Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 8.1e-138 493.8 261 100.0
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 6.5e-55 218.4 252 50.0
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 2.5e-54 216.5 254 48.8
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 8.0e-53 211.5 181 60.8
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 8.0e-53 211.5 235 51.1
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 2.3e-52 209.9 198 57.6
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 3.0e-52 209.5 258 48.4
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 3.0e-52 209.5 273 47.3
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 5.2e-52 208.8 201 55.2
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 1.5e-51 207.2 231 50.6
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 2.6e-51 206.5 199 54.3
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 4.4e-51 205.7 223 52.9
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 4.4e-51 205.7 182 56.6
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 9.8e-51 204.5 182 53.8
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 9.8e-51 204.5 182 54.4
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 9.8e-51 204.5 182 54.4
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 1.3e-50 204.1 206 53.4
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 1.7e-50 203.8 182 54.4
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 1.7e-50 203.8 229 47.6
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 1.7e-50 203.8 182 53.8
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 3.7e-50 202.6 227 50.2
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 3.7e-50 202.6 206 52.9
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 4.8e-50 202.2 182 53.8
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 4.8e-50 202.2 202 49.5
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 4.8e-50 202.2 182 53.8
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 8.3e-50 201.4 253 47.8
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 1.4e-49 200.7 206 52.4
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 3.1e-49 199.5 182 52.2
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 3.1e-49 199.5 182 52.2
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 3.1e-49 199.5 217 51.2
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 4.1e-49 199.1 183 52.5
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 4.1e-49 199.1 206 51.9
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 7.0e-49 198.4 242 46.3
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 7.0e-49 198.4 243 49.4
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 9.1e-49 198.0 182 55.5
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 1.2e-48 197.6 197 50.8
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 3.5e-48 196.1 207 53.1
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 3.5e-48 196.1 207 53.1
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 3.5e-48 196.1 193 56.0
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 4.5e-48 195.7 212 51.9
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 5.9e-48 195.3 197 53.8
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 1.0e-47 194.5 247 44.9
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.3e-47 194.1 233 48.5
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 1.7e-47 193.7 201 52.2
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 2.2e-47 193.4 213 50.2
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 2.9e-47 193.0 194 52.6
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 2.9e-47 193.0 224 49.1
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 3.8e-47 192.6 201 53.2
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 5.0e-47 192.2 198 53.0
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 6.5e-47 191.8 182 50.5
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 6.5e-47 191.8 182 54.4
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 6.5e-47 191.8 210 50.0
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.1e-46 191.0 211 52.6
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 1.5e-46 190.7 182 55.5
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.9e-46 190.3 198 52.0
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 2.5e-46 189.9 253 47.8
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 3.2e-46 189.5 214 47.2
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 3.2e-46 189.5 203 50.2
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 9.4e-46 188.0 210 48.1
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 1.2e-45 187.6 181 52.5
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 1.6e-45 187.2 210 48.6
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 4.7e-45 185.7 214 46.7
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 6.1e-45 185.3 204 50.0
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 8.0e-45 184.9 244 44.3
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 1.0e-44 184.5 175 55.4
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 1.4e-44 184.1 247 44.1
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 2.3e-44 183.3 223 49.8
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 3.0e-44 183.0 173 53.2
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 3.0e-44 183.0 206 50.0
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 5.2e-44 182.2 240 44.6
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 8.8e-44 181.4 239 45.6
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 1.2e-43 181.0 240 44.6
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 1.2e-43 181.0 240 44.6
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 1.2e-43 181.0 183 51.9
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 1.5e-43 180.6 180 53.3
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 3.4e-43 179.5 218 45.0
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 3.4e-43 179.5 223 46.6
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 3.4e-43 179.5 205 46.3
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 4.4e-43 179.1 243 46.5
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 7.5e-43 178.3 252 44.0
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.3e-42 177.6 217 47.9
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 1.3e-42 177.6 252 46.4
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 6.3e-42 175.3 239 45.2
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 8.3e-42 174.9 180 52.2
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 3.1e-41 172.9 235 45.1
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 7.0e-41 171.8 180 52.2
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 9.2e-41 171.4 277 41.5
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 3.8e-39 166.0 235 43.4
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 6.1e-37 158.7 207 43.5
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.0e-36 157.9 206 47.1
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 1.2e-35 154.5 200 44.0
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 2.6e-35 153.3 217 43.8
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 4.9e-34 149.1 198 44.9
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 6.4e-34 148.7 228 39.0
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 8.3e-34 148.3 183 45.9
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 1.1e-33 147.9 153 52.9
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 2.0e-32 143.7 99 65.7
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 1.0e-31 141.4 189 42.9
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 7.5e-27 125.2 135 51.9
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 2.7e-24 116.7 226 37.6
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 6.2e-21 105.5 149 43.6
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 2.9e-10 70.1 182 31.9


User provided reference genes

Program Settings