902 9.7e-16 89.7 443 25.1
SEGI_08593 Sequoiadendron giganteum HOM05D000074 ORTHO05D001793 1.7e-15 89.0 134 38.8
PRCOL_00003757 Prasinoderma coloniale HOM05D008038 ORTHO05D006902 2.2e-15 88.6 408 24.0
MSTRG.6764 Avicennia marina HOM05D008038 ORTHO05D006902 4.8e-15 87.4 416 26.2
Dinv12709 Davidia involucrata HOM05D008038 ORTHO05D006902 4.8e-15 87.4 400 25.5
AUR62034636 Chenopodium quinoa HOM05D008038 ORTHO05D006902 8.2e-15 86.7 409 25.4
SEGI_04810 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 1.4e-14 85.9 469 24.3
Rhsim06G0121400 Rhododendron simsii HOM05D008038 ORTHO05D006902 4.1e-14 84.3 441 25.6
SEGI_11932 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.3e-14 84.0 93 41.9
SEGI_23601 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 6.9e-14 83.6 595 22.5
Mapoly0078s0037 Marchantia polymorpha HOM05D008038 ORTHO05D006902 9.1e-14 83.2 415 24.8
AUR62036633 Chenopodium quinoa HOM05D008038 ORTHO05D006902 1.5e-13 82.4 386 26.2
SEGI_33240 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 1.5e-13 82.4 411 25.8
Lj6g0001787 Lotus japonicus HOM05D008038 ORTHO05D006902 3.4e-13 81.3 253 32.4
COL.COLO4_07289 Corchorus olitorius HOM05D008038 ORTHO05D006902 4.5e-13 80.9 426 25.8
arahy.Tifrunner.gnm1.ann1.I6EGUB Arachis hypogaea HOM05D008038 ORTHO05D006902 5.9e-13 80.5 420 25.5
Nn1g09358 Nelumbo nucifera HOM05D008038 ORTHO05D006902 7.7e-13 80.1 244 28.7
Eucgr.K01193 Eucalyptus grandis HOM05D008038 ORTHO05D006902 1.0e-12 79.7 248 28.2
Aqoxy6G01155 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 1.3e-12 79.3 410 26.3
COL.COLO4_25756 Corchorus olitorius HOM05D008038 ORTHO05D006902 5.0e-12 77.4 454 25.8
SEGI_01490 Sequoiadendron giganteum HOM05D000526 ORTHO05D000956 5.0e-12 77.4 60 63.3
Aqoxy6G01154 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 6.5e-12 77.0 418 25.8
PSO339G4883 Papaver somniferum HOM05D007914 ORTHO05D006902 6.5e-12 77.0 267 27.7
SEGI_39030 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 6.5e-12 77.0 491 24.0
PSO541G1774 Papaver somniferum HOM05D007914 ORTHO05D006902 1.4e-11 75.9 88 44.3
SEGI_12776 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.5e-11 75.1 52 69.2
Nn1g09359 Nelumbo nucifera HOM05D008038 ORTHO05D006902 5.5e-11 73.9 246 30.1
Pp3c20_2590 Physcomitrium patens HOM05D008038 ORTHO05D006902 5.5e-11 73.9 413 24.5
Sc10g0010300 Simmondsia chinensis HOM05D008038 ORTHO05D006902 5.5e-11 73.9 246 29.3
CANSAT64G1128 Cannabis sativa HOM05D008038 ORTHO05D006902 1.6e-10 72.4 469 23.9
Haze_15932 Corylus avellana HOM05D008038 ORTHO05D006902 1.6e-10 72.4 368 25.8
SEGI_04271 Sequoiadendron giganteum HOM05D012154 ORTHO05D006902 2.1e-10 72.0 393 26.5
SEGI_40854 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.7e-10 70.9 152 32.2
CiPaw.01G177700 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-09 69.7 474 24.1
SEGI_23982 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 3.0e-09 68.2 75 40.0
SEGI_27914 Sequoiadendron giganteum HOM05D000018 ORTHO05D000187 5.1e-09 67.4 53 62.3
CANSAT64G2812 Cannabis sativa HOM05D008038 ORTHO05D006902 8.8e-09 66.6 465 22.8
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.7e-08 63.9 490 23.3
SEGI_21133 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 9.7e-08 63.2 300 26.3
SEGI_31205 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 2.8e-07 61.6 297 26.3
Oeu026475.1 Olea europaea HOM05D008038 ORTHO05D006902 4.8e-07 60.8 188 28.7
PRCOL_00002007 Prasinoderma coloniale HOM05D008038 ORTHO05D006902 6.3e-07 60.5 462 21.4
TWI56G0481 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 8.2e-07 60.1 484 23.1
ECA236G1250 Erigeron canadensis HOM05D000096 ORTHO05D001319 1.4e-06 59.3 498 23.5
EL10Ac1g01110 Beta vulgaris HOM05D000096 ORTHO05D000045 2.4e-06 58.5 458 23.4
SEGI_00045 Sequoiadendron giganteum HOM05D012154 ORTHO05D009660 2.4e-06 58.5 110 34.5
SEGI_22423 Sequoiadendron giganteum HOM05D010666 ORTHO05D006902 2.4e-06 58.5 108 35.2
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.1e-06 58.2 434 23.7
Cre12.g551550 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 3.1e-06 58.2 87 36.8
Cre16.g685613 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 3.1e-06 58.2 53 47.2
Mapoly0207s0005 Marchantia polymorpha HOM05D008038 ORTHO05D006902 4.1e-06 57.8 53 50.9
SEGI_08943 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 9.1e-06 56.6 82 39.0


User provided reference genes

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