Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08824 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 2.8e-143 511.9 253 100.0
SEGI_36188 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 1.9e-128 462.6 253 90.1
SEGI_14651 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 5.6e-128 461.1 253 89.7
SEGI_32383 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 5.6e-128 461.1 253 89.7
SEGI_07312 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 7.3e-128 460.7 253 89.7
SEGI_34074 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 9.6e-120 433.7 252 84.9
SEGI_33499 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 1.5e-93 346.7 187 89.3
SEGI_30908 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 1.4e-65 253.8 134 93.3
SEGI_03955 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 3.3e-64 249.2 244 50.4
SMO116G0323 Selaginella moellendorffii HOM05D009553 ORTHO05D011773 9.7e-64 247.7 222 54.1
AagrBONN_evm.TU.Sc2ySwM_117.540 Anthoceros agrestis HOM05D009553 ORTHO05D011773 2.8e-63 246.1 239 51.5
Mapoly0138s0002 Marchantia polymorpha HOM05D009553 ORTHO05D011773 1.6e-61 240.4 249 52.6
SEGI_20598 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 6.1e-58 228.4 229 48.5
Pp3c9_19340 Physcomitrium patens HOM05D009553 ORTHO05D011773 2.3e-57 226.5 239 49.4
SEGI_07143 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 2.6e-56 223.0 248 45.6
SMO203G0272 Selaginella moellendorffii HOM05D009553 ORTHO05D011773 6.3e-55 218.4 223 50.7
SEGI_14017 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 4.1e-54 215.7 248 44.8
SEGI_35778 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 4.1e-54 215.7 248 44.8
AagrBONN_evm.TU.Sc2ySwM_340.2060 Anthoceros agrestis HOM05D009553 ORTHO05D011773 2.0e-45 186.8 169 53.8
SEGI_33090 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 1.4e-33 147.5 245 36.7
SEGI_24955 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 2.6e-32 143.3 152 48.0
AagrBONN_evm.TU.Sc2ySwM_369.326 Anthoceros agrestis HOM05D009553 ORTHO05D011773 9.8e-32 141.4 119 56.3
PRCOL_00003106 Prasinoderma coloniale HOM05D009553 ORTHO05D011773 2.4e-30 136.7 221 38.9
SEGI_20541 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 3.9e-28 129.4 132 48.5
MCO04G410 Micromonas commoda HOM05D009553 ORTHO05D011773 3.1e-25 119.8 200 35.5
SEGI_00603 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 1.7e-20 104.0 102 47.1
Cfa025341 Carpinus fangiana HOM05D009553 ORTHO05D011773 1.1e-17 94.7 213 27.7
PGR042G0235 Punica granatum HOM05D000573 ORTHO05D000425 2.3e-12 77.0 187 30.5
ECA234G0166 Erigeron canadensis HOM05D000573 ORTHO05D000425 6.6e-12 75.5 188 29.3
AagrBONN_evm.TU.Sc2ySwM_117.3184 Anthoceros agrestis HOM05D031665 ORTHO05D031133 8.7e-12 75.1 217 30.0
Lsat_1_v5_gn_5_112200 Lactuca sativa HOM05D000573 ORTHO05D000425 1.1e-11 74.7 188 29.8
Prupe.8G128100 Prunus persica HOM05D000573 ORTHO05D000425 1.1e-11 74.7 156 32.7
Psat0s2452g0080 Pisum sativum HOM05D000573 ORTHO05D000425 5.6e-11 72.4 157 31.8
ECA234G4511 Erigeron canadensis HOM05D000573 ORTHO05D000425 9.6e-11 71.6 180 27.8
Migut.A00398 Erythranthe guttata HOM05D000573 ORTHO05D000425 1.6e-10 70.9 195 28.7
Sopen08g002780 Solanum pennellii HOM05D000573 ORTHO05D000425 4.7e-10 69.3 170 29.4
vmacro10819 Vaccinium macrocarpon HOM05D000573 ORTHO05D000425 4.7e-10 69.3 215 27.9
Solyc08g006830.3 Solanum lycopersicum HOM05D000573 ORTHO05D000425 6.2e-10 68.9 205 28.3
Nitab4.5_0012293g0010 Nicotiana tabacum HOM05D000573 ORTHO05D000425 8.1e-10 68.6 170 30.0
PGSC0003DMG401026272 Solanum tuberosum HOM05D000573 ORTHO05D000425 8.1e-10 68.6 170 30.0
Thhalv10006151m.g Eutrema salsugineum HOM05D000573 ORTHO05D000425 1.1e-09 68.2 167 30.5
Peaxi162Scf00045g02123 Petunia axillaris HOM05D000573 ORTHO05D000425 1.1e-09 68.2 168 29.2
Zm00001eb199470 Zea mays HOM05D000573 ORTHO05D000425 1.1e-09 68.2 149 30.2
A09p54070 Brassica napus HOM05D000573 ORTHO05D000425 1.4e-09 67.8 167 30.5
BolC8t51272H Brassica oleracea HOM05D000573 ORTHO05D000425 1.4e-09 67.8 167 30.5
BraA09t40820Z Brassica rapa HOM05D000573 ORTHO05D000425 1.4e-09 67.8 167 30.5
Pp3c4_20870 Physcomitrium patens HOM05D000573 ORTHO05D000425 1.4e-09 67.8 147 31.3
BcaC07g42625 Brassica carinata HOM05D000573 ORTHO05D000425 1.8e-09 67.4 167 30.5
COL.COLO4_18236 Corchorus olitorius HOM05D000573 ORTHO05D000425 1.8e-09 67.4 167 28.1
CAN.G353.19 Capsicum annuum HOM05D000573 ORTHO05D000425 2.4e-09 67.0 170 29.4
Cc02_g30340 Coffea canephora HOM05D000573 ORTHO05D000425 2.4e-09 67.0 136 32.4
ECA240G4613 Erigeron canadensis HOM05D000573 ORTHO05D000425 2.4e-09 67.0 136 32.4
SEGI_27877 Sequoiadendron giganteum HOM05D009553 ORTHO05D011773 2.4e-09 67.0 70 40.0
Zm00001eb199490 Zea mays HOM05D000573 ORTHO05D000425 2.4e-09 67.0 136 34.6
Ah.02g112180 Amaranthus hybridus HOM05D000573 ORTHO05D000425 3.1e-09 66.6 167 28.7
BcaC07g40696 Brassica carinata HOM05D000573 ORTHO05D000425 3.1e-09 66.6 167 29.9
C08p36960 Brassica napus HOM05D000573 ORTHO05D000425 3.1e-09 66.6 167 29.9
Dinv36736 Davidia involucrata HOM05D000573 ORTHO05D000425 3.1e-09 66.6 146 29.5
Duzib168G1277 Durio zibethinus HOM05D000573 ORTHO05D000425 3.1e-09 66.6 144 28.5
THA.LOC104802110 Tarenaya hassleriana HOM05D000573 ORTHO05D000425 3.1e-09 66.6 167 30.5
GSVIVG01020603001 Vitis vinifera HOM05D000573 ORTHO05D000425 3.1e-09 66.6 168 29.8
AT3G62000 Arabidopsis thaliana HOM05D000573 ORTHO05D000425 4.0e-09 66.2 167 29.9
TAR375G0302 Trochodendron aralioides HOM05D000573 ORTHO05D000425 4.0e-09 66.2 167 31.1
Lj9A610G58 Lonicera japonica HOM05D000573 ORTHO05D000425 5.2e-09 65.9 167 29.3
Dinv42290 Davidia involucrata HOM05D000573 ORTHO05D000425 6.9e-09 65.5 146 29.5
Carub.0005s2875 Capsella rubella HOM05D000573 ORTHO05D000425 1.2e-08 64.7 167 28.7
CDE12G0122 Ceratophyllum demersum HOM05D000573 ORTHO05D000425 1.2e-08 64.7 167 29.3
Dinv32663 Davidia involucrata HOM05D000573 ORTHO05D000425 1.2e-08 64.7 167 29.3
Gorai.008G133100 Gossypium raimondii HOM05D000573 ORTHO05D000425 1.2e-08 64.7 167 31.1
unitig_699.g19813 Utricularia gibba HOM05D000573 ORTHO05D000425 1.2e-08 64.7 196 29.1
Atru.chr7.1530 Acer truncatum HOM05D000573 ORTHO05D000425 1.5e-08 64.3 145 29.7
AL5G44620 Arabidopsis lyrata HOM05D000573 ORTHO05D000425 1.5e-08 64.3 167 29.3
Ciclev10021579m.g Citrus clementina HOM05D000573 ORTHO05D000425 1.5e-08 64.3 167 29.3
ECA238G3901 Erigeron canadensis HOM05D000573 ORTHO05D000425 1.5e-08 64.3 167 29.3
Gohir.D12G122300 Gossypium hirsutum HOM05D000573 ORTHO05D000425 1.5e-08 64.3 167 31.1
Atru.chr7.1529 Acer truncatum HOM05D000573 ORTHO05D000425 2.0e-08 63.9 164 28.7
Ca_03460_v3 Cicer arietinum L. HOM05D000573 ORTHO05D000425 2.0e-08 63.9 196 28.1
HanXRQChr09g0238271 Helianthus annuus HOM05D000573 ORTHO05D000425 2.0e-08 63.9 163 27.0
Manes.01G237200 Manihot esculenta HOM05D000573 ORTHO05D000425 2.0e-08 63.9 167 29.3
arahy.Tifrunner.gnm1.ann1.AU4AKR Arachis hypogaea HOM05D000573 ORTHO05D000425 2.6e-08 63.5 171 32.2
PSO782G0926 Papaver somniferum HOM05D000573 ORTHO05D000425 2.6e-08 63.5 167 27.5
Rhsim05G0032300 Rhododendron simsii HOM05D000573 ORTHO05D000425 2.6e-08 63.5 150 28.0
Rhsim10G0083100 Rhododendron simsii HOM05D000573 ORTHO05D000425 2.6e-08 63.5 167 29.9
Cre01.g040300 Chlamydomonas reinhardtii HOM05D031665 ORTHO05D031133 3.4e-08 63.2 159 30.2
Gorai.004G283700 Gossypium raimondii HOM05D000573 ORTHO05D000425 3.4e-08 63.2 211 25.1
arahy.Tifrunner.gnm1.ann1.06014X Arachis hypogaea HOM05D000573 ORTHO05D000425 4.4e-08 62.8 171 32.2
Gohir.A08G244800 Gossypium hirsutum HOM05D000573 ORTHO05D000425 4.4e-08 62.8 210 25.2
HanXRQChr09g0238541 Helianthus annuus HOM05D000573 ORTHO05D000425 4.4e-08 62.8 148 28.4
Lsat_1_v5_gn_2_108380 Lactuca sativa HOM05D000573 ORTHO05D000425 4.4e-08 62.8 169 29.0
MBI04_g09826_MAGBIO Magnolia biondii HOM05D000573 ORTHO05D000425 4.4e-08 62.8 167 29.9
SalBow4G0535 Salvia bowleyana HOM05D000573 ORTHO05D000425 4.4e-08 62.8 207 27.1
Thecc.09G093800 Theobroma cacao HOM05D000573 ORTHO05D000425 4.4e-08 62.8 147 28.6
AUR62036299 Chenopodium quinoa HOM05D000573 ORTHO05D000425 5.8e-08 62.4 167 29.3
FAN16G3481 Fragaria x ananassa HOM05D000573 ORTHO05D000425 5.8e-08 62.4 169 29.6
RcHm_v2.0_Chr5g0027561 Rosa chinensis HOM05D000573 ORTHO05D000425 5.8e-08 62.4 169 29.6
TWI38G0193 Tripterygium wilfordii HOM05D000573 ORTHO05D000425 5.8e-08 62.4 105 34.3
HanXRQChr09g0238311 Helianthus annuus HOM05D000573 ORTHO05D000425 7.6e-08 62.0 147 27.2
vmacro10820 Vaccinium macrocarpon HOM05D000573 ORTHO05D000425 7.6e-08 62.0 167 29.3
ATR0579G089 Amborella trichopoda HOM05D000573 ORTHO05D000425 9.9e-08 61.6 136 32.4
MSTRG.10582 Avicennia marina HOM05D000573 ORTHO05D000425 9.9e-08 61.6 199 25.1
Cfa019448 Carpinus fangiana HOM05D000573 ORTHO05D000425 9.9e-08 61.6 168 29.2
Ciclev10009335m.g Citrus clementina HOM05D000573 ORTHO05D000425 9.9e-08 61.6 157 26.8
FvH4_3g16510 Fragaria vesca HOM05D000573 ORTHO05D000425 9.9e-08 61.6 169 29.6
FAN11G3936 Fragaria x ananassa HOM05D000573 ORTHO05D000425 9.9e-08 61.6 169 29.6
Glyma.08G175700 Glycine max HOM05D000573 ORTHO05D000425 9.9e-08 61.6 167 29.9
Gohir.A12G118500 Gossypium hirsutum HOM05D000573 ORTHO05D000425 9.9e-08 61.6 167 29.9
MD05G1209400 Malus domestica HOM05D000573 ORTHO05D000425 9.9e-08 61.6 167 28.1
Os08g0498100 Oryza sativa ssp. japonica HOM05D000573 ORTHO05D000425 9.9e-08 61.6 172 27.9
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 1.3e-07 61.2 167 29.3
Duzib187G1209 Durio zibethinus HOM05D000573 ORTHO05D000425 1.3e-07 61.2 149 27.5
Gohir.D08G265700 Gossypium hirsutum HOM05D000573 ORTHO05D000425 1.3e-07 61.2 210 25.2
Phvul.005G051900 Phaseolus vulgaris HOM05D000573 ORTHO05D000425 1.3e-07 61.2 167 29.9
CSS0019223 Camellia sinensis var. sinensis HOM05D000573 ORTHO05D000425 1.7e-07 60.8 134 30.6
CiPaw.12G045400 Carya illinoinensis HOM05D000573 ORTHO05D000425 1.7e-07 60.8 167 29.3
ECA240G1766 Erigeron canadensis HOM05D000573 ORTHO05D000425 1.7e-07 60.8 180 26.1
Lj3g0011456 Lotus japonicus HOM05D000573 ORTHO05D000425 1.7e-07 60.8 171 29.8
PSO063G4502 Papaver somniferum HOM05D000573 ORTHO05D000425 1.7e-07 60.8 136 29.4
EL10Ac5g11793 Beta vulgaris HOM05D000573 ORTHO05D000425 2.2e-07 60.5 167 29.3
HanXRQChr09g0238291 Helianthus annuus HOM05D000573 ORTHO05D000425 2.2e-07 60.5 147 26.5
PGR042G2428 Punica granatum HOM05D000573 ORTHO05D000425 2.2e-07 60.5 168 28.6
QL02p063408 Quercus lobata HOM05D000573 ORTHO05D000425 2.2e-07 60.5 130 30.8
Thecc.01G329200 Theobroma cacao HOM05D000573 ORTHO05D000425 2.2e-07 60.5 167 30.5
Atru.BG.73.p Acer truncatum HOM05D000573 ORTHO05D000425 2.9e-07 60.1 136 30.1
DCAR_020094 Daucus carota HOM05D000573 ORTHO05D000425 2.9e-07 60.1 187 27.3
DCAR_020095 Daucus carota HOM05D000573 ORTHO05D000425 2.9e-07 60.1 187 27.3
FAN21G2458 Fragaria x ananassa HOM05D000573 ORTHO05D000425 2.9e-07 60.1 169 29.6
FAN25G0530 Fragaria x ananassa HOM05D000573 ORTHO05D000425 2.9e-07 60.1 169 29.6
Hma1.2p1_0663F.1_g198670 Hydrangea macrophylla HOM05D000573 ORTHO05D000425 2.9e-07 60.1 178 24.7
QL04p071295 Quercus lobata HOM05D000573 ORTHO05D000425 2.9e-07 60.1 168 28.6
Sed0025257 Sechium edule HOM05D000573 ORTHO05D000425 2.9e-07 60.1 170 28.2
TPR.G29763 Trifolium pratense HOM05D000573 ORTHO05D000425 2.9e-07 60.1 167 29.3
GSVIVG01015246001 Vitis vinifera HOM05D000573 ORTHO05D000425 2.9e-07 60.1 149 27.5
arahy.Tifrunner.gnm1.ann1.I1NPUK Arachis hypogaea HOM05D000573 ORTHO05D000425 4.9e-07 59.3 131 29.8
CiPaw.04G152600 Carya illinoinensis HOM05D000573 ORTHO05D000425 4.9e-07 59.3 107 30.8
Duzib138G0303 Durio zibethinus HOM05D000573 ORTHO05D000425 4.9e-07 59.3 167 29.9
HanXRQChr07g0194631 Helianthus annuus HOM05D000573 ORTHO05D000425 6.4e-07 58.9 167 27.5
Nn1g00498 Nelumbo nucifera HOM05D000573 ORTHO05D000425 6.4e-07 58.9 136 30.9
SEGI_41027 Sequoiadendron giganteum HOM05D000573 ORTHO05D000425 6.4e-07 58.9 135 32.6
Thecc.09G093900 Theobroma cacao HOM05D000573 ORTHO05D000425 6.4e-07 58.9 113 31.9
Aqoxy5G04388 Aquilegia oxysepala HOM05D000573 ORTHO05D000425 8.4e-07 58.5 136 29.4
arahy.Tifrunner.gnm1.ann1.CIDH9E Arachis hypogaea HOM05D000573 ORTHO05D000425 8.4e-07 58.5 131 30.5
CsaV3_4G007750 Cucumis sativus L. HOM05D000573 ORTHO05D000425 8.4e-07 58.5 140 27.1
AT3G61990 Arabidopsis thaliana HOM05D000573 ORTHO05D000425 1.1e-06 58.2 167 29.3
CiPaw.04G152500 Carya illinoinensis HOM05D000573 ORTHO05D000425 1.1e-06 58.2 162 26.5
Eucgr.F04260 Eucalyptus grandis HOM05D000573 ORTHO05D000425 1.1e-06 58.2 167 28.1
MELO3C016162.2 Cucumis melo HOM05D000573 ORTHO05D000425 1.4e-06 57.8 182 28.0
ECA240G3300 Erigeron canadensis HOM05D000573 ORTHO05D000425 1.4e-06 57.8 129 27.9
QL02p063401 Quercus lobata HOM05D000573 ORTHO05D000425 1.4e-06 57.8 113 30.1
AL5G44610 Arabidopsis lyrata HOM05D000573 ORTHO05D000425 1.9e-06 57.4 167 29.3
GSVIVG01027486001 Vitis vinifera HOM05D000573 ORTHO05D000425 1.9e-06 57.4 167 28.1
Medtr2g070410 Medicago truncatula HOM05D000573 ORTHO05D000425 2.4e-06 57.0 167 27.5
Atru.chr5.815 Acer truncatum HOM05D000573 ORTHO05D000425 3.2e-06 56.6 119 29.4
CANSAT56G0351 Cannabis sativa HOM05D000573 ORTHO05D000425 3.2e-06 56.6 167 28.7
CARHR172350 Cardamine hirsuta HOM05D000573 ORTHO05D000425 3.2e-06 56.6 116 31.0
Mapoly0014s0073 Marchantia polymorpha HOM05D000573 ORTHO05D000425 3.2e-06 56.6 136 29.4
Rhsim05G0032000 Rhododendron simsii HOM05D000573 ORTHO05D000425 3.2e-06 56.6 145 26.9
Sp5g01360 Schrenkiella parvula HOM05D000573 ORTHO05D000425 3.2e-06 56.6 134 29.1
CAN.G697.7 Capsicum annuum HOM05D000573 ORTHO05D000425 4.2e-06 56.2 81 37.0
CiPaw.04G152900 Carya illinoinensis HOM05D000573 ORTHO05D000425 4.2e-06 56.2 112 30.4
ClCG07G010560 Citrullus lanatus HOM05D000573 ORTHO05D000425 4.2e-06 56.2 167 27.5
Zm00001eb416160 Zea mays HOM05D000573 ORTHO05D000425 4.2e-06 56.2 172 27.9
AUR62024120 Chenopodium quinoa HOM05D000573 ORTHO05D000425 5.4e-06 55.8 157 25.5
Prupe.7G214400 Prunus persica HOM05D000573 ORTHO05D000425 5.4e-06 55.8 166 28.3
Psat1g001520 Pisum sativum HOM05D000573 ORTHO05D000425 7.1e-06 55.5 131 29.0
MCO15G080 Micromonas commoda HOM05D000573 ORTHO05D000425 9.3e-06 55.1 140 30.7
QL02p063425 Quercus lobata HOM05D000573 ORTHO05D000425 9.3e-06 55.1 107 29.0
QL02p063430 Quercus lobata HOM05D000573 ORTHO05D000425 9.3e-06 55.1 106 31.1
SalBow1G5291 Salvia bowleyana HOM05D000573 ORTHO05D000425 9.3e-06 55.1 113 31.9
SalBow1G8029 Salvia bowleyana HOM05D000573 ORTHO05D000425 9.3e-06 55.1 113 31.9
SEGI_28912 Sequoiadendron giganteum HOM05D000573 ORTHO05D000425 9.3e-06 55.1 129 32.6
HPP92_005323 Vanilla planifolia HOM05D000573 ORTHO05D000425 9.3e-06 55.1 136 31.6


User provided reference genes

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