Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08752 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 0.0e+00 1354.0 682 100.0
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 5.0e-115 419.5 677 39.4
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 3.6e-113 413.3 678 37.8
SEGI_37730 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 4.0e-112 409.8 291 71.8
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 1.2e-111 408.3 675 38.1
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 1.2e-111 408.3 674 38.3
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 1.4e-109 401.4 678 36.6
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 1.9e-109 401.0 673 37.3
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 6.0e-108 396.0 674 37.1
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 7.8e-108 395.6 678 36.3
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 7.8e-108 395.6 675 37.2
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 6.6e-107 392.5 673 38.3
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 4.3e-106 389.8 673 37.9
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 5.6e-106 389.4 673 38.2
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 4.7e-105 386.3 676 38.0
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 1.4e-104 384.8 676 38.0
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 5.2e-104 382.9 673 37.6
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 4.4e-103 379.8 673 37.0
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 7.6e-103 379.0 674 36.9
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 1.3e-102 378.3 676 36.8
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 2.2e-102 377.5 658 37.7
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 2.2e-102 377.5 677 37.1
Haze_25135 Corylus avellana HOM05D005030 ORTHO05D006490 2.9e-102 377.1 681 36.3
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 3.2e-101 373.6 674 35.9
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 3.5e-100 370.2 672 36.5
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 4.6e-100 369.8 674 36.5
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 6.0e-100 369.4 674 35.6
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 3.9e-99 366.7 673 35.4
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 3.9e-99 366.7 673 35.7
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 6.6e-99 365.9 680 35.7
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 1.9e-98 364.4 673 35.5
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 3.3e-98 363.6 673 35.7
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 9.6e-98 362.1 675 36.6
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 9.6e-98 362.1 675 36.6
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 9.6e-98 362.1 675 36.6
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 9.6e-98 362.1 675 36.0
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 9.6e-98 362.1 675 35.6
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 1.6e-97 361.3 679 34.5
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 2.1e-97 360.9 674 36.1
Cpa.g.sc42.108 Carica papaya HOM05D005030 ORTHO05D006490 2.1e-97 360.9 678 36.1
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 2.1e-97 360.9 678 35.8
MSTRG.2677 Avicennia marina HOM05D005030 ORTHO05D006490 4.7e-97 359.8 679 35.9
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 8.1e-97 359.0 675 35.3
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 1.4e-96 358.2 674 35.5
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 2.4e-96 357.5 676 35.4
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 4.0e-96 356.7 679 35.8
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 8.9e-96 355.5 673 35.4
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 1.2e-95 355.1 674 34.4
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 1.2e-95 355.1 679 36.2
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 2.6e-95 354.0 673 35.7
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 3.4e-95 353.6 673 36.6
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 3.4e-95 353.6 673 34.6
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 5.8e-95 352.8 674 36.2
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 2.2e-94 350.9 674 36.6
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 4.9e-94 349.7 674 34.9
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 6.4e-94 349.4 673 35.1
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 1.1e-93 348.6 673 34.2
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 1.9e-93 347.8 673 34.5
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 2.4e-93 347.4 679 35.5
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 2.4e-93 347.4 686 35.0
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 4.2e-93 346.7 673 35.1
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 9.3e-93 345.5 674 34.4
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 1.2e-92 345.1 679 34.6
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 3.5e-92 343.6 674 34.9
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 6.0e-92 342.8 673 34.6
CiPaw.03G127200 Carya illinoinensis HOM05D005030 ORTHO05D006490 7.8e-92 342.4 679 35.3
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 1.7e-91 341.3 674 35.0
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 1.7e-91 341.3 752 31.8
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 1.1e-90 338.6 679 33.0
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 1.9e-90 337.8 673 32.8
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 2.5e-90 337.4 672 34.7
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 2.5e-90 337.4 677 35.2
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 2.5e-90 337.4 680 33.5
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 1.3e-89 335.1 677 34.9
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 2.1e-89 334.3 724 32.9
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 2.8e-89 334.0 672 35.0
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 8.1e-89 332.4 685 34.5
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 3.1e-88 330.5 716 33.0
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 4.0e-88 330.1 674 34.4
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 4.0e-88 330.1 671 33.7
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 5.3e-88 329.7 701 33.8
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 2.0e-87 327.8 709 33.0
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 5.8e-87 326.2 424 43.9
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 1.4e-85 321.6 669 35.1
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.4e-85 321.6 701 33.0
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 5.4e-85 319.7 666 33.9
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 1.6e-84 318.2 698 33.1
CAN.G802.6 Capsicum annuum HOM05D005030 ORTHO05D006490 2.7e-84 317.4 591 35.5
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 4.6e-84 316.6 656 32.9
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 1.9e-82 311.2 754 32.9
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 6.2e-81 306.2 713 33.4
MD09G1255500 Malus domestica HOM05D005030 ORTHO05D006490 8.4e-78 295.8 654 33.0
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 3.5e-76 290.4 700 30.4
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 4.6e-76 290.0 699 32.3
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 1.3e-75 288.5 745 31.5
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 1.9e-74 284.6 674 32.8
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 1.4e-72 278.5 476 37.0
Zm00001eb192940 Zea mays HOM05D005030 ORTHO05D006490 7.9e-68 262.7 312 46.8
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 1.1e-64 252.3 684 29.4
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 1.4e-64 251.9 436 37.2
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 2.3e-59 234.6 442 34.8
Manes.12G152000 Manihot esculenta HOM05D005030 ORTHO05D006490 3.0e-59 234.2 308 44.2
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 1.1e-58 232.3 675 29.0
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 1.1e-58 232.3 671 28.9
Os02g0784100 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 3.8e-54 217.2 237 49.8
TAR381G0402 Trochodendron aralioides HOM05D005030 ORTHO05D006490 5.0e-54 216.9 230 47.4
AagrBONN_evm.TU.Sc2ySwM_228.5700 Anthoceros agrestis HOM05D005030 ORTHO05D006490 3.9e-51 207.2 272 40.8
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 5.7e-50 203.4 480 29.2
Thecc.01G125300 Theobroma cacao HOM05D005030 ORTHO05D006490 1.5e-34 152.1 206 42.2
CBR_g36665 Chara braunii HOM05D005030 ORTHO05D006490 7.0e-32 143.3 424 26.2
TAR381G0325 Trochodendron aralioides HOM05D005030 ORTHO05D006490 1.3e-30 139.0 230 37.8
SEGI_13201 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.7e-28 131.3 66 100.0
vmacro12845 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 1.4e-27 129.0 405 28.4
SEGI_13008 Sequoiadendron giganteum HOM05D005030 ORTHO05D050943 1.4e-24 119.0 74 75.7
PGSC0003DMG400025561 Solanum tuberosum HOM05D005030 ORTHO05D006490 2.7e-20 104.8 345 25.2
MD17G1248600 Malus domestica HOM05D005030 ORTHO05D006490 8.0e-20 103.2 282 29.4
vmacro12844 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 9.8e-18 96.3 175 34.3
BcaNung06136 Brassica carinata HOM05D005030 ORTHO05D006490 5.9e-15 87.0 298 28.5
Hma1.2p1_0006F.1_g004730 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 4.1e-08 64.3 137 33.6


User provided reference genes

Program Settings