Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 2.1e-143 512.3 254 100.0
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 2.1e-143 512.3 254 100.0
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 3.3e-80 302.4 230 61.3
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 4.4e-80 302.0 233 61.8
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 1.3e-79 300.4 231 60.6
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 3.7e-79 298.9 231 61.9
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 8.2e-79 297.7 232 62.9
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 1.8e-78 296.6 230 60.9
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 3.1e-78 295.8 231 61.5
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 5.3e-78 295.0 231 61.0
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 5.3e-78 295.0 234 62.4
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 7.0e-78 294.7 230 59.6
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 9.1e-78 294.3 231 59.7
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 1.2e-77 293.9 231 61.0
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 2.0e-77 293.1 230 59.1
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 2.7e-77 292.7 231 60.6
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.5e-77 292.4 233 61.8
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 4.5e-77 292.0 231 59.7
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 4.5e-77 292.0 231 59.7
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 7.7e-77 291.2 232 61.2
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 1.0e-76 290.8 230 59.6
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 1.0e-76 290.8 231 60.6
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.3e-76 290.4 233 61.8
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.3e-76 290.4 233 61.8
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 1.3e-76 290.4 231 60.6
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.7e-76 290.0 231 59.7
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 2.9e-76 289.3 233 60.1
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 5.0e-76 288.5 230 58.3
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 5.0e-76 288.5 230 58.3
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 5.0e-76 288.5 230 58.3
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 5.0e-76 288.5 231 58.9
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 6.5e-76 288.1 231 60.2
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 6.5e-76 288.1 233 59.2
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 6.5e-76 288.1 233 59.2
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 1.1e-75 287.3 231 59.3
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 1.9e-75 286.6 231 58.4
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 2.5e-75 286.2 230 57.8
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 3.2e-75 285.8 228 60.1
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 3.2e-75 285.8 232 59.5
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 4.2e-75 285.4 229 61.6
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 4.2e-75 285.4 233 57.9
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 4.2e-75 285.4 233 57.9
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 4.2e-75 285.4 231 58.0
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 4.2e-75 285.4 233 58.8
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 5.5e-75 285.0 231 57.6
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 7.2e-75 284.6 257 54.5
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 9.4e-75 284.3 232 57.8
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 9.4e-75 284.3 223 58.7
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 1.2e-74 283.9 230 60.0
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 2.1e-74 283.1 226 58.0
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 2.1e-74 283.1 226 58.0
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 2.1e-74 283.1 231 60.2
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 2.7e-74 282.7 238 56.7
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 3.6e-74 282.3 233 57.5
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 3.6e-74 282.3 230 59.6
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 6.1e-74 281.6 222 59.5
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 6.1e-74 281.6 251 55.8
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 6.1e-74 281.6 231 57.1
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 6.1e-74 281.6 234 58.5
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 8.0e-74 281.2 231 56.3
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 8.0e-74 281.2 231 58.0
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 1.0e-73 280.8 229 57.6
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.0e-73 280.8 231 58.0
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 1.0e-73 280.8 232 56.9
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 3.0e-73 279.3 231 58.0
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 4.0e-73 278.9 223 59.2
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 1.2e-72 277.3 232 57.3
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 2.0e-72 276.6 231 55.8
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 2.0e-72 276.6 215 62.3
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 4.4e-72 275.4 233 59.7
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 5.7e-72 275.0 231 56.7
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 1.3e-71 273.9 232 57.3
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 2.2e-71 273.1 231 58.4
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 3.7e-71 272.3 268 51.1
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 8.3e-71 271.2 229 57.6
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 5.4e-70 268.5 231 55.8
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 7.0e-70 268.1 232 53.9
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 1.2e-69 267.3 205 62.9
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 2.0e-69 266.5 204 62.3
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 2.0e-69 266.5 267 50.2
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 4.5e-69 265.4 235 57.0
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 5.9e-69 265.0 228 53.5
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 8.5e-68 261.2 260 49.6
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 1.5e-67 260.4 214 56.5
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 8.0e-66 254.6 231 54.1
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 4.0e-65 252.3 198 61.6
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 1.3e-63 247.3 197 59.9
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 4.1e-62 242.3 241 51.5
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 7.7e-61 238.0 183 61.7
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 2.3e-60 236.5 197 55.8
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 6.6e-60 235.0 188 59.6
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.9e-59 233.4 183 61.7
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 5.6e-59 231.9 196 57.1
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 4.7e-58 228.8 231 51.9
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 6.1e-58 228.4 193 56.0
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.8e-57 226.9 183 59.6
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 7.5e-56 221.5 191 57.1
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.0e-53 213.4 196 54.6
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 2.0e-53 213.4 165 60.6
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 5.9e-53 211.8 256 46.5
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 2.8e-50 203.0 171 55.0
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 1.1e-41 174.5 199 46.2
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 1.4e-38 164.1 227 40.1
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 2.1e-37 160.2 185 48.6
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 4.6e-37 159.1 148 50.7
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 4.6e-37 159.1 148 50.7
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 2.0e-32 143.7 136 52.2
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.3e-31 141.0 136 51.5
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 4.1e-30 136.0 91 68.1
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 4.3e-27 125.9 230 37.4
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 8.1e-26 121.7 233 36.1
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.4e-25 120.9 136 47.8
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 7.3e-19 98.6 76 61.8
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 7.6e-16 88.6 237 27.8
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 2.3e-12 77.0 94 45.7


User provided reference genes

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