Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08574 Sequoiadendron giganteum HOM05D001755 ORTHO05D001665 4.3e-281 970.7 497 100.0
SEGI_08629 Sequoiadendron giganteum HOM05D001755 ORTHO05D001665 2.4e-37 161.0 495 31.5
Mapoly0048s0099 Marchantia polymorpha HOM05D000850 ORTHO05D000266 6.2e-14 83.2 354 28.0
ATR0022G065 Amborella trichopoda HOM05D001755 ORTHO05D001665 4.5e-12 77.0 349 27.5
SMO230G0062 Selaginella moellendorffii HOM05D001755 ORTHO05D001665 5.8e-12 76.6 335 23.3
AUR62027851 Chenopodium quinoa HOM05D001755 ORTHO05D001665 2.9e-11 74.3 215 28.4
AUR62019010 Chenopodium quinoa HOM05D001755 ORTHO05D001665 1.9e-10 71.6 216 28.7
TAR381G1650 Trochodendron aralioides HOM05D001755 ORTHO05D001665 2.5e-10 71.2 219 34.2
PSO675G6469 Papaver somniferum HOM05D001755 ORTHO05D001665 3.2e-10 70.9 226 29.2
PSO541G2838 Papaver somniferum HOM05D001755 ORTHO05D001665 4.2e-10 70.5 226 29.2
COL.COLO4_35196 Corchorus olitorius HOM05D001755 ORTHO05D001665 1.2e-09 68.9 215 33.5
MBI02_g18287_MAGBIO Magnolia biondii HOM05D001755 ORTHO05D001665 1.6e-09 68.6 220 31.8
Sopen04g029980 Solanum pennellii HOM05D001755 ORTHO05D001665 2.1e-09 68.2 360 25.3
MD08G1192900 Malus domestica HOM05D001755 ORTHO05D001665 2.7e-09 67.8 217 32.3
EL10Ac1g01104 Beta vulgaris HOM05D001755 ORTHO05D001665 7.9e-09 66.2 221 31.7
Prupe.1G527600 Prunus persica HOM05D001755 ORTHO05D001665 1.0e-08 65.9 217 31.8
PGSC0003DMG400012901 Solanum tuberosum HOM05D001755 ORTHO05D001665 1.0e-08 65.9 359 26.5
Peaxi162Scf00160g01119 Petunia axillaris HOM05D001755 ORTHO05D001665 1.3e-08 65.5 218 31.2
Thecc.08G067700 Theobroma cacao HOM05D001755 ORTHO05D001665 2.3e-08 64.7 217 32.7
MBI06_g42716_MAGBIO Magnolia biondii HOM05D001755 ORTHO05D001665 3.9e-08 63.9 215 32.6
MD15G1381700 Malus domestica HOM05D001755 ORTHO05D001665 3.9e-08 63.9 215 32.1
Potri.005G158100 Populus trichocarpa HOM05D001755 ORTHO05D001665 3.9e-08 63.9 215 30.2
PGR042G0850 Punica granatum HOM05D001755 ORTHO05D001665 3.9e-08 63.9 217 30.4
TWI56G0398 Tripterygium wilfordii HOM05D001755 ORTHO05D001665 3.9e-08 63.9 246 29.7
Actinidia10367 Actinidia chinensis HOM05D001755 ORTHO05D001665 5.1e-08 63.5 220 30.9
Ciclev10003472m.g Citrus clementina HOM05D001755 ORTHO05D001665 5.1e-08 63.5 222 31.1
Cc10_g15590 Coffea canephora HOM05D001755 ORTHO05D001665 6.7e-08 63.2 222 29.7
Hund16874 Selenicereus undatus HOM05D001755 ORTHO05D001665 6.7e-08 63.2 221 31.2
Manes.18G061300 Manihot esculenta HOM05D001755 ORTHO05D001665 8.7e-08 62.8 218 31.2
Hma1.2p1_0125F.1_g059100 Hydrangea macrophylla HOM05D001755 ORTHO05D001665 1.1e-07 62.4 218 29.4
Sabra02G0081000 Salix brachista HOM05D001755 ORTHO05D001665 1.1e-07 62.4 351 25.9
Aqoxy5G01330 Aquilegia oxysepala HOM05D001755 ORTHO05D001665 1.5e-07 62.0 235 29.8
Duzib041G0605 Durio zibethinus HOM05D001755 ORTHO05D001665 1.5e-07 62.0 218 32.6
Haze_22345 Corylus avellana HOM05D001755 ORTHO05D001665 2.5e-07 61.2 209 29.7
CsaV3_2G030090 Cucumis sativus L. HOM05D001755 ORTHO05D001665 3.3e-07 60.8 223 31.8
HPP92_004086 Vanilla planifolia HOM05D001755 ORTHO05D001665 3.3e-07 60.8 239 24.7
HPP92_004103 Vanilla planifolia HOM05D001755 ORTHO05D001665 3.3e-07 60.8 239 24.7
Solyc04g076030.3 Solanum lycopersicum HOM05D001755 ORTHO05D001665 4.3e-07 60.5 218 28.9
Duzib093G0625 Durio zibethinus HOM05D001755 ORTHO05D001665 5.7e-07 60.1 220 30.9
Duzib116G0593 Durio zibethinus HOM05D001755 ORTHO05D001665 5.7e-07 60.1 217 29.0
QL09p017152 Quercus lobata HOM05D001755 ORTHO05D001665 5.7e-07 60.1 223 30.9
TAR376G0504 Trochodendron aralioides HOM05D001755 ORTHO05D001665 7.4e-07 59.7 221 33.0
CAN.G991.1 Capsicum annuum HOM05D001755 ORTHO05D001665 9.7e-07 59.3 219 29.7
Peaxi162Scf00281g00710 Petunia axillaris HOM05D001755 ORTHO05D001665 9.7e-07 59.3 391 23.3
Sed0006645 Sechium edule HOM05D001755 ORTHO05D001665 9.7e-07 59.3 222 30.2
Atru.chr13.1048 Acer truncatum HOM05D001755 ORTHO05D001665 1.6e-06 58.5 47 59.6
RcHm_v2.0_Chr7g0237511 Rosa chinensis HOM05D001755 ORTHO05D001665 1.6e-06 58.5 215 29.3
Ah.05g170640 Amaranthus hybridus HOM05D001755 ORTHO05D001665 2.2e-06 58.2 216 29.6
FAN13G1646 Fragaria x ananassa HOM05D001755 ORTHO05D001665 2.2e-06 58.2 216 30.6
TAR628G0401 Trochodendron aralioides HOM05D001755 ORTHO05D001665 2.2e-06 58.2 220 30.9
MELO3C011067.2 Cucumis melo HOM05D001755 ORTHO05D001665 2.8e-06 57.8 222 28.4
DCAR_012866 Daucus carota HOM05D001755 ORTHO05D001665 2.8e-06 57.8 393 25.2
FvH4_5g35810 Fragaria vesca HOM05D001755 ORTHO05D001665 2.8e-06 57.8 216 29.6
Solyc12g087890.3 Solanum lycopersicum HOM05D001755 ORTHO05D001665 2.8e-06 57.8 211 29.9
PGSC0003DMG400002044 Solanum tuberosum HOM05D001755 ORTHO05D001665 2.8e-06 57.8 217 30.4
FAN04G1269 Fragaria x ananassa HOM05D001755 ORTHO05D001665 3.7e-06 57.4 216 29.6
Sc01g0001030 Simmondsia chinensis HOM05D001755 ORTHO05D001665 3.7e-06 57.4 217 29.0
CiPaw.07G168200 Carya illinoinensis HOM05D001755 ORTHO05D001665 4.8e-06 57.0 222 30.6
CiPaw.08G054100 Carya illinoinensis HOM05D001755 ORTHO05D001665 4.8e-06 57.0 213 28.2
Sopen12g029930 Solanum pennellii HOM05D001755 ORTHO05D001665 6.3e-06 56.6 217 29.5
MSTRG.26763 Avicennia marina HOM05D001755 ORTHO05D001665 8.2e-06 56.2 214 26.6
ECA247G1217 Erigeron canadensis HOM05D001755 ORTHO05D001665 8.2e-06 56.2 224 28.1
Sc23g0000580 Simmondsia chinensis HOM05D001755 ORTHO05D001665 8.2e-06 56.2 251 26.7


User provided reference genes

Program Settings