Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08917 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 3.4e-83 311.6 155 100.0
SEGI_06404 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 1.7e-71 272.7 135 100.0
SGA_v2.0_scaffold45G17090 Striga asiatica HOM05D000141 ORTHO05D004489 1.6e-29 133.3 120 54.2
MSTRG.3653 Avicennia marina HOM05D000141 ORTHO05D004489 3.7e-29 132.1 114 56.1
VMungo0251G0509 Vigna mungo HOM05D000141 ORTHO05D004489 4.8e-29 131.7 130 50.8
HanXRQChr14g0443671 Helianthus annuus HOM05D000141 ORTHO05D004489 6.2e-29 131.3 123 53.7
Glyma.09G194900 Glycine max HOM05D000141 ORTHO05D004489 8.1e-29 131.0 130 50.0
Phvul.003G279200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 8.1e-29 131.0 130 50.8
Ca_22442_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 1.4e-28 130.2 133 50.4
Ca_22449_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 1.4e-28 130.2 133 50.4
Glyma.16G111200 Glycine max HOM05D000141 ORTHO05D004489 1.4e-28 130.2 130 50.0
ATR0605G264 Amborella trichopoda HOM05D000141 ORTHO05D004489 1.8e-28 129.8 115 56.5
TPR.G14268 Trifolium pratense HOM05D000141 ORTHO05D004489 1.8e-28 129.8 115 54.8
Oeu004295.1 Olea europaea HOM05D000141 ORTHO05D004489 3.1e-28 129.0 123 49.6
Oeu025038.1 Olea europaea HOM05D000141 ORTHO05D004489 4.0e-28 128.6 118 54.2
Sc03g0004200 Simmondsia chinensis HOM05D000141 ORTHO05D004489 4.0e-28 128.6 130 47.7
Gohir.A02G179100 Gossypium hirsutum HOM05D000141 ORTHO05D004489 5.3e-28 128.3 130 52.3
Cpa.g.sc17.14 Carica papaya HOM05D000141 ORTHO05D004489 6.9e-28 127.9 120 54.2
AagrBONN_evm.TU.Sc2ySwM_228.4247 Anthoceros agrestis HOM05D000141 ORTHO05D004489 1.2e-27 127.1 115 53.9
COL.COLO4_22572 Corchorus olitorius HOM05D000141 ORTHO05D004489 1.2e-27 127.1 115 55.7
Duzib147G0825 Durio zibethinus HOM05D000141 ORTHO05D004489 1.2e-27 127.1 115 55.7
Lj4C246T10 Lonicera japonica HOM05D000141 ORTHO05D004489 1.5e-27 126.7 120 52.5
RcHm_v2.0_Chr2g0096601 Rosa chinensis HOM05D000141 ORTHO05D004489 1.5e-27 126.7 130 49.2
SEGI_37552 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 1.5e-27 126.7 115 53.9
Thecc.01G000500 Theobroma cacao HOM05D000141 ORTHO05D004489 1.5e-27 126.7 115 54.8
EL10Ac6g14723 Beta vulgaris HOM05D000141 ORTHO05D004489 2.0e-27 126.3 130 46.9
Eucgr.I02176 Eucalyptus grandis HOM05D000141 ORTHO05D004489 2.0e-27 126.3 115 54.8
SGA_v2.0_scaffold229G43289 Striga asiatica HOM05D000141 ORTHO05D004489 2.0e-27 126.3 114 56.1
FAN19G2837 Fragaria x ananassa HOM05D000141 ORTHO05D004489 2.6e-27 125.9 130 50.8
Gorai.003G001000 Gossypium raimondii HOM05D000141 ORTHO05D004489 2.6e-27 125.9 130 51.5
Lj2C507G14 Lonicera japonica HOM05D000141 ORTHO05D004489 2.6e-27 125.9 130 48.5
TAR381G1317 Trochodendron aralioides HOM05D000141 ORTHO05D004489 2.6e-27 125.9 115 53.9
CANSAT25G2595 Cannabis sativa HOM05D000141 ORTHO05D004489 3.4e-27 125.6 115 53.9
Lsat_1_v5_gn_2_72800 Lactuca sativa HOM05D000141 ORTHO05D004489 3.4e-27 125.6 123 51.2
Manes.01G158800 Manihot esculenta HOM05D000141 ORTHO05D004489 3.4e-27 125.6 115 53.9
Medtr8g072430 Medicago truncatula HOM05D000141 ORTHO05D004489 3.4e-27 125.6 115 53.0
Atru.chr3.3 Acer truncatum HOM05D000141 ORTHO05D004489 4.5e-27 125.2 115 53.9
FAN28G1293 Fragaria x ananassa HOM05D000141 ORTHO05D004489 4.5e-27 125.2 130 50.0
Gohir.D03G000600 Gossypium hirsutum HOM05D000141 ORTHO05D004489 4.5e-27 125.2 130 51.5
PGR119G2404 Punica granatum HOM05D000141 ORTHO05D004489 4.5e-27 125.2 114 53.5
SalBow5G4210 Salvia bowleyana HOM05D000141 ORTHO05D004489 4.5e-27 125.2 114 53.5
CiPaw.08G183100 Carya illinoinensis HOM05D000141 ORTHO05D004489 7.6e-27 124.4 115 53.9
Dinv19108 Davidia involucrata HOM05D000141 ORTHO05D004489 7.6e-27 124.4 121 52.9
ECA238G3829 Erigeron canadensis HOM05D000141 ORTHO05D004489 7.6e-27 124.4 123 51.2
HPP92_022037 Vanilla planifolia HOM05D000141 ORTHO05D004489 7.6e-27 124.4 128 48.4
Haze_03652 Corylus avellana HOM05D000141 ORTHO05D004489 1.0e-26 124.0 115 53.9
Prupe.7G188900 Prunus persica HOM05D000141 ORTHO05D004489 1.0e-26 124.0 115 53.0
Sabra11G0131600 Salix brachista HOM05D000141 ORTHO05D004489 1.0e-26 124.0 120 52.5
CSS0021249 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 1.3e-26 123.6 130 47.7
CAN.G883.8 Capsicum annuum HOM05D000141 ORTHO05D004489 1.3e-26 123.6 130 47.7
Migut.K01161 Erythranthe guttata HOM05D000141 ORTHO05D004489 1.3e-26 123.6 130 47.7
MD15G1226100 Malus domestica HOM05D000141 ORTHO05D004489 1.3e-26 123.6 115 52.2
Pp3c9_4530 Physcomitrium patens HOM05D000141 ORTHO05D004489 1.7e-26 123.2 114 53.5
QL06p053568 Quercus lobata HOM05D000141 ORTHO05D004489 1.7e-26 123.2 120 51.7
SMO118G0228 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 1.7e-26 123.2 115 52.2
SMO222G0019 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 1.7e-26 123.2 115 52.2
AUR62016257 Chenopodium quinoa HOM05D000141 ORTHO05D004489 2.2e-26 122.9 130 46.9
Ciclev10024719m.g Citrus clementina HOM05D000141 ORTHO05D004489 2.2e-26 122.9 130 47.7
FvH4_1g09831 Fragaria vesca HOM05D000141 ORTHO05D004489 2.2e-26 122.9 130 50.0
FAN23G0353 Fragaria x ananassa HOM05D000141 ORTHO05D004489 2.2e-26 122.9 130 48.5
Mapoly0012s0174 Marchantia polymorpha HOM05D000141 ORTHO05D004489 2.2e-26 122.9 114 50.9
MELO3C013702.2 Cucumis melo HOM05D000141 ORTHO05D004489 2.9e-26 122.5 130 46.2
CsaV3_3G000070 Cucumis sativus L. HOM05D000141 ORTHO05D004489 2.9e-26 122.5 130 46.2
FAN23G1938 Fragaria x ananassa HOM05D000141 ORTHO05D004489 2.9e-26 122.5 130 49.2
FAN26G1899 Fragaria x ananassa HOM05D000141 ORTHO05D004489 2.9e-26 122.5 130 49.2
Lj4g0000360 Lotus japonicus HOM05D000141 ORTHO05D004489 2.9e-26 122.5 115 53.0
Aqoxy6G03061 Aquilegia oxysepala HOM05D000141 ORTHO05D004489 3.8e-26 122.1 130 49.2
Os04g0666900 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D004489 3.8e-26 122.1 130 46.9
Potri.001G455300 Populus trichocarpa HOM05D000141 ORTHO05D004489 3.8e-26 122.1 120 50.8
Ah.03g149230 Amaranthus hybridus HOM05D000141 ORTHO05D004489 4.9e-26 121.7 130 45.4
Nn6g31557 Nelumbo nucifera HOM05D000141 ORTHO05D004489 4.9e-26 121.7 115 52.2
Potri.011G146700 Populus trichocarpa HOM05D000141 ORTHO05D004489 4.9e-26 121.7 120 51.7
Zm00001eb067080 Zea mays HOM05D000141 ORTHO05D004489 4.9e-26 121.7 130 48.5
Psat4g106800 Pisum sativum HOM05D000141 ORTHO05D004489 6.5e-26 121.3 120 49.2
Sed0006453 Sechium edule HOM05D000141 ORTHO05D004489 6.5e-26 121.3 115 50.4
GSVIVG01026414001 Vitis vinifera HOM05D000141 ORTHO05D004489 6.5e-26 121.3 115 51.3
Lalb_Chr16g0391741 Lupinus albus HOM05D000141 ORTHO05D004489 8.4e-26 120.9 115 51.3
MBI04_g23902_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 8.4e-26 120.9 115 53.0
vmacro20418 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 8.4e-26 120.9 120 50.8
MD02G1106300 Malus domestica HOM05D000141 ORTHO05D004489 1.1e-25 120.6 115 52.2
Solyc02g068340.3 Solanum lycopersicum HOM05D000141 ORTHO05D004489 1.1e-25 120.6 130 47.7
Sopen02g017470 Solanum pennellii HOM05D000141 ORTHO05D004489 1.1e-25 120.6 130 47.7
PGSC0003DMG400009428 Solanum tuberosum HOM05D000141 ORTHO05D004489 1.1e-25 120.6 130 47.7
Hma1.2p1_0085F.1_g044180 Hydrangea macrophylla HOM05D000141 ORTHO05D004489 1.4e-25 120.2 113 51.3
Peaxi162Scf00981g00112 Petunia axillaris HOM05D000141 ORTHO05D004489 1.4e-25 120.2 115 51.3
Glyma.01G155300 Glycine max HOM05D000141 ORTHO05D004489 1.9e-25 119.8 115 52.2
Pp3c15_3730 Physcomitrium patens HOM05D000141 ORTHO05D004489 1.9e-25 119.8 114 51.8
vmacro18483 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 2.5e-25 119.4 118 50.0
arahy.Tifrunner.gnm1.ann1.77JLPP Arachis hypogaea HOM05D000141 ORTHO05D004489 3.2e-25 119.0 120 50.0
arahy.Tifrunner.gnm1.ann1.L4A5BH Arachis hypogaea HOM05D000141 ORTHO05D004489 3.2e-25 119.0 120 50.0
CDE11G0155 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 3.2e-25 119.0 123 48.0
PSO170G4746 Papaver somniferum HOM05D000141 ORTHO05D004489 3.2e-25 119.0 120 50.8
Rhsim10G0188900 Rhododendron simsii HOM05D000141 ORTHO05D004489 3.2e-25 119.0 120 49.2
VMungo1215G2882 Vigna mungo HOM05D000141 ORTHO05D004489 3.2e-25 119.0 115 52.2
Lalb_Chr09g0324901 Lupinus albus HOM05D000141 ORTHO05D004489 4.2e-25 118.6 115 53.0
MBI01_g31984_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 4.2e-25 118.6 130 48.5
DCAR_000973 Daucus carota HOM05D000141 ORTHO05D004489 5.5e-25 118.2 120 48.3
Phvul.002G120200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 5.5e-25 118.2 115 51.3
Glyma.11G089400 Glycine max HOM05D000141 ORTHO05D004489 1.2e-24 117.1 115 50.4
THA.LOC104824715 Tarenaya hassleriana HOM05D000141 ORTHO05D004489 1.6e-24 116.7 120 50.0
BraA02t09381Z Brassica rapa HOM05D000141 ORTHO05D004489 2.1e-24 116.3 120 50.0
Thhalv10003527m.g Eutrema salsugineum HOM05D000141 ORTHO05D004489 2.1e-24 116.3 120 49.2
arahy.Tifrunner.gnm1.ann1.C6YA57 Arachis hypogaea HOM05D000141 ORTHO05D004489 2.7e-24 115.9 127 47.2
arahy.Tifrunner.gnm1.ann1.SMPN38 Arachis hypogaea HOM05D000141 ORTHO05D004489 2.7e-24 115.9 127 47.2
Carub.0008s2860 Capsella rubella HOM05D000141 ORTHO05D004489 3.5e-24 115.5 120 49.2
Ca_25026_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 3.5e-24 115.5 123 45.5
Sp2g30770 Schrenkiella parvula HOM05D000141 ORTHO05D004489 3.5e-24 115.5 120 49.2
BolC2t12563H Brassica oleracea HOM05D000141 ORTHO05D004489 6.0e-24 114.8 120 50.0
TWI31G1431 Tripterygium wilfordii HOM05D000141 ORTHO05D004489 6.0e-24 114.8 115 50.4
Aa31LG1G14480 Aethionema arabicum HOM05D000522 ORTHO05D004489 7.9e-24 114.4 120 48.3
AL8G45710 Arabidopsis lyrata HOM05D000141 ORTHO05D004489 7.9e-24 114.4 120 48.3
AT5G65930 Arabidopsis thaliana HOM05D000141 ORTHO05D004489 7.9e-24 114.4 120 48.3
CARHR053030 Cardamine hirsuta HOM05D000141 ORTHO05D004489 1.0e-23 114.0 130 44.6
Cc07_g12380 Coffea canephora HOM05D000141 ORTHO05D004489 1.0e-23 114.0 115 51.3
BcaB04g20133 Brassica carinata HOM05D000141 ORTHO05D004489 1.8e-23 113.2 120 48.3
Medtr5g025100 Medicago truncatula HOM05D000141 ORTHO05D004489 1.8e-23 113.2 130 45.4
BraA09t36670Z Brassica rapa HOM05D000141 ORTHO05D004489 2.3e-23 112.8 121 49.6
Lj2g0025271 Lotus japonicus HOM05D000141 ORTHO05D004489 2.3e-23 112.8 115 49.6
A09p10250 Brassica napus HOM05D000141 ORTHO05D004489 3.0e-23 112.5 121 49.6
Cre06.g278125 Chlamydomonas reinhardtii HOM05D000141 ORTHO05D004489 3.9e-23 112.1 122 46.7
CSS0002075 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 5.1e-23 111.7 120 45.8
Psat2g146880 Pisum sativum HOM05D000141 ORTHO05D004489 8.7e-23 110.9 130 44.6
BolC9t54106H Brassica oleracea HOM05D000141 ORTHO05D004489 1.5e-22 110.2 121 48.8
Pp3c11_5890 Physcomitrium patens HOM05D000141 ORTHO05D004489 1.5e-22 110.2 123 43.9
TPR.G33741 Trifolium pratense HOM05D000141 ORTHO05D004489 1.5e-22 110.2 115 49.6
unitig_748.g7256 Utricularia gibba HOM05D000141 ORTHO05D004489 1.9e-22 109.8 107 49.5
BcaC04g23100 Brassica carinata HOM05D000141 ORTHO05D004489 2.5e-22 109.4 121 47.9
C09p12180 Brassica napus HOM05D000141 ORTHO05D004489 2.5e-22 109.4 121 47.9
Rhsim08G0024500 Rhododendron simsii HOM05D000141 ORTHO05D004489 4.3e-22 108.6 132 43.9
CBR_g9092 Chara braunii HOM05D000141 ORTHO05D004489 5.7e-22 108.2 127 46.5
AUR62003324 Chenopodium quinoa HOM05D000141 ORTHO05D004489 9.6e-22 107.5 162 37.7
Pp3c2_29920 Physcomitrium patens HOM05D000141 ORTHO05D004489 2.8e-21 105.9 114 46.5
Dinv28284 Davidia involucrata HOM05D000141 ORTHO05D004489 1.8e-20 103.2 116 45.7
Nitab4.5_0000973g0040 Nicotiana tabacum HOM05D000141 ORTHO05D004489 1.8e-20 103.2 74 66.2
CBR_g8104 Chara braunii HOM05D000141 ORTHO05D004489 3.4e-19 99.0 127 43.3
MCO02G386 Micromonas commoda HOM05D000141 ORTHO05D004489 1.4e-17 93.6 110 42.7
HPP92_023789 Vanilla planifolia HOM05D000141 ORTHO05D004489 7.1e-17 91.3 115 38.3
Sabra16G0308000 Salix brachista HOM05D000141 ORTHO05D004489 2.1e-16 89.7 93 48.4
CDE02G4290 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 1.8e-15 86.7 115 40.9
SHI32496 Sapria himalayana HOM05D000141 ORTHO05D004489 2.2e-13 79.7 99 41.4
PRCOL_00006273 Prasinoderma coloniale HOM05D000141 ORTHO05D004489 1.8e-12 76.6 114 36.0
ClCG10G000070 Citrullus lanatus HOM05D000141 ORTHO05D004489 1.2e-11 73.9 130 33.1
CsaV3_UNG147160 Cucumis sativus L. HOM05D000141 ORTHO05D004489 2.0e-11 73.2 130 33.1
Nitab4.5_0017516g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004489 2.0e-11 73.2 78 44.9
Nitab4.5_0028853g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004489 2.0e-11 73.2 78 44.9
Hma1.2p1_0490F.1_g164200 Hydrangea macrophylla HOM05D000141 ORTHO05D004489 3.4e-11 72.4 99 39.4
MBI05_g40559_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 1.3e-10 70.5 98 37.8


User provided reference genes

Program Settings