Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08644 Sequoiadendron giganteum HOM05D001587 ORTHO05D014867 3.7e-61 238.0 121 100.0
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 5.4e-20 101.3 72 65.3
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 7.0e-20 100.9 77 61.0
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 9.2e-20 100.5 72 63.9
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 9.2e-20 100.5 77 62.3
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 2.0e-19 99.4 72 63.9
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 2.7e-19 99.0 72 63.9
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 3.5e-19 98.6 77 62.3
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 4.6e-19 98.2 72 65.3
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 4.6e-19 98.2 77 59.7
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 4.6e-19 98.2 77 61.0
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 4.6e-19 98.2 77 59.7
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 7.8e-19 97.4 72 63.9
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 7.8e-19 97.4 72 63.9
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 1.0e-18 97.1 72 63.9
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 1.0e-18 97.1 72 63.9
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 1.0e-18 97.1 72 63.9
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 1.0e-18 97.1 77 59.7
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 1.0e-18 97.1 72 63.9
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 1.3e-18 96.7 83 56.6
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 1.7e-18 96.3 77 58.4
AL1G52690 Arabidopsis lyrata HOM05D001587 ORTHO05D014867 2.3e-18 95.9 71 62.0
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 2.3e-18 95.9 87 55.2
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 3.0e-18 95.5 75 60.0
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 3.0e-18 95.5 72 62.5
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 3.0e-18 95.5 72 61.1
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 3.0e-18 95.5 77 55.8
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 3.0e-18 95.5 77 59.7
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 5.0e-18 94.7 72 61.1
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 6.6e-18 94.4 74 60.8
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 8.6e-18 94.0 77 57.1
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 1.1e-17 93.6 77 57.1
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 1.1e-17 93.6 77 57.1
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 1.1e-17 93.6 77 57.1
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 1.1e-17 93.6 77 55.8
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 1.1e-17 93.6 77 59.7
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 1.1e-17 93.6 87 54.0
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 1.1e-17 93.6 77 57.1
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 1.1e-17 93.6 77 54.5
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 1.1e-17 93.6 75 61.3
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 1.1e-17 93.6 77 55.8
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 1.5e-17 93.2 77 57.1
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 1.5e-17 93.2 77 57.1
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 1.5e-17 93.2 77 58.4
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 1.9e-17 92.8 77 57.1
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 3.3e-17 92.0 77 55.8
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 3.3e-17 92.0 87 54.0
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 3.3e-17 92.0 77 57.1
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 4.3e-17 91.7 77 57.1
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 7.3e-17 90.9 77 53.2
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 9.5e-17 90.5 77 53.2
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 1.2e-16 90.1 77 55.8
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 1.6e-16 89.7 77 55.8
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 1.6e-16 89.7 72 58.3
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 1.6e-16 89.7 72 58.3
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 2.1e-16 89.4 77 53.2
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 2.1e-16 89.4 87 50.6
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 2.8e-16 89.0 77 57.1
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 3.6e-16 88.6 77 51.9
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 3.6e-16 88.6 76 52.6
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 4.7e-16 88.2 72 59.7
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 4.7e-16 88.2 81 49.4
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 4.7e-16 88.2 77 54.5
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 6.2e-16 87.8 77 51.9
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 6.2e-16 87.8 87 49.4
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 6.2e-16 87.8 77 54.5
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 6.2e-16 87.8 77 51.9
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 8.1e-16 87.4 77 54.5
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 8.1e-16 87.4 77 51.9
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 8.1e-16 87.4 77 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 1.1e-15 87.0 73 57.5
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 1.4e-15 86.7 77 50.6
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 1.4e-15 86.7 87 50.6
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 1.4e-15 86.7 77 51.9
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 1.4e-15 86.7 77 51.9
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 1.8e-15 86.3 72 56.9
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 1.8e-15 86.3 77 51.9
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 1.8e-15 86.3 77 51.9
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 1.8e-15 86.3 77 54.5
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 2.3e-15 85.9 87 49.4
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 4.0e-15 85.1 77 50.6
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 5.2e-15 84.7 77 51.9
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 8.9e-15 84.0 75 53.3
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 8.9e-15 84.0 76 53.9
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 1.5e-14 83.2 77 50.6
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 2.0e-14 82.8 88 46.6
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 2.6e-14 82.4 77 54.5
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 3.4e-14 82.0 87 49.4
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 3.4e-14 82.0 72 56.9
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 4.4e-14 81.6 94 44.7
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 4.4e-14 81.6 97 44.3
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 7.5e-14 80.9 76 52.6
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 1.3e-13 80.1 55 65.5
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 6.4e-13 77.8 72 52.8
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 3.2e-12 75.5 113 38.1
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla HOM05D001587 ORTHO05D014867 9.2e-12 73.9 69 52.2
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 9.2e-12 73.9 74 50.0
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 2.1e-11 72.8 77 46.8
CARHR174630 Cardamine hirsuta HOM05D001587 ORTHO05D014867 3.9e-10 68.6 57 57.9
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 1.9e-09 66.2 71 47.9
CSS0046073 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.5e-09 65.9 62 54.8
CSS0002416 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 4.3e-09 65.1 65 50.8
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 7.3e-09 64.3 127 31.5
CSS0001111 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.2e-08 63.5 62 53.2
CSS0020626 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.2e-08 63.5 62 53.2
CSS0029664 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.2e-08 63.5 62 53.2
CSS0031048 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.2e-08 63.5 62 53.2
CSS0048350 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.2e-08 63.5 62 53.2
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 2.8e-08 62.4 63 44.4
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 2.8e-08 62.4 63 44.4
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 4.7e-08 61.6 62 46.8
CSS0016398 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 8.1e-08 60.8 62 51.6
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 3.1e-07 58.9 63 46.0
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 2.6e-06 55.8 76 39.5


User provided reference genes

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