Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08629 Sequoiadendron giganteum HOM05D001755 ORTHO05D001665 4.8e-274 947.2 472 100.0
SEGI_08574 Sequoiadendron giganteum HOM05D001755 ORTHO05D001665 5.0e-37 159.8 495 31.5
COL.COLO4_35196 Corchorus olitorius HOM05D001755 ORTHO05D001665 1.1e-12 79.0 331 26.6
Gohir.A06G032636 Gossypium hirsutum HOM05D001755 ORTHO05D001665 2.5e-12 77.8 334 28.4
SMO230G0062 Selaginella moellendorffii HOM05D001755 ORTHO05D001665 3.3e-12 77.4 344 25.6
Mapoly0048s0099 Marchantia polymorpha HOM05D000850 ORTHO05D000266 3.6e-11 73.9 365 26.6
AUR62019010 Chenopodium quinoa HOM05D001755 ORTHO05D001665 6.1e-11 73.2 213 29.6
MD08G1192900 Malus domestica HOM05D001755 ORTHO05D001665 8.0e-11 72.8 213 29.6
Gohir.D06G032600 Gossypium hirsutum HOM05D001755 ORTHO05D001665 1.0e-10 72.4 339 27.7
Thecc.08G067700 Theobroma cacao HOM05D001755 ORTHO05D001665 2.3e-10 71.2 334 26.9
AUR62027851 Chenopodium quinoa HOM05D001755 ORTHO05D001665 4.0e-10 70.5 212 29.7
DCAR_012866 Daucus carota HOM05D001755 ORTHO05D001665 1.2e-09 68.9 338 24.3
TAR376G0504 Trochodendron aralioides HOM05D001755 ORTHO05D001665 2.0e-09 68.2 340 27.4
HPP92_004086 Vanilla planifolia HOM05D001755 ORTHO05D001665 2.0e-09 68.2 212 31.1
HPP92_004103 Vanilla planifolia HOM05D001755 ORTHO05D001665 2.0e-09 68.2 212 31.1
MD15G1381700 Malus domestica HOM05D001755 ORTHO05D001665 5.7e-09 66.6 234 26.5
Duzib116G0593 Durio zibethinus HOM05D001755 ORTHO05D001665 7.5e-09 66.2 212 30.2
Duzib041G0605 Durio zibethinus HOM05D001755 ORTHO05D001665 9.8e-09 65.9 342 27.5
TAR628G0401 Trochodendron aralioides HOM05D001755 ORTHO05D001665 1.3e-08 65.5 338 26.9
Duzib093G0625 Durio zibethinus HOM05D001755 ORTHO05D001665 1.7e-08 65.1 344 24.4
Prupe.1G527600 Prunus persica HOM05D001755 ORTHO05D001665 1.7e-08 65.1 216 28.7
Os01g0626900 Oryza sativa ssp. japonica HOM05D004468 ORTHO05D008180 4.9e-08 63.5 358 24.6
Ciclev10003472m.g Citrus clementina HOM05D001755 ORTHO05D001665 8.3e-08 62.8 215 28.4
Phvul.002G194400 Phaseolus vulgaris HOM05D004468 ORTHO05D008180 2.4e-07 61.2 78 38.5
CiPaw.09G126600 Carya illinoinensis HOM05D004468 ORTHO05D008180 4.1e-07 60.5 356 23.3
Glyma.05G129400 Glycine max HOM05D004468 ORTHO05D008180 4.1e-07 60.5 77 37.7
Sabra02G0081000 Salix brachista HOM05D001755 ORTHO05D001665 4.1e-07 60.5 210 28.1
arahy.Tifrunner.gnm1.ann1.ZL8253 Arachis hypogaea HOM05D001755 ORTHO05D001665 5.4e-07 60.1 368 23.4
ClCG10G009540 Citrullus lanatus HOM05D001755 ORTHO05D001665 5.4e-07 60.1 339 26.5
Cc10_g15590 Coffea canephora HOM05D001755 ORTHO05D001665 5.4e-07 60.1 216 28.2
TAR629G0415 Trochodendron aralioides HOM05D004468 ORTHO05D008180 5.4e-07 60.1 54 48.1
HPP92_027236 Vanilla planifolia HOM05D001755 ORTHO05D001665 7.0e-07 59.7 217 29.5
VMungo0251G1661 Vigna mungo HOM05D004468 ORTHO05D008180 7.0e-07 59.7 82 34.1
CiPaw.07G168200 Carya illinoinensis HOM05D001755 ORTHO05D001665 1.2e-06 58.9 215 26.5
Hund16874 Selenicereus undatus HOM05D001755 ORTHO05D001665 1.2e-06 58.9 214 27.6
Actinidia10367 Actinidia chinensis HOM05D001755 ORTHO05D001665 1.6e-06 58.5 213 27.2
Aqoxy1G01779 Aquilegia oxysepala HOM05D004468 ORTHO05D008180 1.6e-06 58.5 350 22.6
Aqoxy6G01464 Aquilegia oxysepala HOM05D001755 ORTHO05D001665 2.0e-06 58.2 211 27.5
arahy.Tifrunner.gnm1.ann1.2E3FWC Arachis hypogaea HOM05D004468 ORTHO05D008180 2.0e-06 58.2 53 45.3
Peaxi162Scf00160g01119 Petunia axillaris HOM05D001755 ORTHO05D001665 2.0e-06 58.2 212 28.3
Sc01g0001030 Simmondsia chinensis HOM05D001755 ORTHO05D001665 2.0e-06 58.2 210 27.6
Aqoxy5G01330 Aquilegia oxysepala HOM05D001755 ORTHO05D001665 3.5e-06 57.4 208 27.9
MBI02_g18287_MAGBIO Magnolia biondii HOM05D001755 ORTHO05D001665 3.5e-06 57.4 326 25.2
MBI06_g42716_MAGBIO Magnolia biondii HOM05D001755 ORTHO05D001665 3.5e-06 57.4 308 25.3
ATR0022G065 Amborella trichopoda HOM05D001755 ORTHO05D001665 4.5e-06 57.0 220 28.2
FAN04G1269 Fragaria x ananassa HOM05D001755 ORTHO05D001665 4.5e-06 57.0 213 29.6
Peaxi162Scf00281g00710 Petunia axillaris HOM05D001755 ORTHO05D001665 4.5e-06 57.0 212 26.9
Potri.005G158100 Populus trichocarpa HOM05D001755 ORTHO05D001665 4.5e-06 57.0 209 29.2
RcHm_v2.0_Chr7g0237511 Rosa chinensis HOM05D001755 ORTHO05D001665 4.5e-06 57.0 214 24.8
TWI56G0398 Tripterygium wilfordii HOM05D001755 ORTHO05D001665 4.5e-06 57.0 213 27.7
Glyma.08G084100 Glycine max HOM05D004468 ORTHO05D008180 5.9e-06 56.6 47 44.7
Gohir.D05G267500 Gossypium hirsutum HOM05D001755 ORTHO05D001665 5.9e-06 56.6 214 28.0
TPR.G4895 Trifolium pratense HOM05D004468 ORTHO05D008180 5.9e-06 56.6 359 23.1
TAR381G1650 Trochodendron aralioides HOM05D001755 ORTHO05D001665 5.9e-06 56.6 213 28.2
Hma1.2p1_0010F.1_g007010 Hydrangea macrophylla HOM05D001755 ORTHO05D001665 7.8e-06 56.2 213 26.3
Oeu049222.1 Olea europaea HOM05D001755 ORTHO05D001665 7.8e-06 56.2 215 26.0
PSO675G6469 Papaver somniferum HOM05D001755 ORTHO05D001665 7.8e-06 56.2 213 26.8
QL09p017152 Quercus lobata HOM05D001755 ORTHO05D001665 7.8e-06 56.2 217 26.7


User provided reference genes

Program Settings