Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08498 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 2.1e-140 502.3 240 100.0
ATR0796G133 Amborella trichopoda HOM05D006855 ORTHO05D008695 2.8e-60 236.1 180 61.7
Nn3g16630 Nelumbo nucifera HOM05D006855 ORTHO05D008695 1.4e-59 233.8 174 62.1
TAR629G1507 Trochodendron aralioides HOM05D006855 ORTHO05D008695 1.2e-58 230.7 181 58.0
Aqoxy3G00656 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 2.6e-58 229.6 181 59.7
Aqoxy3G01366 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 2.6e-58 229.6 181 59.7
PSO478G2928 Papaver somniferum HOM05D006855 ORTHO05D008695 8.4e-57 224.6 191 58.1
MD13G1105700 Malus domestica HOM05D006855 ORTHO05D008695 1.9e-56 223.4 174 61.5
Lsat_1_v5_gn_8_153661 Lactuca sativa HOM05D006855 ORTHO05D008695 2.7e-55 219.5 173 60.7
GSVIVG01000584001 Vitis vinifera HOM05D006855 ORTHO05D008695 4.6e-55 218.8 182 58.8
Eucgr.H02451 Eucalyptus grandis HOM05D006855 ORTHO05D008695 7.8e-55 218.0 178 56.7
MELO3C011916.2 Cucumis melo HOM05D006855 ORTHO05D008695 1.0e-54 217.6 174 58.6
ClCG05G026110 Citrullus lanatus HOM05D006855 ORTHO05D008695 1.7e-54 216.9 175 57.7
PSO210G7557 Papaver somniferum HOM05D006855 ORTHO05D008695 1.7e-54 216.9 191 56.0
CSS0027349 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 2.3e-54 216.5 188 53.2
CiPaw.05G176800 Carya illinoinensis HOM05D006855 ORTHO05D008695 2.3e-54 216.5 182 57.7
HanXRQChr12g0371791 Helianthus annuus HOM05D006855 ORTHO05D008695 2.3e-54 216.5 174 60.3
CSS0002421 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 5.1e-54 215.3 181 54.1
CAN.G379.20 Capsicum annuum HOM05D006855 ORTHO05D008695 5.1e-54 215.3 184 54.3
PGSC0003DMG400022710 Solanum tuberosum HOM05D006855 ORTHO05D008695 5.1e-54 215.3 183 56.3
Nitab4.5_0015117g0010 Nicotiana tabacum HOM05D006855 ORTHO05D008695 6.6e-54 214.9 178 57.9
Prupe.1G240700 Prunus persica HOM05D006855 ORTHO05D008695 1.5e-53 213.8 176 58.0
Sopen01g004390 Solanum pennellii HOM05D006855 ORTHO05D008695 1.9e-53 213.4 181 56.9
CsaV3_5G030740 Cucumis sativus L. HOM05D006855 ORTHO05D008695 3.3e-53 212.6 175 58.3
COL.COLO4_23530 Corchorus olitorius HOM05D006855 ORTHO05D008695 4.3e-53 212.2 185 58.4
Duzib248G0606 Durio zibethinus HOM05D006855 ORTHO05D008695 5.6e-53 211.8 185 55.7
FAN17G2133 Fragaria x ananassa HOM05D006855 ORTHO05D008695 5.6e-53 211.8 175 60.0
Actinidia15119 Actinidia chinensis HOM05D006855 ORTHO05D008695 7.3e-53 211.5 186 53.2
Ah.02g130370 Amaranthus hybridus HOM05D006855 ORTHO05D008695 7.3e-53 211.5 184 54.3
TWI75G0344 Tripterygium wilfordii HOM05D006855 ORTHO05D008695 7.3e-53 211.5 174 56.9
Solyc01g008900.4 Solanum lycopersicum HOM05D006855 ORTHO05D008695 1.3e-52 210.7 180 56.1
Atru.chr11.2187 Acer truncatum HOM05D006855 ORTHO05D008695 2.1e-52 209.9 188 54.8
Cpa.g.sc33.79 Carica papaya HOM05D006855 ORTHO05D008695 2.1e-52 209.9 174 56.9
FAN12G0810 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.1e-52 209.9 175 60.0
TPR.G5676 Trifolium pratense HOM05D006855 ORTHO05D008695 2.1e-52 209.9 180 53.9
CANSAT01G1415 Cannabis sativa HOM05D006855 ORTHO05D008695 2.8e-52 209.5 177 56.5
FAN22G2334 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.6e-52 209.1 175 59.4
Medtr3g086360 Medicago truncatula HOM05D006855 ORTHO05D008695 3.6e-52 209.1 209 50.7
RcHm_v2.0_Chr4g0432431 Rosa chinensis HOM05D006855 ORTHO05D008695 4.8e-52 208.8 175 59.4
Dinv14753 Davidia involucrata HOM05D006855 ORTHO05D008695 8.1e-52 208.0 178 57.9
Lalb_Chr11g0075551 Lupinus albus HOM05D006855 ORTHO05D008695 8.1e-52 208.0 174 56.3
Cc11_g16140 Coffea canephora HOM05D006855 ORTHO05D008695 1.8e-51 206.8 182 55.5
PGR083G2447 Punica granatum HOM05D006855 ORTHO05D008695 3.1e-51 206.1 173 54.9
arahy.Tifrunner.gnm1.ann1.FYV5AX Arachis hypogaea HOM05D006855 ORTHO05D008695 5.3e-51 205.3 178 53.4
Ciclev10031545m.g Citrus clementina HOM05D006855 ORTHO05D008695 9.0e-51 204.5 183 55.7
Pp3c22_21870 Physcomitrium patens HOM05D006855 ORTHO05D008695 9.0e-51 204.5 184 57.1
Potri.010G051200 Populus trichocarpa HOM05D006855 ORTHO05D008695 9.0e-51 204.5 187 53.5
AUR62005523 Chenopodium quinoa HOM05D006855 ORTHO05D008695 1.2e-50 204.1 182 52.2
AUR62024216 Chenopodium quinoa HOM05D006855 ORTHO05D008695 1.2e-50 204.1 181 53.0
Peaxi162Scf00050g00819 Petunia axillaris HOM05D006855 ORTHO05D008695 2.6e-50 203.0 176 56.2
Zm00001eb155910 Zea mays HOM05D006855 ORTHO05D008695 2.6e-50 203.0 179 54.7
Glyma.11G244400 Glycine max HOM05D006855 ORTHO05D008695 3.4e-50 202.6 174 55.2
Migut.K00633 Erythranthe guttata HOM05D006855 ORTHO05D008695 4.5e-50 202.2 189 51.9
Gohir.D12G150600 Gossypium hirsutum HOM05D006855 ORTHO05D008695 5.8e-50 201.8 186 53.8
Sp2g15320 Schrenkiella parvula HOM05D006855 ORTHO05D008695 7.6e-50 201.4 173 52.6
CDE02G0600 Ceratophyllum demersum HOM05D006855 ORTHO05D008695 9.9e-50 201.1 185 51.4
Psat5g092640 Pisum sativum HOM05D006855 ORTHO05D008695 9.9e-50 201.1 201 48.8
Gorai.008G162100 Gossypium raimondii HOM05D006855 ORTHO05D008695 1.3e-49 200.7 186 53.2
Thecc.02G266900 Theobroma cacao HOM05D006855 ORTHO05D008695 1.3e-49 200.7 185 55.7
A06p42230 Brassica napus HOM05D006855 ORTHO05D008695 2.2e-49 199.9 178 51.7
BraA06t27139Z Brassica rapa HOM05D006855 ORTHO05D008695 2.2e-49 199.9 178 51.7
Thhalv10004274m.g Eutrema salsugineum HOM05D006855 ORTHO05D008695 2.2e-49 199.9 173 53.2
Mapoly0058s0079 Marchantia polymorpha HOM05D006855 ORTHO05D008695 2.9e-49 199.5 176 56.8
Sed0018660 Sechium edule HOM05D006855 ORTHO05D008695 2.9e-49 199.5 176 55.1
Aa31LG2G6230 Aethionema arabicum HOM05D006855 ORTHO05D008695 3.8e-49 199.1 175 53.7
C07p35130 Brassica napus HOM05D006855 ORTHO05D008695 3.8e-49 199.1 173 53.2
Phvul.001G256400 Phaseolus vulgaris HOM05D006855 ORTHO05D008695 3.8e-49 199.1 174 54.6
Lj6g0028045 Lotus japonicus HOM05D006855 ORTHO05D008695 4.9e-49 198.7 174 54.0
Manes.12G019600 Manihot esculenta HOM05D006855 ORTHO05D008695 4.9e-49 198.7 182 52.2
THA.LOC104825678 Tarenaya hassleriana HOM05D006855 ORTHO05D008695 4.9e-49 198.7 180 51.7
Os01g0695600 Oryza sativa ssp. japonica HOM05D006855 ORTHO05D008695 6.4e-49 198.4 188 52.7
MSTRG.548 Avicennia marina HOM05D006855 ORTHO05D008695 8.4e-49 198.0 180 49.4
Haze_12292 Corylus avellana HOM05D006855 ORTHO05D008695 8.4e-49 198.0 199 52.8
BcaC06g31090 Brassica carinata HOM05D006855 ORTHO05D008695 1.4e-48 197.2 173 54.9
Ca_25129_v3 Cicer arietinum L. HOM05D006855 ORTHO05D008695 1.9e-48 196.8 173 53.8
vmacro16160 Vaccinium macrocarpon HOM05D006855 ORTHO05D008695 1.9e-48 196.8 196 48.5
FAN07G2733 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.4e-48 196.4 169 58.6
BcaC06g33927 Brassica carinata HOM05D006855 ORTHO05D008695 4.2e-48 195.7 173 52.6
BolC7t44041H Brassica oleracea HOM05D006855 ORTHO05D008695 4.2e-48 195.7 173 52.6
Carub.0005s0400 Capsella rubella HOM05D006855 ORTHO05D008695 4.2e-48 195.7 173 52.0
CARHR147120 Cardamine hirsuta HOM05D006855 ORTHO05D008695 1.2e-47 194.1 174 51.7
SGA_v2.0_scaffold100G29585 Striga asiatica HOM05D006855 ORTHO05D008695 3.5e-47 192.6 173 53.8
AL5G14830 Arabidopsis lyrata HOM05D006855 ORTHO05D008695 6.0e-47 191.8 173 52.0
HPP92_023148 Vanilla planifolia HOM05D006855 ORTHO05D008695 5.1e-46 188.7 174 52.3
Lj3A1062T101 Lonicera japonica HOM05D006855 ORTHO05D008695 6.7e-46 188.3 173 54.3
VMungo1383G3215 Vigna mungo HOM05D000933 ORTHO05D000820 2.5e-45 186.4 168 53.6
Gohir.A12G146000 Gossypium hirsutum HOM05D006855 ORTHO05D008695 3.3e-45 186.0 172 51.2
SalBow2G0666 Salvia bowleyana HOM05D006855 ORTHO05D008695 9.6e-45 184.5 196 46.9
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 8.1e-44 181.4 160 56.2
FAN14G3171 Fragaria x ananassa HOM05D006855 ORTHO05D008695 8.4e-41 171.4 137 59.9
FAN18G3688 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.6e-39 167.2 140 57.1
Carub.0005s0511 Capsella rubella HOM05D006855 ORTHO05D008695 2.1e-39 166.8 176 48.3
unitig_699.g19941 Utricularia gibba HOM05D002671 ORTHO05D001380 3.9e-38 162.5 168 50.0
FAN08G3042 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.1e-37 161.0 130 58.5
EL10As2g23185 Beta vulgaris HOM05D006855 ORTHO05D008695 2.5e-37 159.8 181 46.4
QL03p056162 Quercus lobata HOM05D006855 ORTHO05D008695 2.4e-35 153.3 130 55.4
SMO203G0085 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 9.0e-35 151.4 171 46.8
Nitab4.5_0000718g0180 Nicotiana tabacum HOM05D006855 ORTHO05D008695 1.0e-30 137.9 178 42.1
MBI19_g16323_MAGBIO Magnolia biondii HOM05D006855 ORTHO05D008695 7.6e-26 121.7 103 56.3
SMO327G0033 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 7.2e-24 115.2 134 44.8
Cre01.g031850 Chlamydomonas reinhardtii HOM05D006855 ORTHO05D008695 9.3e-24 114.8 204 35.3
FAN15G2953 Fragaria x ananassa HOM05D006855 ORTHO05D008695 4.6e-23 112.5 93 53.8
FAN23G2199 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.3e-22 110.9 93 53.8
SMO203G0059 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 2.5e-21 106.7 149 41.6
arahy.Tifrunner.gnm1.ann1.74BAAJ Arachis hypogaea HOM05D006855 ORTHO05D008695 1.7e-20 104.0 102 47.1
AT3G26115 Arabidopsis thaliana HOM05D006855 ORTHO05D008695 6.9e-19 98.6 103 42.7
CSS0015338 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.2e-18 97.8 106 44.3
CSS0040008 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 7.2e-16 88.6 121 35.5
SEGI_15055 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 4.7e-15 85.9 44 100.0
SMO327G0043 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 1.8e-14 84.0 107 44.9
SMO203G0223 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 2.9e-09 66.6 86 44.2
ECA233G3820 Erigeron canadensis HOM05D006855 ORTHO05D008695 1.6e-07 60.8 44 68.2
SMO364G0181 Selaginella moellendorffii HOM05D005071 ORTHO05D006069 1.6e-07 60.8 149 28.9
Sc11g0000830 Simmondsia chinensis HOM05D006855 ORTHO05D008695 2.1e-07 60.5 43 67.4
QL03p056156 Quercus lobata HOM05D006855 ORTHO05D008695 2.7e-07 60.1 51 56.9
Cc04_g09040 Coffea canephora HOM05D005071 ORTHO05D006069 1.8e-06 57.4 163 28.2
TPR.G1402 Trifolium pratense HOM05D005071 ORTHO05D006069 2.3e-06 57.0 156 28.2
Medtr8g107670 Medicago truncatula HOM05D005071 ORTHO05D006069 3.9e-06 56.2 156 28.2
Os02g0773300 Oryza sativa ssp. japonica HOM05D005071 ORTHO05D006069 3.9e-06 56.2 155 31.6
LjContig00484g0022264 Lotus japonicus HOM05D005071 ORTHO05D006069 5.2e-06 55.8 156 27.6
Hund25410 Selenicereus undatus HOM05D006855 ORTHO05D008695 5.2e-06 55.8 44 56.8
Glyma.05G248600 Glycine max HOM05D005071 ORTHO05D006069 6.7e-06 55.5 156 27.6
Rhsim08G0124200 Rhododendron simsii HOM05D005071 ORTHO05D006069 8.8e-06 55.1 150 27.3


User provided reference genes

Program Settings