Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.8e-45 184.1 90 100.0
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.3e-31 138.7 89 80.9
SEGI_23588 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.5e-25 118.6 90 67.8
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 5.1e-24 114.8 88 71.6
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 3.5e-17 92.0 102 52.0
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 4.8e-14 81.6 106 49.1
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 6.2e-14 81.3 107 50.5
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 2.4e-13 79.3 54 75.9
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 2.4e-13 79.3 54 75.9
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 3.1e-13 79.0 87 49.4
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 2.0e-12 76.3 54 70.4
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 9.9e-12 73.9 87 48.3
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.3e-11 73.6 67 58.2
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.3e-11 73.6 88 51.1
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.7e-11 73.2 56 66.1
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.2e-11 72.8 96 46.9
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.9e-11 72.4 63 60.3
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.9e-11 72.4 91 47.3
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 3.8e-11 72.0 68 54.4
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 4.9e-11 71.6 94 46.8
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 6.4e-11 71.2 88 46.6
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 6.4e-11 71.2 44 75.0
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 1.1e-10 70.5 87 56.3
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.4e-10 70.1 68 52.9
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.9e-10 69.7 56 66.1
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.4e-10 69.3 62 56.5
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 3.2e-10 68.9 47 68.1
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.2e-10 68.9 75 52.0
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 3.2e-10 68.9 44 72.7
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 4.2e-10 68.6 55 65.5
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 4.2e-10 68.6 58 63.8
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 7.1e-10 67.8 91 46.2
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.6e-09 66.6 54 64.8
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 1.6e-09 66.6 44 72.7
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.7e-09 65.9 54 64.8
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 3.5e-09 65.5 86 45.3
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 3.5e-09 65.5 47 63.8
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.5e-09 65.5 53 64.2
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 3.5e-09 65.5 55 58.2
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.5e-09 65.5 53 64.2
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 3.5e-09 65.5 53 64.2
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 3.5e-09 65.5 67 55.2
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.0e-09 64.7 53 64.2
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 7.8e-09 64.3 85 47.1
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.8e-09 64.3 85 43.5
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 7.8e-09 64.3 54 63.0
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.0e-08 63.9 87 47.1
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 1.0e-08 63.9 50 68.0
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.3e-08 63.5 71 50.7
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.3e-08 63.5 108 40.7
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.3e-08 63.5 90 45.6
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.3e-08 63.5 46 69.6
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.3e-08 63.5 90 45.6
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.7e-08 63.2 57 52.6
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-08 63.2 59 59.3
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 2.3e-08 62.8 87 40.2
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.3e-08 62.8 77 46.8
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.3e-08 62.8 91 46.2
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 3.0e-08 62.4 85 48.2
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 3.9e-08 62.0 80 47.5
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 3.9e-08 62.0 56 55.4
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 5.1e-08 61.6 62 59.7
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 5.1e-08 61.6 46 67.4
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 5.1e-08 61.6 41 68.3
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 5.1e-08 61.6 60 56.7
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 5.1e-08 61.6 85 45.9
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.1e-08 61.6 66 53.0
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 6.6e-08 61.2 91 45.1
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 8.7e-08 60.8 60 50.0
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.1e-07 60.5 53 60.4
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 1.5e-07 60.1 50 58.0
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.5e-07 60.1 69 47.8
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.9e-07 59.7 49 61.2
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 1.9e-07 59.7 45 60.0
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.5e-07 59.3 47 59.6
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.5e-07 59.3 85 44.7
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.3e-07 58.9 92 41.3
Zm00001eb091920 Zea mays HOM05D002879 ORTHO05D002930 3.3e-07 58.9 59 54.2
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.3e-07 58.5 85 42.4
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 5.6e-07 58.2 50 56.0
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 5.6e-07 58.2 63 49.2
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.6e-07 58.2 46 54.3
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 5.6e-07 58.2 74 50.0
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 5.6e-07 58.2 69 52.2
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 5.6e-07 58.2 41 63.4
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 7.3e-07 57.8 47 63.8
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 7.3e-07 57.8 45 57.8
Os11g0167800 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 7.3e-07 57.8 55 56.4
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 9.6e-07 57.4 52 51.9
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 9.6e-07 57.4 92 41.3
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 9.6e-07 57.4 89 41.6
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.3e-06 57.0 59 55.9
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 1.3e-06 57.0 57 52.6
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.6e-06 56.6 48 60.4
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.6e-06 56.6 62 48.4
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.6e-06 56.6 44 56.8
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 1.6e-06 56.6 45 57.8
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 1.6e-06 56.6 83 44.6
TWI34G1982 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 1.6e-06 56.6 92 44.6
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 1.6e-06 56.6 55 58.2
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 2.1e-06 56.2 59 47.5
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.1e-06 56.2 47 61.7
SMO351G0439 Selaginella moellendorffii HOM05D002879 ORTHO05D002930 2.8e-06 55.8 46 63.0
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.8e-06 55.8 40 62.5
PGR044G2207 Punica granatum HOM05D002879 ORTHO05D002930 3.6e-06 55.5 100 38.0
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.6e-06 55.5 44 63.6
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.8e-06 55.1 40 62.5
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.2e-06 54.7 51 52.9
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.2e-06 54.7 49 57.1
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 8.1e-06 54.3 60 51.7
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 8.1e-06 54.3 46 60.9
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.1e-06 54.3 55 52.7


User provided reference genes

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