Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 3.3e-110 401.7 208 100.0
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 1.4e-52 210.3 153 69.3
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 7.0e-52 208.0 152 69.1
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 1.6e-51 206.8 152 65.8
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 1.6e-51 206.8 152 69.7
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 1.6e-51 206.8 152 69.7
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 2.0e-51 206.5 152 69.1
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 2.7e-51 206.1 152 67.8
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 3.5e-51 205.7 153 66.7
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 4.6e-51 205.3 149 67.8
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 6.0e-51 204.9 151 68.2
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 7.8e-51 204.5 153 68.6
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 7.8e-51 204.5 147 70.7
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 1.0e-50 204.1 171 63.2
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 1.0e-50 204.1 149 68.5
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 1.7e-50 203.4 152 65.1
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 1.7e-50 203.4 152 68.4
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 1.7e-50 203.4 152 69.1
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.7e-50 203.4 152 65.1
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 1.7e-50 203.4 153 66.7
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 2.3e-50 203.0 152 64.5
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 3.0e-50 202.6 152 65.8
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 3.0e-50 202.6 168 58.9
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 3.0e-50 202.6 149 67.8
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 8.6e-50 201.1 152 66.4
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 8.6e-50 201.1 171 58.5
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 1.1e-49 200.7 152 65.8
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 1.5e-49 200.3 153 65.4
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 1.5e-49 200.3 152 65.1
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 4.3e-49 198.7 152 64.5
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 4.3e-49 198.7 152 65.8
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 4.3e-49 198.7 152 63.2
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 4.3e-49 198.7 152 63.2
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 5.6e-49 198.4 153 66.0
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 5.6e-49 198.4 152 65.1
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 7.3e-49 198.0 152 63.8
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 9.5e-49 197.6 152 67.1
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 9.5e-49 197.6 160 63.1
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 1.2e-48 197.2 168 59.5
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 1.6e-48 196.8 152 65.8
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 1.6e-48 196.8 153 64.1
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 1.6e-48 196.8 151 65.6
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 2.1e-48 196.4 149 65.1
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 2.1e-48 196.4 153 64.1
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 2.1e-48 196.4 152 65.1
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 2.8e-48 196.1 151 60.9
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 2.8e-48 196.1 152 64.5
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 2.8e-48 196.1 160 63.1
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 3.6e-48 195.7 151 60.9
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 3.6e-48 195.7 152 62.5
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 3.6e-48 195.7 152 65.1
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 4.7e-48 195.3 154 61.7
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 6.2e-48 194.9 153 66.7
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 8.0e-48 194.5 171 57.3
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 8.0e-48 194.5 172 59.3
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 1.1e-47 194.1 149 63.1
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 1.4e-47 193.7 149 63.8
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 1.4e-47 193.7 157 64.3
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 1.4e-47 193.7 152 64.5
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 1.4e-47 193.7 171 57.9
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 2.3e-47 193.0 151 64.9
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 3.1e-47 192.6 151 64.2
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 3.1e-47 192.6 153 64.1
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 4.0e-47 192.2 159 62.3
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 4.0e-47 192.2 152 63.8
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 6.8e-47 191.4 149 63.1
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 6.8e-47 191.4 152 62.5
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 6.8e-47 191.4 152 60.5
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.2e-46 190.7 160 63.1
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.5e-46 190.3 152 62.5
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 1.5e-46 190.3 156 60.3
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 1.5e-46 190.3 153 61.4
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 2.0e-46 189.9 153 59.5
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 2.0e-46 189.9 153 62.1
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 2.6e-46 189.5 152 61.2
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 2.6e-46 189.5 152 60.5
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 4.4e-46 188.7 152 63.8
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 1.3e-45 187.2 149 61.1
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 1.3e-45 187.2 171 55.6
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 1.7e-45 186.8 152 61.8
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 1.7e-45 186.8 152 63.2
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 2.9e-45 186.0 151 61.6
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 2.9e-45 186.0 154 63.6
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 3.7e-45 185.7 152 59.9
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 3.7e-45 185.7 149 59.1
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 3.7e-45 185.7 153 64.1
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 4.9e-45 185.3 152 61.8
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 8.3e-45 184.5 152 59.2
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 8.3e-45 184.5 152 61.2
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 1.4e-44 183.7 153 60.1
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 1.4e-44 183.7 153 60.1
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 1.4e-44 183.7 153 63.4
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 1.9e-44 183.3 152 61.2
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.9e-44 183.3 152 59.9
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 2.4e-44 183.0 152 61.8
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 2.4e-44 183.0 150 60.7
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 2.4e-44 183.0 150 60.7
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 5.4e-44 181.8 152 60.5
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 5.4e-44 181.8 152 63.2
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 7.0e-44 181.4 152 58.6
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 7.0e-44 181.4 228 47.4
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 2.7e-43 179.5 199 51.8
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 4.3e-41 172.2 149 59.1
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 4.3e-41 172.2 152 58.6
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 4.3e-41 172.2 136 63.2
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 3.6e-40 169.1 114 73.7
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 6.2e-40 168.3 152 56.6
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 1.5e-38 163.7 125 64.8
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 3.0e-26 122.9 149 48.3
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 2.5e-25 119.8 154 42.2
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 7.3e-25 118.2 156 43.6
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 9.6e-25 117.9 99 58.6
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 3.6e-24 115.9 100 58.0
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 7.8e-19 98.2 78 61.5
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 2.4e-15 86.7 68 64.7
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.5e-11 72.8 63 55.6
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.5e-11 72.8 66 54.5
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 4.6e-11 72.4 63 57.1
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 4.6e-11 72.4 63 55.6
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.8e-07 60.5 63 50.8
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 3.1e-07 59.7 54 51.9


User provided reference genes

Program Settings