Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08575 Sequoiadendron giganteum HOM05D005758 ORTHO05D007218 2.0e-118 429.1 215 100.0
MBI07_g30496_MAGBIO Magnolia biondii HOM05D005758 ORTHO05D007218 1.3e-61 240.4 196 61.2
Nn3g19650 Nelumbo nucifera HOM05D005758 ORTHO05D007218 5.6e-60 235.0 194 60.8
vmacro02660 Vaccinium macrocarpon HOM05D005758 ORTHO05D007218 1.2e-59 233.8 200 58.5
TAR636G1025 Trochodendron aralioides HOM05D005758 ORTHO05D007218 2.1e-59 233.0 196 58.2
Aqoxy2G03640 Aquilegia oxysepala HOM05D005758 ORTHO05D007218 3.6e-59 232.3 195 57.9
MBI10_g29590_MAGBIO Magnolia biondii HOM05D005758 ORTHO05D007218 8.0e-59 231.1 196 57.1
Manes.12G032100 Manihot esculenta HOM05D005758 ORTHO05D007218 5.2e-58 228.4 196 59.2
Prupe.8G224000 Prunus persica HOM05D005758 ORTHO05D007218 6.8e-58 228.0 205 55.6
CSS0001414 Camellia sinensis var. sinensis HOM05D005758 ORTHO05D007218 8.9e-58 227.6 198 58.1
ATR0736G118 Amborella trichopoda HOM05D005758 ORTHO05D007218 2.0e-57 226.5 196 56.1
QL09p038696 Quercus lobata HOM05D005758 ORTHO05D007218 2.0e-57 226.5 195 57.9
Rhsim13G0034500 Rhododendron simsii HOM05D005758 ORTHO05D007218 2.6e-57 226.1 200 56.5
COL.COLO4_05896 Corchorus olitorius HOM05D005758 ORTHO05D007218 3.4e-57 225.7 196 59.2
Atru.chr5.1673 Acer truncatum HOM05D005758 ORTHO05D007218 5.7e-57 224.9 200 57.0
Solyc05g026140.4 Solanum lycopersicum HOM05D005758 ORTHO05D007218 5.7e-57 224.9 196 57.1
EL10Ac5g10402 Beta vulgaris HOM05D005758 ORTHO05D007218 7.5e-57 224.6 196 58.7
FAN15G0777 Fragaria x ananassa HOM05D005758 ORTHO05D007218 7.5e-57 224.6 196 58.2
Ciclev10023734m.g Citrus clementina HOM05D005758 ORTHO05D007218 9.8e-57 224.2 196 57.7
Lj1A66G58 Lonicera japonica HOM05D005758 ORTHO05D007218 9.8e-57 224.2 196 59.2
Peaxi162Scf00854g00219 Petunia axillaris HOM05D005758 ORTHO05D007218 1.3e-56 223.8 195 57.4
QL09p049090 Quercus lobata HOM05D005758 ORTHO05D007218 1.3e-56 223.8 195 56.9
TWI12G1280 Tripterygium wilfordii HOM05D005758 ORTHO05D007218 2.2e-56 223.0 197 57.9
arahy.Tifrunner.gnm1.ann1.6W8MXB Arachis hypogaea HOM05D005758 ORTHO05D007218 2.9e-56 222.6 196 60.2
Duzib133G0949 Durio zibethinus HOM05D005758 ORTHO05D007218 2.9e-56 222.6 206 56.3
PSO017G5675 Papaver somniferum HOM05D005758 ORTHO05D007218 2.9e-56 222.6 201 57.7
GSVIVG01028326001 Vitis vinifera HOM05D005758 ORTHO05D007218 2.9e-56 222.6 196 56.6
Potri.005G224000 Populus trichocarpa HOM05D005758 ORTHO05D007218 4.9e-56 221.9 196 57.7
FvH4_2g21510 Fragaria vesca HOM05D005758 ORTHO05D007218 6.4e-56 221.5 196 57.1
FAN24G1897 Fragaria x ananassa HOM05D005758 ORTHO05D007218 6.4e-56 221.5 196 57.1
CAN.G184.8 Capsicum annuum HOM05D005758 ORTHO05D007218 8.3e-56 221.1 196 57.1
FAN27G1683 Fragaria x ananassa HOM05D005758 ORTHO05D007218 8.3e-56 221.1 196 56.6
MD05G1197700 Malus domestica HOM05D005758 ORTHO05D007218 8.3e-56 221.1 200 55.5
RcHm_v2.0_Chr6g0288161 Rosa chinensis HOM05D005758 ORTHO05D007218 8.3e-56 221.1 196 57.7
Sopen05g022350 Solanum pennellii HOM05D005758 ORTHO05D007218 8.3e-56 221.1 196 56.1
Cc04_g14920 Coffea canephora HOM05D005758 ORTHO05D007218 1.1e-55 220.7 200 57.0
Medtr7g096920 Medicago truncatula HOM05D005758 ORTHO05D007218 1.4e-55 220.3 196 57.1
Nitab4.5_0001587g0020 Nicotiana tabacum HOM05D005758 ORTHO05D007218 1.8e-55 219.9 198 55.6
Gorai.001G253600 Gossypium raimondii HOM05D005758 ORTHO05D007218 2.4e-55 219.5 196 55.1
PSO063G6478 Papaver somniferum HOM05D005758 ORTHO05D007218 2.4e-55 219.5 199 57.3
Psat3g057680 Pisum sativum HOM05D005758 ORTHO05D007218 3.2e-55 219.2 196 57.1
Thecc.01G258700 Theobroma cacao HOM05D005758 ORTHO05D007218 5.4e-55 218.4 212 55.2
Cfa002421 Carpinus fangiana HOM05D005758 ORTHO05D007218 7.0e-55 218.0 196 55.6
Gohir.D07G219100 Gossypium hirsutum HOM05D005758 ORTHO05D007218 7.0e-55 218.0 196 55.1
Sabra05G0172800 Salix brachista HOM05D005758 ORTHO05D007218 7.0e-55 218.0 196 56.6
Actinidia27691 Actinidia chinensis HOM05D005758 ORTHO05D007218 9.2e-55 217.6 200 55.5
Glyma.19G164500 Glycine max HOM05D005758 ORTHO05D007218 1.2e-54 217.2 196 56.6
Glyma.03G163000 Glycine max HOM05D005758 ORTHO05D007218 1.6e-54 216.9 196 57.1
CDE03G0270 Ceratophyllum demersum HOM05D005758 ORTHO05D007218 2.0e-54 216.5 198 56.1
AUR62024718 Chenopodium quinoa HOM05D005758 ORTHO05D007218 2.0e-54 216.5 193 56.0
Lalb_Chr02g0152411 Lupinus albus HOM05D005758 ORTHO05D007218 2.0e-54 216.5 194 55.7
Haze_24627 Corylus avellana HOM05D005758 ORTHO05D007218 2.7e-54 216.1 196 54.6
Glyma.13G123400 Glycine max HOM05D005758 ORTHO05D007218 2.7e-54 216.1 194 56.2
MD10G1184300 Malus domestica HOM05D005758 ORTHO05D007218 2.7e-54 216.1 195 56.4
Ah.11g049730 Amaranthus hybridus HOM05D005758 ORTHO05D007218 3.5e-54 215.7 193 56.0
CANSAT35G0929 Cannabis sativa HOM05D005758 ORTHO05D007218 3.5e-54 215.7 198 55.1
Lj1g0005369 Lotus japonicus HOM05D005758 ORTHO05D007218 3.5e-54 215.7 196 56.6
TPR.G28632 Trifolium pratense HOM05D005758 ORTHO05D007218 3.5e-54 215.7 196 55.1
DCAR_012547 Daucus carota HOM05D005758 ORTHO05D007218 4.6e-54 215.3 196 56.6
Mapoly0015s0205 Marchantia polymorpha HOM05D005758 ORTHO05D007218 4.6e-54 215.3 203 52.7
Hund09599 Selenicereus undatus HOM05D005758 ORTHO05D007218 4.6e-54 215.3 194 56.2
Gohir.A07G213000 Gossypium hirsutum HOM05D005758 ORTHO05D007218 5.9e-54 214.9 196 54.6
MSTRG.21495 Avicennia marina HOM05D005758 ORTHO05D007218 1.0e-53 214.2 194 55.7
Migut.D00424 Erythranthe guttata HOM05D005758 ORTHO05D007218 1.0e-53 214.2 198 54.0
HanXRQChr04g0112661 Helianthus annuus HOM05D005758 ORTHO05D007218 1.0e-53 214.2 196 56.6
Os04g0517300 Oryza sativa ssp. japonica HOM05D005758 ORTHO05D007218 1.0e-53 214.2 199 54.3
ClCG09G007800 Citrullus lanatus HOM05D005758 ORTHO05D007218 1.3e-53 213.8 196 55.6
Duzib138G0621 Durio zibethinus HOM05D005758 ORTHO05D007218 1.3e-53 213.8 196 55.6
Phvul.001G160800 Phaseolus vulgaris HOM05D005758 ORTHO05D007218 1.3e-53 213.8 194 56.2
Phvul.007G193000 Phaseolus vulgaris HOM05D005758 ORTHO05D007218 1.3e-53 213.8 194 56.2
VMungo1383G3618 Vigna mungo HOM05D005758 ORTHO05D007218 1.3e-53 213.8 194 55.7
VMungo0720G1063 Vigna mungo HOM05D005758 ORTHO05D007218 1.7e-53 213.4 194 56.2
Ca_08672_v3 Cicer arietinum L. HOM05D005758 ORTHO05D007218 3.0e-53 212.6 196 56.1
Lj5g0021558 Lotus japonicus HOM05D005758 ORTHO05D007218 3.0e-53 212.6 194 55.2
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 8.6e-53 211.1 198 54.5
Carub.0004s1247 Capsella rubella HOM05D005758 ORTHO05D007218 1.1e-52 210.7 198 52.0
MELO3C015730.2 Cucumis melo HOM05D005758 ORTHO05D007218 1.1e-52 210.7 196 54.1
ECA236G3842 Erigeron canadensis HOM05D005758 ORTHO05D007218 2.5e-52 209.5 196 55.6
ECA248G1569 Erigeron canadensis HOM05D005758 ORTHO05D007218 2.5e-52 209.5 196 53.1
Sed0010920 Sechium edule HOM05D005758 ORTHO05D007218 3.3e-52 209.1 196 55.1
HPP92_026239 Vanilla planifolia HOM05D005758 ORTHO05D007218 3.3e-52 209.1 196 53.6
SalBow4G2933 Salvia bowleyana HOM05D005758 ORTHO05D007218 4.3e-52 208.8 200 53.5
SGA_v2.0_scaffold1G00616 Striga asiatica HOM05D005758 ORTHO05D007218 5.6e-52 208.4 198 53.0
CsaV3_7G027330 Cucumis sativus L. HOM05D005758 ORTHO05D007218 9.5e-52 207.6 196 53.1
BcaB06g28429 Brassica carinata HOM05D005758 ORTHO05D007218 1.2e-51 207.2 198 50.5
Zm00001eb077710 Zea mays HOM05D005758 ORTHO05D007218 2.1e-51 206.5 199 52.8
Eucgr.B01556 Eucalyptus grandis HOM05D005758 ORTHO05D007218 3.6e-51 205.7 196 53.1
BraA04t17923Z Brassica rapa HOM05D005758 ORTHO05D007218 4.7e-51 205.3 198 51.5
Lsat_1_v5_gn_5_183400 Lactuca sativa HOM05D005758 ORTHO05D007218 4.7e-51 205.3 196 52.0
BcaB06g28512 Brassica carinata HOM05D005758 ORTHO05D007218 6.2e-51 204.9 198 50.0
PGR004G1596 Punica granatum HOM05D005758 ORTHO05D007218 6.2e-51 204.9 196 53.1
A04p24020 Brassica napus HOM05D005758 ORTHO05D007218 8.0e-51 204.5 198 51.0
Aa31LG5G5730 Aethionema arabicum HOM05D005758 ORTHO05D007218 1.0e-50 204.1 197 50.3
AT2G31190 Arabidopsis thaliana HOM05D005758 ORTHO05D007218 1.4e-50 203.8 198 49.5
C04p60690 Brassica napus HOM05D005758 ORTHO05D007218 2.3e-50 203.0 198 49.5
BolC4t27558H Brassica oleracea HOM05D005758 ORTHO05D007218 2.3e-50 203.0 198 49.5
Cpa.g.sc50.20 Carica papaya HOM05D005758 ORTHO05D007218 2.3e-50 203.0 211 52.6
CARHR124790 Cardamine hirsuta HOM05D005758 ORTHO05D007218 3.1e-50 202.6 198 49.0
Sp4g13680 Schrenkiella parvula HOM05D005758 ORTHO05D007218 4.0e-50 202.2 198 50.0
Thhalv10016683m.g Eutrema salsugineum HOM05D005758 ORTHO05D007218 5.2e-50 201.8 199 50.8
Pp3c16_18490 Physcomitrium patens HOM05D005758 ORTHO05D007218 5.2e-50 201.8 202 51.0
HanXRQChr09g0254391 Helianthus annuus HOM05D005758 ORTHO05D007218 8.9e-50 201.1 196 52.0
Sc24g0003150 Simmondsia chinensis HOM05D005758 ORTHO05D007218 8.9e-50 201.1 187 54.5
Lsat_1_v5_gn_5_183361 Lactuca sativa HOM05D005758 ORTHO05D007218 7.5e-49 198.0 191 51.8
THA.LOC104800871 Tarenaya hassleriana HOM05D005758 ORTHO05D007218 2.2e-48 196.4 198 50.5
Nitab4.5_0000206g0090 Nicotiana tabacum HOM05D005758 ORTHO05D007218 1.4e-47 193.7 193 52.3
Lsat_1_v5_gn_8_93000 Lactuca sativa HOM05D005758 ORTHO05D007218 1.2e-46 190.7 194 50.5
SHI09784 Sapria himalayana HOM05D000105 ORTHO05D007218 1.2e-46 190.7 203 50.2
unitig_8.g3733 Utricularia gibba HOM05D005758 ORTHO05D007218 5.6e-44 181.8 194 49.0
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 8.1e-43 177.9 176 52.3
TAR365G0290 Trochodendron aralioides HOM05D005758 ORTHO05D007218 6.8e-42 174.9 163 55.8
arahy.Tifrunner.gnm1.ann1.N9I7Q3 Arachis hypogaea HOM05D005758 ORTHO05D007218 8.9e-42 174.5 196 53.6
SMO364G0160 Selaginella moellendorffii HOM05D005758 ORTHO05D007218 8.9e-42 174.5 197 45.7
CiPaw.13G172300 Carya illinoinensis HOM05D005758 ORTHO05D007218 1.7e-40 170.2 136 61.8
CBR_g49568 Chara braunii HOM05D005758 ORTHO05D007218 1.2e-27 127.5 295 29.2
Dinv34622 Davidia involucrata HOM05D005758 ORTHO05D007218 2.4e-23 113.2 80 66.2
Lj2A1152G41 Lonicera japonica HOM05D005758 ORTHO05D007218 2.5e-20 103.2 177 39.0
Actinidia37512 Actinidia chinensis HOM05D005758 ORTHO05D007218 9.0e-18 94.7 143 42.0
AL4G26390 Arabidopsis lyrata HOM05D005758 ORTHO05D007218 3.5e-14 82.8 65 52.3
Potri.002G038600 Populus trichocarpa HOM05D005758 ORTHO05D007218 2.6e-09 66.6 46 69.6
Mapoly0141s0001 Marchantia polymorpha HOM05D002321 ORTHO05D007292 9.9e-09 64.7 199 24.6
Lsat_1_v5_gn_1_81301 Lactuca sativa HOM05D005758 ORTHO05D007218 1.3e-08 64.3 42 66.7
SMO118G0437 Selaginella moellendorffii HOM05D002321 ORTHO05D007292 1.4e-07 60.8 198 22.7
CBR_g29960 Chara braunii HOM05D005568 ORTHO05D006940 9.3e-07 58.2 193 24.9
Lsat_1_v5_gn_0_1921 Lactuca sativa HOM05D005758 ORTHO05D007218 4.6e-06 55.8 40 60.0


User provided reference genes

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