Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08787 Sequoiadendron giganteum HOM05D004846 ORTHO05D005630 6.0e-244 847.0 420 100.0
ATR0751G144 Amborella trichopoda HOM05D004846 ORTHO05D005630 1.7e-137 493.4 331 71.9
MBI15_g38527_MAGBIO Magnolia biondii HOM05D004846 ORTHO05D005630 9.6e-133 477.6 340 67.1
Dinv25698 Davidia involucrata HOM05D004846 ORTHO05D005630 7.6e-130 468.0 331 67.7
GSVIVG01027213001 Vitis vinifera HOM05D004846 ORTHO05D005630 5.5e-128 461.8 331 66.8
CiPaw.03G050100 Carya illinoinensis HOM05D004846 ORTHO05D005630 1.6e-127 460.3 331 65.0
PSO210G2938 Papaver somniferum HOM05D004846 ORTHO05D005630 2.1e-127 459.9 330 65.5
CSS0030635 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 2.7e-127 459.5 369 60.2
TAR371G0224 Trochodendron aralioides HOM05D004846 ORTHO05D005630 2.7e-127 459.5 330 66.1
Thecc.04G024900 Theobroma cacao HOM05D004846 ORTHO05D005630 8.7e-126 454.5 336 66.1
PSO210G2073 Papaver somniferum HOM05D004846 ORTHO05D005630 2.1e-124 449.9 330 65.2
COL.COLO4_29272 Corchorus olitorius HOM05D004846 ORTHO05D005630 8.2e-124 448.0 336 66.1
Eucgr.J02281 Eucalyptus grandis HOM05D004846 ORTHO05D005630 8.2e-124 448.0 331 65.0
CsaV3_3G046520 Cucumis sativus L. HOM05D004846 ORTHO05D005630 4.0e-123 445.7 334 64.7
Hma1.2p1_0279F.1_g112220 Hydrangea macrophylla HOM05D004846 ORTHO05D005630 5.3e-123 445.3 331 66.2
Haze_14810 Corylus avellana HOM05D004846 ORTHO05D005630 9.0e-123 444.5 331 62.8
Potri.001G338000 Populus trichocarpa HOM05D004846 ORTHO05D005630 9.0e-123 444.5 331 63.4
Dinv00597 Davidia involucrata HOM05D004846 ORTHO05D005630 1.2e-122 444.1 331 64.7
Atru.chr6.2483 Acer truncatum HOM05D004846 ORTHO05D005630 1.5e-122 443.7 324 64.5
Ciclev10014098m.g Citrus clementina HOM05D004846 ORTHO05D005630 2.0e-122 443.4 331 64.0
Cfa007283 Carpinus fangiana HOM05D004846 ORTHO05D005630 2.6e-122 443.0 331 63.1
MD17G1018500 Malus domestica HOM05D004846 ORTHO05D005630 1.0e-121 441.0 331 63.1
ClCG05G017040 Citrullus lanatus HOM05D004846 ORTHO05D005630 1.7e-121 440.3 334 64.4
QL02p072992 Quercus lobata HOM05D004846 ORTHO05D005630 1.7e-121 440.3 331 64.4
MELO3C003688.2 Cucumis melo HOM05D004846 ORTHO05D005630 2.2e-121 439.9 339 62.8
vmacro05920 Vaccinium macrocarpon HOM05D004846 ORTHO05D005630 2.9e-121 439.5 331 63.1
Lj3C906G17 Lonicera japonica HOM05D004846 ORTHO05D005630 4.9e-121 438.7 331 64.7
Prupe.3G299200 Prunus persica HOM05D004846 ORTHO05D005630 4.9e-121 438.7 372 57.8
Gohir.D10G085400 Gossypium hirsutum HOM05D004846 ORTHO05D005630 8.4e-121 438.0 330 66.1
HanXRQChr07g0193151 Helianthus annuus HOM05D004846 ORTHO05D005630 8.4e-121 438.0 335 61.5
Duzib187G0011 Durio zibethinus HOM05D004846 ORTHO05D005630 1.1e-120 437.6 330 65.8
Glyma.16G063300 Glycine max HOM05D004846 ORTHO05D005630 1.1e-120 437.6 331 63.1
Gorai.011G093300 Gossypium raimondii HOM05D004846 ORTHO05D005630 1.1e-120 437.6 330 66.1
Manes.15G092600 Manihot esculenta HOM05D004846 ORTHO05D005630 1.9e-120 436.8 316 66.1
PGR083G2372 Punica granatum HOM05D004846 ORTHO05D005630 4.2e-120 435.6 331 63.7
Sc09g0010530 Simmondsia chinensis HOM05D004846 ORTHO05D005630 4.2e-120 435.6 331 61.9
Zm00001eb308720 Zea mays HOM05D004846 ORTHO05D005630 5.5e-120 435.3 335 61.8
Gohir.A10G160700 Gossypium hirsutum HOM05D004846 ORTHO05D005630 9.3e-120 434.5 330 65.2
Actinidia05946 Actinidia chinensis HOM05D004846 ORTHO05D005630 1.2e-119 434.1 331 61.9
CANSAT64G0871 Cannabis sativa HOM05D004846 ORTHO05D005630 1.2e-119 434.1 331 63.1
Sed0008655 Sechium edule HOM05D004846 ORTHO05D005630 1.2e-119 434.1 334 63.8
Oeu062399.1 Olea europaea HOM05D004846 ORTHO05D005630 1.6e-119 433.7 339 61.7
Lsat_1_v5_gn_5_21981 Lactuca sativa HOM05D004846 ORTHO05D005630 2.7e-119 433.0 348 59.2
ECA233G5463 Erigeron canadensis HOM05D004846 ORTHO05D005630 3.5e-119 432.6 331 62.2
Rhsim10G0011500 Rhododendron simsii HOM05D004846 ORTHO05D005630 3.5e-119 432.6 326 62.9
Cc07_g00370 Coffea canephora HOM05D004846 ORTHO05D005630 4.6e-119 432.2 332 62.7
SalBow2G2965 Salvia bowleyana HOM05D004846 ORTHO05D005630 4.6e-119 432.2 377 58.4
TWI15G0720 Tripterygium wilfordii HOM05D004846 ORTHO05D005630 7.9e-119 431.4 337 63.8
Glyma.19G082100 Glycine max HOM05D004846 ORTHO05D005630 1.3e-118 430.6 331 63.1
VMungo1127G0826 Vigna mungo HOM05D004846 ORTHO05D005630 1.8e-118 430.3 343 60.6
TPR.G9064 Trifolium pratense HOM05D004846 ORTHO05D005630 2.3e-118 429.9 331 62.5
Os09g0266400 Oryza sativa ssp. japonica HOM05D004846 ORTHO05D005630 5.1e-118 428.7 338 60.7
FAN09G4064 Fragaria x ananassa HOM05D004846 ORTHO05D005630 1.1e-117 427.6 331 61.6
Nitab4.5_0001863g0210 Nicotiana tabacum HOM05D004846 ORTHO05D005630 1.1e-117 427.6 335 61.2
Phvul.008G148206 Phaseolus vulgaris HOM05D004846 ORTHO05D005630 1.5e-117 427.2 331 61.3
Sabra16G0218700 Salix brachista HOM05D004846 ORTHO05D005630 2.5e-117 426.4 346 59.2
FvH4_6g52480 Fragaria vesca HOM05D004846 ORTHO05D005630 3.3e-117 426.0 331 61.3
Sed0014062 Sechium edule HOM05D004846 ORTHO05D005630 3.3e-117 426.0 335 63.3
BcaC06g33832 Brassica carinata HOM05D004846 ORTHO05D005630 4.3e-117 425.6 334 62.3
C07p36370 Brassica napus HOM05D004846 ORTHO05D005630 4.3e-117 425.6 334 62.3
BolC7t44153H Brassica oleracea HOM05D004846 ORTHO05D005630 4.3e-117 425.6 334 62.3
Psat3g169160 Pisum sativum HOM05D004846 ORTHO05D005630 4.3e-117 425.6 331 61.9
Medtr7g037280 Medicago truncatula HOM05D004846 ORTHO05D005630 5.7e-117 425.2 331 61.3
DCAR_013672 Daucus carota HOM05D004846 ORTHO05D005630 9.7e-117 424.5 339 62.8
BcaC06g31008 Brassica carinata HOM05D004846 ORTHO05D005630 1.3e-116 424.1 334 61.7
FAN05G3122 Fragaria x ananassa HOM05D004846 ORTHO05D005630 1.3e-116 424.1 331 61.3
MD09G1017700 Malus domestica HOM05D004846 ORTHO05D005630 1.3e-116 424.1 331 60.7
FAN14G2722 Fragaria x ananassa HOM05D004846 ORTHO05D005630 2.8e-116 422.9 331 61.0
A06p41290 Brassica napus HOM05D004846 ORTHO05D005630 3.7e-116 422.5 334 62.0
BraA06t27054Z Brassica rapa HOM05D004846 ORTHO05D005630 3.7e-116 422.5 334 62.0
A02p35330 Brassica napus HOM05D004846 ORTHO05D005630 6.3e-116 421.8 357 58.8
Lalb_Chr24g0403411 Lupinus albus HOM05D004846 ORTHO05D005630 6.3e-116 421.8 331 61.3
Migut.H00055 Erythranthe guttata HOM05D004846 ORTHO05D005630 8.2e-116 421.4 330 61.5
FAN02G3962 Fragaria x ananassa HOM05D004846 ORTHO05D005630 8.2e-116 421.4 331 61.0
HanXRQChr02g0054051 Helianthus annuus HOM05D004846 ORTHO05D005630 8.2e-116 421.4 361 57.6
Sopen02g038410 Solanum pennellii HOM05D004846 ORTHO05D005630 8.2e-116 421.4 335 60.0
SGA_v2.0_scaffold135G34938 Striga asiatica HOM05D004846 ORTHO05D005630 8.2e-116 421.4 330 62.1
RcHm_v2.0_Chr2g0174121 Rosa chinensis HOM05D004846 ORTHO05D005630 1.1e-115 421.0 331 61.3
PGSC0003DMG403020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 1.1e-115 421.0 335 60.3
BraA02t08536Z Brassica rapa HOM05D004846 ORTHO05D005630 1.4e-115 420.6 357 58.0
C02p54070 Brassica napus HOM05D004846 ORTHO05D005630 1.8e-115 420.2 329 61.7
THA.LOC104805347 Tarenaya hassleriana HOM05D004846 ORTHO05D005630 2.4e-115 419.9 354 57.9
BolC2t11469H Brassica oleracea HOM05D004846 ORTHO05D005630 3.1e-115 419.5 329 61.4
Lj1g0007607 Lotus japonicus HOM05D004846 ORTHO05D005630 4.1e-115 419.1 331 60.4
Peaxi162Scf00420g00255 Petunia axillaris HOM05D004846 ORTHO05D005630 5.3e-115 418.7 334 59.6
Solyc02g093770.3 Solanum lycopersicum HOM05D004846 ORTHO05D005630 5.3e-115 418.7 335 59.7
EL10Ac2g04126 Beta vulgaris HOM05D004846 ORTHO05D005630 6.9e-115 418.3 331 60.1
PGSC0003DMG402020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 6.9e-115 418.3 317 62.1
Hund19592 Selenicereus undatus HOM05D004846 ORTHO05D005630 1.5e-114 417.2 331 60.1
CARHR040910 Cardamine hirsuta HOM05D004846 ORTHO05D005630 2.6e-114 416.4 363 57.6
SGA_v2.0_scaffold66G22277 Striga asiatica HOM05D004846 ORTHO05D005630 2.6e-114 416.4 330 61.2
arahy.Tifrunner.gnm1.ann1.QFX8QT Arachis hypogaea HOM05D004846 ORTHO05D005630 5.9e-114 415.2 341 58.7
Carub.0005s0560 Capsella rubella HOM05D004846 ORTHO05D005630 7.6e-114 414.8 330 61.8
Aa31LG2G5360 Aethionema arabicum HOM05D004846 ORTHO05D005630 1.0e-113 414.5 317 62.8
Mapoly0133s0025 Marchantia polymorpha HOM05D004846 ORTHO05D005630 1.0e-113 414.5 332 59.9
arahy.Tifrunner.gnm1.ann1.EI4BFE Arachis hypogaea HOM05D004846 ORTHO05D005630 1.3e-113 414.1 341 58.4
Thhalv10003555m.g Eutrema salsugineum HOM05D004846 ORTHO05D005630 6.5e-113 411.8 330 61.5
MSTRG.24063 Avicennia marina HOM05D004846 ORTHO05D005630 8.5e-113 411.4 316 62.3
AL5G16590 Arabidopsis lyrata HOM05D004846 ORTHO05D005630 2.5e-112 409.8 330 61.5
AT3G27325 Arabidopsis thaliana HOM05D004846 ORTHO05D005630 2.5e-112 409.8 329 61.7
CAN.G473.55 Capsicum annuum HOM05D004846 ORTHO05D005630 2.5e-112 409.8 335 58.5
Sp2g16490 Schrenkiella parvula HOM05D004846 ORTHO05D005630 9.3e-112 407.9 330 60.3
AUR62031596 Chenopodium quinoa HOM05D004846 ORTHO05D005630 4.6e-111 405.6 331 58.6
AUR62012470 Chenopodium quinoa HOM05D004846 ORTHO05D005630 1.0e-110 404.4 331 58.3
Ah.10g035510 Amaranthus hybridus HOM05D004846 ORTHO05D005630 3.9e-110 402.5 331 59.2
Gohir.D09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 1.1e-107 394.4 334 58.1
Gorai.006G037800 Gossypium raimondii HOM05D004846 ORTHO05D005630 1.1e-107 394.4 334 58.1
Gohir.A09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 1.3e-105 387.5 334 56.9
CDE02G2253 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 3.8e-105 386.0 347 54.8
Pp3c3_36830 Physcomitrium patens HOM05D004846 ORTHO05D005630 1.7e-100 370.5 332 54.8
Pp3c12_23520 Physcomitrium patens HOM05D004846 ORTHO05D005630 6.3e-100 368.6 336 53.6
AagrBONN_evm.TU.Sc2ySwM_228.569 Anthoceros agrestis HOM05D004846 ORTHO05D005630 7.7e-98 361.7 333 52.3
Cpa.g.sc130.45 Carica papaya HOM05D004846 ORTHO05D005630 1.0e-97 361.3 340 56.8
HPP92_021915 Vanilla planifolia HOM05D004846 ORTHO05D005630 6.7e-94 348.6 254 63.8
Nn7g36106 Nelumbo nucifera HOM05D004846 ORTHO05D005630 1.7e-92 344.0 234 70.5
SMO119G0307 Selaginella moellendorffii HOM05D004846 ORTHO05D005630 3.1e-91 339.7 340 49.4
Pp3c14_5780 Physcomitrium patens HOM05D004846 ORTHO05D005630 7.0e-91 338.6 336 50.9
CDE01G0149 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 4.8e-84 315.8 337 47.8
CSS0035751 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 5.0e-57 226.1 253 49.8
CSS0049777 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 7.3e-56 222.2 255 48.2
CSS0015891 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 8.6e-49 198.7 242 45.9
CSS0005966 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 1.2e-47 194.9 256 44.1
CBR_g922 Chara braunii HOM05D004846 ORTHO05D005630 1.4e-43 181.4 314 35.0
CSS0025976 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 3.0e-41 173.7 228 42.5
CSS0029627 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 3.0e-41 173.7 228 42.5
CSS0035603 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 3.0e-41 173.7 228 42.5
CSS0012369 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 2.5e-40 170.6 228 42.1
CSS0050182 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 2.5e-40 170.6 228 42.1
CSS0012376 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 2.1e-34 151.0 238 39.1
unitig_748.g6967 Utricularia gibba HOM05D004846 ORTHO05D005630 3.9e-33 146.7 144 50.7
CSS0003755 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 1.5e-32 144.8 228 39.0
unitig_1.g29345 Utricularia gibba HOM05D004846 ORTHO05D005630 1.4e-30 138.3 130 53.1
unitig_747.g22069 Utricularia gibba HOM05D004846 ORTHO05D005630 1.4e-30 138.3 130 53.1
Ca_30652_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 2.4e-19 100.9 81 56.8
SEGI_00023 Sequoiadendron giganteum HOM05D000141 ORTHO05D004993 1.6e-18 98.2 56 83.9
Ca_26612_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 4.6e-18 96.7 82 56.1
HanXRQChr02g0047501 Helianthus annuus HOM05D004846 ORTHO05D005630 3.7e-15 87.0 55 70.9
SEGI_11826 Sequoiadendron giganteum HOM05D003114 ORTHO05D003519 1.9e-08 64.7 80 52.5
SEGI_38886 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.4e-06 58.5 39 71.8
SHI03857 Sapria himalayana HOM05D004846 ORTHO05D000023 6.9e-06 56.2 75 37.3


User provided reference genes

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