Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08791 Sequoiadendron giganteum HOM05D000832 ORTHO05D012435 1.1e-81 306.6 156 100.0
SEGI_07166 Sequoiadendron giganteum HOM05D000832 ORTHO05D012435 2.6e-11 72.8 40 90.0
SEGI_18352 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 2.6e-11 72.8 38 94.7
SEGI_03447 Sequoiadendron giganteum HOM05D000832 ORTHO05D012435 1.7e-10 70.1 38 92.1
SEGI_07779 Sequoiadendron giganteum HOM05D000832 ORTHO05D012435 8.5e-10 67.8 38 89.5
SEGI_10409 Sequoiadendron giganteum HOM05D000832 ORTHO05D000982 8.5e-10 67.8 38 92.1
SEGI_16832 Sequoiadendron giganteum HOM05D000832 ORTHO05D012435 1.9e-09 66.6 38 89.5
Gohir.A12G172900 Gossypium hirsutum HOM05D000832 ORTHO05D000982 2.5e-09 66.2 36 86.1
SEGI_29074 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 4.2e-09 65.5 38 86.8
SEGI_30741 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 4.2e-09 65.5 38 86.8
ATR0598G239 Amborella trichopoda HOM05D000832 ORTHO05D000982 1.2e-08 63.9 38 84.2
Gohir.D12G175500 Gossypium hirsutum HOM05D000832 ORTHO05D000982 1.2e-08 63.9 36 83.3
Gorai.008G187900 Gossypium raimondii HOM05D000832 ORTHO05D000982 1.2e-08 63.9 36 83.3
SEGI_11247 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 1.2e-08 63.9 38 84.2
Aqoxy3G03861 Aquilegia oxysepala HOM05D000832 ORTHO05D000982 2.1e-08 63.2 36 86.1
Aqoxy3G00432 Aquilegia oxysepala HOM05D000832 ORTHO05D000982 2.7e-08 62.8 43 72.1
Nn3g17670 Nelumbo nucifera HOM05D000832 ORTHO05D000982 2.7e-08 62.8 36 86.1
HPP92_011592 Vanilla planifolia HOM05D000832 ORTHO05D000982 3.6e-08 62.4 36 86.1
Cpa.g.sc1.236 Carica papaya HOM05D000832 ORTHO05D000982 4.7e-08 62.0 43 69.8
Dinv05809 Davidia involucrata HOM05D000832 ORTHO05D000982 4.7e-08 62.0 36 83.3
TAR702G0001 Trochodendron aralioides HOM05D000832 ORTHO05D000982 4.7e-08 62.0 36 83.3
Cfa008782 Carpinus fangiana HOM05D000832 ORTHO05D000982 6.1e-08 61.6 55 58.2
Haze_11794 Corylus avellana HOM05D000832 ORTHO05D000982 6.1e-08 61.6 55 58.2
Lj3A1022G56 Lonicera japonica HOM05D000832 ORTHO05D000982 6.1e-08 61.6 36 80.6
arahy.Tifrunner.gnm1.ann1.7GR9X4 Arachis hypogaea HOM05D000832 ORTHO05D013013 8.0e-08 61.2 36 83.3
BcaNung06368 Brassica carinata HOM05D000832 ORTHO05D000982 8.0e-08 61.2 40 75.0
A09p39680 Brassica napus HOM05D000832 ORTHO05D000982 8.0e-08 61.2 40 75.0
C05p24840 Brassica napus HOM05D000832 ORTHO05D000982 8.0e-08 61.2 40 75.0
BolC5t31213H Brassica oleracea HOM05D000832 ORTHO05D000982 8.0e-08 61.2 40 75.0
BraA09t39467Z Brassica rapa HOM05D000832 ORTHO05D000982 8.0e-08 61.2 40 75.0
Phvul.007G101300 Phaseolus vulgaris HOM05D000832 ORTHO05D000982 8.0e-08 61.2 44 72.7
Dinv16529 Davidia involucrata HOM05D000832 ORTHO05D000982 1.0e-07 60.8 36 80.6
PGR102G0673 Punica granatum HOM05D000832 ORTHO05D000982 1.0e-07 60.8 43 67.4
Thecc.02G363600 Theobroma cacao HOM05D000832 ORTHO05D000982 1.0e-07 60.8 36 80.6
TPR.G2687 Trifolium pratense HOM05D000832 ORTHO05D000982 1.0e-07 60.8 36 80.6
TAR371G0210 Trochodendron aralioides HOM05D000832 ORTHO05D000982 1.0e-07 60.8 36 83.3
AL1G39660 Arabidopsis lyrata HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
BcaC05g26646 Brassica carinata HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
BcaC05g26647 Brassica carinata HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
A07p31800 Brassica napus HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
C06p37340 Brassica napus HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
BolC6t38836H Brassica oleracea HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
BraA07t30807Z Brassica rapa HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
Carub.0001s2485 Capsella rubella HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
CARHR025810 Cardamine hirsuta HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
Ciclev10030580m.g Citrus clementina HOM05D000832 ORTHO05D000982 1.4e-07 60.5 42 66.7
Thhalv10006672m.g Eutrema salsugineum HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
Nn4g23672 Nelumbo nucifera HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 83.3
Sp5g23860 Schrenkiella parvula HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
SGA_v2.0_scaffold14G06799 Striga asiatica HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
GSVIVG01011979001 Vitis vinifera HOM05D000832 ORTHO05D000982 1.4e-07 60.5 36 80.6
CiPaw.05G116300 Carya illinoinensis HOM05D000832 ORTHO05D000982 1.8e-07 60.1 43 69.8
CDE07G1750 Ceratophyllum demersum HOM05D000832 ORTHO05D000982 1.8e-07 60.1 43 67.4
Lj6A768T59 Lonicera japonica HOM05D000832 ORTHO05D000982 1.8e-07 60.1 39 76.9
Lalb_Chr02g0151871 Lupinus albus HOM05D000832 ORTHO05D000982 1.8e-07 60.1 36 80.6
Manes.06G074600 Manihot esculenta HOM05D000832 ORTHO05D000982 1.8e-07 60.1 43 67.4
PSO478G2608 Papaver somniferum HOM05D000832 ORTHO05D000982 1.8e-07 60.1 39 76.9
Psat2g088840 Pisum sativum HOM05D000832 ORTHO05D000982 1.8e-07 60.1 36 77.8
TWI31G0281 Tripterygium wilfordii HOM05D000832 ORTHO05D000982 1.8e-07 60.1 55 56.4
Atru.chr11.1403 Acer truncatum HOM05D000832 ORTHO05D000982 2.3e-07 59.7 36 77.8
CiPaw.06G099100 Carya illinoinensis HOM05D000832 ORTHO05D000982 2.3e-07 59.7 36 80.6
Duzib248G1658 Durio zibethinus HOM05D000832 ORTHO05D000982 2.3e-07 59.7 36 77.8
Manes.14G095900 Manihot esculenta HOM05D000832 ORTHO05D000982 2.3e-07 59.7 36 77.8
Actinidia14835 Actinidia chinensis HOM05D000832 ORTHO05D000982 3.0e-07 59.3 35 82.9
ECA234G2274 Erigeron canadensis HOM05D000832 ORTHO05D000982 3.0e-07 59.3 49 65.3
Eucgr.B03067 Eucalyptus grandis HOM05D000832 ORTHO05D000982 3.0e-07 59.3 43 67.4
Medtr1g094010 Medicago truncatula HOM05D000832 ORTHO05D000982 3.0e-07 59.3 36 80.6
Psat6g181480 Pisum sativum HOM05D000832 ORTHO05D000982 3.0e-07 59.3 36 80.6
TPR.G9800 Trifolium pratense HOM05D000832 ORTHO05D000982 3.0e-07 59.3 36 80.6
vmacro10512 Vaccinium macrocarpon HOM05D000832 ORTHO05D000982 3.0e-07 59.3 36 80.6
Glyma.02G118180 Glycine max HOM05D000832 ORTHO05D013013 4.0e-07 58.9 36 80.6
Glyma.10G205500 Glycine max HOM05D000832 ORTHO05D000982 4.0e-07 58.9 36 80.6
AL2G27680 Arabidopsis lyrata HOM05D000832 ORTHO05D000982 5.2e-07 58.5 36 77.8
AT1G68750 Arabidopsis thaliana HOM05D000832 ORTHO05D000982 5.2e-07 58.5 36 77.8
CSS0044860 Camellia sinensis var. sinensis HOM05D000832 ORTHO05D000982 5.2e-07 58.5 35 80.0
Carub.0002s1530 Capsella rubella HOM05D000832 ORTHO05D000982 5.2e-07 58.5 36 77.8
CARHR061570 Cardamine hirsuta HOM05D000832 ORTHO05D000982 5.2e-07 58.5 36 77.8
Thhalv10018058m.g Eutrema salsugineum HOM05D000832 ORTHO05D000982 5.2e-07 58.5 36 77.8
MD13G1049200 Malus domestica HOM05D000832 ORTHO05D000982 5.2e-07 58.5 36 77.8
MD16G1050300 Malus domestica HOM05D000832 ORTHO05D000982 5.2e-07 58.5 36 77.8
VMungo0720G2531 Vigna mungo HOM05D000832 ORTHO05D000982 5.2e-07 58.5 36 77.8
Ca_10524_v3 Cicer arietinum L. HOM05D000832 ORTHO05D000982 6.7e-07 58.2 36 80.6
Cc11_g10810 Coffea canephora HOM05D000832 ORTHO05D000982 6.7e-07 58.2 36 77.8
Lj5g0020451 Lotus japonicus HOM05D000832 ORTHO05D000982 6.7e-07 58.2 36 77.8
ClCG01G005810 Citrullus lanatus HOM05D000832 ORTHO05D000982 8.8e-07 57.8 36 75.0
Peaxi162Scf00614g00038 Petunia axillaris HOM05D000832 ORTHO05D000982 8.8e-07 57.8 36 80.6
QL03p045000 Quercus lobata HOM05D000832 ORTHO05D000982 8.8e-07 57.8 39 74.4
Glyma.01G091000 Glycine max HOM05D000832 ORTHO05D000982 1.2e-06 57.4 35 80.0
Oeu024113.1 Olea europaea HOM05D000832 ORTHO05D000982 1.2e-06 57.4 36 80.6
Prupe.1G302700 Prunus persica HOM05D000832 ORTHO05D000982 1.2e-06 57.4 36 75.0
Glyma.02G118228 Glycine max HOM05D000832 ORTHO05D013013 1.5e-06 57.0 35 80.0
Glyma.02G130896 Glycine max HOM05D000832 ORTHO05D013013 1.5e-06 57.0 35 80.0
SHI24310 Sapria himalayana HOM05D000832 ORTHO05D000982 1.5e-06 57.0 36 72.2
Lj2g0012347 Lotus japonicus HOM05D000832 ORTHO05D000982 2.0e-06 56.6 36 72.2
SMO239G0149 Selaginella moellendorffii HOM05D000832 ORTHO05D000982 2.0e-06 56.6 36 77.8
MSTRG.2271 Avicennia marina HOM05D000832 ORTHO05D000982 2.6e-06 56.2 36 75.0
Hma1.2p1_0406F.1_g145940 Hydrangea macrophylla HOM05D000832 ORTHO05D000982 2.6e-06 56.2 36 75.0
SMO146G0010 Selaginella moellendorffii HOM05D000832 ORTHO05D000982 2.6e-06 56.2 36 77.8
AagrBONN_evm.TU.Sc2ySwM_344.1213 Anthoceros agrestis HOM05D000832 ORTHO05D000982 3.3e-06 55.8 39 71.8
CAN.G44.11 Capsicum annuum HOM05D000832 ORTHO05D000982 3.3e-06 55.8 36 77.8
MBI10_g18304_MAGBIO Magnolia biondii HOM05D000832 ORTHO05D000982 3.3e-06 55.8 43 65.1
Medtr0002s0890 Medicago truncatula HOM05D000832 ORTHO05D000982 3.3e-06 55.8 36 72.2
Nitab4.5_0000221g0050 Nicotiana tabacum HOM05D000832 ORTHO05D000982 3.3e-06 55.8 36 77.8
Nitab4.5_0003669g0010 Nicotiana tabacum HOM05D000832 ORTHO05D000982 3.3e-06 55.8 36 77.8
Os01g0110700 Oryza sativa ssp. japonica HOM05D000832 ORTHO05D000982 3.3e-06 55.8 36 77.8
Sed0007358 Sechium edule HOM05D000832 ORTHO05D000982 3.3e-06 55.8 36 72.2
arahy.Tifrunner.gnm1.ann1.WRC151 Arachis hypogaea HOM05D000832 ORTHO05D000982 4.4e-06 55.5 39 69.2
arahy.Tifrunner.gnm1.ann1.X6HICW Arachis hypogaea HOM05D000832 ORTHO05D000982 4.4e-06 55.5 39 69.2
HanXRQChr17g0568111 Helianthus annuus HOM05D000832 ORTHO05D000982 4.4e-06 55.5 49 63.3
Mapoly0033s0016 Marchantia polymorpha HOM05D000832 ORTHO05D000982 4.4e-06 55.5 36 75.0
Solyc04g006970.4 Solanum lycopersicum HOM05D000832 ORTHO05D000982 4.4e-06 55.5 43 65.1
Sopen04g002020 Solanum pennellii HOM05D000832 ORTHO05D000982 4.4e-06 55.5 43 65.1
VMungo1215G1721 Vigna mungo HOM05D000832 ORTHO05D000982 4.4e-06 55.5 35 77.1
MELO3C005348.2 Cucumis melo HOM05D000832 ORTHO05D000982 5.7e-06 55.1 36 72.2
Rhsim09G0114100 Rhododendron simsii HOM05D000832 ORTHO05D000982 5.7e-06 55.1 35 77.1
RcHm_v2.0_Chr4g0436201 Rosa chinensis HOM05D000832 ORTHO05D000982 5.7e-06 55.1 36 72.2
PGSC0003DMG400007466 Solanum tuberosum HOM05D000832 ORTHO05D000982 5.7e-06 55.1 43 62.8
COL.COLO4_07850 Corchorus olitorius HOM05D000832 ORTHO05D000982 7.5e-06 54.7 35 74.3
Phvul.003G024800 Phaseolus vulgaris HOM05D000832 ORTHO05D000982 7.5e-06 54.7 35 77.1
Sc04g0006860 Simmondsia chinensis HOM05D000832 ORTHO05D000982 7.5e-06 54.7 35 77.1
THA.LOC104808410 Tarenaya hassleriana HOM05D000832 ORTHO05D000982 7.5e-06 54.7 36 75.0


User provided reference genes

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