Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08495 Sequoiadendron giganteum HOM05D054687 ORTHO05D006354 0.0e+00 1105.1 574 100.0
SEGI_25934 Sequoiadendron giganteum HOM05D054687 ORTHO05D006354 6.0e-186 654.8 361 96.7
SEGI_31043 Sequoiadendron giganteum HOM05D005357 ORTHO05D006354 1.9e-35 154.8 501 32.9
TAR636G3085 Trochodendron aralioides HOM05D005357 ORTHO05D006354 2.5e-35 154.5 396 34.1
PSO585G0030 Papaver somniferum HOM05D005357 ORTHO05D006354 3.7e-34 150.6 366 33.3
PSO384G3148 Papaver somniferum HOM05D005357 ORTHO05D006354 3.1e-33 147.5 426 31.5
MBI06_g17209_MAGBIO Magnolia biondii HOM05D005357 ORTHO05D006354 1.2e-32 145.6 406 35.0
QL07p036221 Quercus lobata HOM05D005357 ORTHO05D006354 6.5e-31 139.8 400 31.5
TAR633G0560 Trochodendron aralioides HOM05D005357 ORTHO05D006354 2.5e-30 137.9 453 31.1
Sp6g40520 Schrenkiella parvula HOM05D005357 ORTHO05D006354 3.2e-30 137.5 92 69.6
CiPaw.09G205000 Carya illinoinensis HOM05D005357 ORTHO05D006354 4.2e-30 137.1 408 31.9
Medtr7g066710 Medicago truncatula HOM05D005357 ORTHO05D006354 7.2e-30 136.3 94 68.1
CARHR211480 Cardamine hirsuta HOM05D005357 ORTHO05D006354 9.4e-30 136.0 92 68.5
CDE03G0086 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 1.2e-29 135.6 103 64.1
GSVIVG01034021001 Vitis vinifera HOM05D005357 ORTHO05D006354 1.2e-29 135.6 91 69.2
Carub.0006s0073 Capsella rubella HOM05D005357 ORTHO05D006354 2.1e-29 134.8 92 66.3
Thhalv10014073m.g Eutrema salsugineum HOM05D005357 ORTHO05D006354 2.1e-29 134.8 92 67.4
AUR62011861 Chenopodium quinoa HOM05D005357 ORTHO05D006354 2.7e-29 134.4 92 67.4
AUR62024704 Chenopodium quinoa HOM05D005357 ORTHO05D006354 2.7e-29 134.4 92 67.4
ClCG10G021740 Citrullus lanatus HOM05D005357 ORTHO05D006354 2.7e-29 134.4 369 32.2
Dinv37091 Davidia involucrata HOM05D005357 ORTHO05D006354 2.7e-29 134.4 394 34.8
Nn1g02852 Nelumbo nucifera HOM05D005357 ORTHO05D006354 2.7e-29 134.4 392 32.7
AT5G01160 Arabidopsis thaliana HOM05D005357 ORTHO05D006354 3.6e-29 134.0 92 66.3
A10p33610 Brassica napus HOM05D005357 ORTHO05D006354 3.6e-29 134.0 92 67.4
C09p74540 Brassica napus HOM05D005357 ORTHO05D006354 3.6e-29 134.0 92 67.4
BolC9t60186H Brassica oleracea HOM05D005357 ORTHO05D006354 3.6e-29 134.0 92 67.4
CANSAT35G1827 Cannabis sativa HOM05D005357 ORTHO05D006354 3.6e-29 134.0 436 30.7
Potri.006G095600 Populus trichocarpa HOM05D005357 ORTHO05D006354 4.7e-29 133.7 466 31.5
THA.LOC104827038 Tarenaya hassleriana HOM05D005357 ORTHO05D006354 4.7e-29 133.7 151 51.0
Zm00001eb221140 Zea mays HOM05D005357 ORTHO05D006354 6.1e-29 133.3 93 68.8
Hund02920 Selenicereus undatus HOM05D005357 ORTHO05D006354 7.9e-29 132.9 92 67.4
AL6G11040 Arabidopsis lyrata HOM05D005357 ORTHO05D006354 1.0e-28 132.5 92 65.2
BraA10t45393Z Brassica rapa HOM05D005357 ORTHO05D006354 1.4e-28 132.1 92 66.3
Cfa017262 Carpinus fangiana HOM05D005357 ORTHO05D006354 1.4e-28 132.1 411 30.4
COL.COLO4_14619 Corchorus olitorius HOM05D005357 ORTHO05D006354 1.4e-28 132.1 449 31.8
Lj3g0024478 Lotus japonicus HOM05D005357 ORTHO05D006354 1.4e-28 132.1 315 33.3
Haze_20938 Corylus avellana HOM05D005357 ORTHO05D006354 1.8e-28 131.7 394 30.7
Actinidia29139 Actinidia chinensis HOM05D005357 ORTHO05D006354 2.3e-28 131.3 423 29.3
Zm00001eb044800 Zea mays HOM05D005357 ORTHO05D006354 2.3e-28 131.3 93 67.7
Os10g0494500 Oryza sativa ssp. japonica HOM05D005357 ORTHO05D006354 3.0e-28 131.0 93 65.6
BcaNung02762 Brassica carinata HOM05D005357 ORTHO05D006354 5.1e-28 130.2 92 64.1
Actinidia13789 Actinidia chinensis HOM05D005357 ORTHO05D006354 6.7e-28 129.8 380 31.1
Glyma.07G144300 Glycine max HOM05D005357 ORTHO05D006354 6.7e-28 129.8 333 33.3
Lsat_1_v5_gn_5_155380 Lactuca sativa HOM05D005357 ORTHO05D006354 6.7e-28 129.8 93 65.6
RcHm_v2.0_Chr3g0463991 Rosa chinensis HOM05D005357 ORTHO05D006354 1.1e-27 129.0 106 63.2
Hund09607 Selenicereus undatus HOM05D005357 ORTHO05D006354 1.5e-27 128.6 92 64.1
Gorai.012G111100 Gossypium raimondii HOM05D005357 ORTHO05D006354 2.0e-27 128.3 94 64.9
MELO3C009198.2 Cucumis melo HOM05D005357 ORTHO05D006354 2.6e-27 127.9 92 63.0
FAN02G3235 Fragaria x ananassa HOM05D005357 ORTHO05D006354 3.3e-27 127.5 106 60.4
Manes.08G086900 Manihot esculenta HOM05D005357 ORTHO05D006354 3.3e-27 127.5 383 31.9
BcaB05g21942 Brassica carinata HOM05D005357 ORTHO05D006354 4.4e-27 127.1 93 64.5
ECA248G2096 Erigeron canadensis HOM05D005357 ORTHO05D006354 4.4e-27 127.1 93 62.4
HanXRQChr13g0406371 Helianthus annuus HOM05D005357 ORTHO05D006354 4.4e-27 127.1 102 59.8
Duzib093G0024 Durio zibethinus HOM05D005357 ORTHO05D006354 5.7e-27 126.7 398 29.9
FAN05G3392 Fragaria x ananassa HOM05D005357 ORTHO05D006354 7.4e-27 126.3 106 59.4
Gohir.A04G087700 Gossypium hirsutum HOM05D005357 ORTHO05D006354 7.4e-27 126.3 94 64.9
Lalb_Chr01g0022881 Lupinus albus HOM05D005357 ORTHO05D006354 7.4e-27 126.3 331 32.9
PGSC0003DMG402020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 9.7e-27 125.9 105 61.0
Aa31LG1G22800 Aethionema arabicum HOM05D005357 ORTHO05D006354 1.3e-26 125.6 153 47.7
TWI77G0073 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 1.3e-26 125.6 440 29.5
Aqoxy1G00739 Aquilegia oxysepala HOM05D005357 ORTHO05D006354 1.7e-26 125.2 399 29.8
Sed0007832 Sechium edule HOM05D005357 ORTHO05D006354 3.7e-26 124.0 383 30.8
Thecc.05G023500 Theobroma cacao HOM05D005357 ORTHO05D006354 3.7e-26 124.0 402 31.8
HPP92_021066 Vanilla planifolia HOM05D005357 ORTHO05D006354 3.7e-26 124.0 370 31.4
SGA_v2.0_scaffold75G24995 Striga asiatica HOM05D005357 ORTHO05D006354 4.8e-26 123.6 92 63.0
vmacro01296 Vaccinium macrocarpon HOM05D005357 ORTHO05D006354 4.8e-26 123.6 107 56.1
CAN.G284.13 Capsicum annuum HOM05D005357 ORTHO05D006354 6.3e-26 123.2 105 59.0
Duzib128G1243 Durio zibethinus HOM05D005357 ORTHO05D006354 6.3e-26 123.2 375 30.7
SalBow3G4061 Salvia bowleyana HOM05D005357 ORTHO05D006354 1.1e-25 122.5 399 32.6
Prupe.6G269500 Prunus persica HOM05D005357 ORTHO05D006354 1.4e-25 122.1 367 31.3
Ah.11g049570 Amaranthus hybridus HOM05D005357 ORTHO05D006354 1.8e-25 121.7 71 77.5
TWI74G0304 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 1.8e-25 121.7 398 29.6
Duzib106G1773 Durio zibethinus HOM05D005357 ORTHO05D006354 2.4e-25 121.3 371 31.3
arahy.Tifrunner.gnm1.ann1.5ZZ6F4 Arachis hypogaea HOM05D005357 ORTHO05D006354 3.1e-25 120.9 111 55.0
Ca_09168_v3 Cicer arietinum L. HOM05D005357 ORTHO05D006354 3.1e-25 120.9 344 31.1
PGR031G1436 Punica granatum HOM05D005357 ORTHO05D006354 3.1e-25 120.9 414 29.7
Sopen09g006960 Solanum pennellii HOM05D005357 ORTHO05D006354 4.1e-25 120.6 93 62.4
Phvul.008G108800 Phaseolus vulgaris HOM05D005357 ORTHO05D006354 5.3e-25 120.2 334 33.5
MD12G1159000 Malus domestica HOM05D005357 ORTHO05D006354 6.9e-25 119.8 444 29.1
TPR.G1557 Trifolium pratense HOM05D005357 ORTHO05D006354 6.9e-25 119.8 335 31.9
arahy.Tifrunner.gnm1.ann1.H8VZ0K Arachis hypogaea HOM05D005357 ORTHO05D006354 1.2e-24 119.0 370 31.6
Dinv03649 Davidia involucrata HOM05D005357 ORTHO05D006354 1.2e-24 119.0 406 29.3
Hma1.2p1_0703F.1_g206335 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 1.2e-24 119.0 425 27.5
Medtr7g056183 Medicago truncatula HOM05D005357 ORTHO05D006354 1.2e-24 119.0 333 33.9
Migut.J00234 Erythranthe guttata HOM05D005357 ORTHO05D006354 1.5e-24 118.6 399 30.6
Gohir.D09G158500 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.5e-24 118.6 432 29.2
Cpa.g.sc312.3 Carica papaya HOM05D005357 ORTHO05D006354 2.0e-24 118.2 388 28.9
Glyma.18G195500 Glycine max HOM05D005357 ORTHO05D006354 2.0e-24 118.2 350 33.1
SEGI_09771 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 2.6e-24 117.9 71 81.7
BcaNung02766 Brassica carinata HOM05D005357 ORTHO05D006354 4.5e-24 117.1 66 77.3
CsaV3_3G034230 Cucumis sativus L. HOM05D005357 ORTHO05D006354 5.9e-24 116.7 335 33.1
Oeu044369.1 Olea europaea HOM05D005357 ORTHO05D006354 5.9e-24 116.7 89 61.8
Lalb_Chr03g0042941 Lupinus albus HOM05D005357 ORTHO05D006354 7.7e-24 116.3 378 36.0
Peaxi162Scf00141g00133 Petunia axillaris HOM05D005357 ORTHO05D006354 7.7e-24 116.3 402 32.3
Ciclev10011563m.g Citrus clementina HOM05D005357 ORTHO05D006354 1.0e-23 115.9 455 30.8
SEGI_23362 Sequoiadendron giganteum HOM05D001900 ORTHO05D003003 1.0e-23 115.9 73 80.8
Gohir.A09G163000 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.3e-23 115.5 437 28.6
EL10As5g23477 Beta vulgaris HOM05D005357 ORTHO05D006354 2.2e-23 114.8 349 31.5
Nitab4.5_0006254g0010 Nicotiana tabacum HOM05D005357 ORTHO05D006354 2.2e-23 114.8 368 32.1
CDE04G3126 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 2.9e-23 114.4 345 30.4
Nitab4.5_0000008g0560 Nicotiana tabacum HOM05D005357 ORTHO05D006354 5.0e-23 113.6 393 32.3
SEGI_09043 Sequoiadendron giganteum HOM05D000167 ORTHO05D384682 6.5e-23 113.2 71 80.3
DCAR_005589 Daucus carota HOM05D005357 ORTHO05D006354 8.5e-23 112.8 106 54.7
SEGI_22531 Sequoiadendron giganteum HOM05D000164 ORTHO05D000096 8.5e-23 112.8 71 80.3
Sc05g0000650 Simmondsia chinensis HOM05D005357 ORTHO05D006354 8.5e-23 112.8 178 41.0
MSTRG.5603 Avicennia marina HOM05D005357 ORTHO05D006354 1.9e-22 111.7 423 29.1
Cc06_g01760 Coffea canephora HOM05D005357 ORTHO05D006354 1.9e-22 111.7 439 28.5
Lj2A78G31 Lonicera japonica HOM05D005357 ORTHO05D006354 1.9e-22 111.7 393 30.0
Gorai.006G180200 Gossypium raimondii HOM05D005357 ORTHO05D006354 3.2e-22 110.9 436 28.7
SEGI_24492 Sequoiadendron giganteum HOM05D013614 ORTHO05D006354 7.2e-22 109.8 71 76.1
SEGI_23092 Sequoiadendron giganteum HOM05D006005 ORTHO05D007167 1.2e-21 109.0 71 77.5
FvH4_6g12190 Fragaria vesca HOM05D005357 ORTHO05D006354 2.1e-21 108.2 342 30.1
FAN09G0023 Fragaria x ananassa HOM05D005357 ORTHO05D006354 2.1e-21 108.2 342 30.1
FAN14G1666 Fragaria x ananassa HOM05D005357 ORTHO05D006354 2.1e-21 108.2 342 30.1
SEGI_38872 Sequoiadendron giganteum HOM05D003403 ORTHO05D003889 2.1e-21 108.2 69 78.3
SEGI_10979 Sequoiadendron giganteum HOM05D008993 ORTHO05D010920 2.7e-21 107.8 64 85.9
FAN14G2781 Fragaria x ananassa HOM05D005357 ORTHO05D006354 6.1e-21 106.7 441 28.8
Psat3g131000 Pisum sativum HOM05D005357 ORTHO05D006354 6.1e-21 106.7 325 31.1
SEGI_15993 Sequoiadendron giganteum HOM05D013614 ORTHO05D006354 6.1e-21 106.7 64 81.2
SEGI_41533 Sequoiadendron giganteum HOM05D000501 ORTHO05D000239 6.1e-21 106.7 71 74.6
SGA_v2.0_scaffold85G26772 Striga asiatica HOM05D005357 ORTHO05D006354 6.1e-21 106.7 332 34.0
Oeu030537.4 Olea europaea HOM05D005357 ORTHO05D006354 1.4e-20 105.5 102 55.9
MD04G1145200 Malus domestica HOM05D005357 ORTHO05D006354 2.3e-20 104.8 383 29.8
HanXRQChr13g0397571 Helianthus annuus HOM05D005357 ORTHO05D006354 3.9e-20 104.0 93 52.7
DCAR_008325 Daucus carota HOM05D005357 ORTHO05D006354 5.2e-20 103.6 83 54.2
HanXRQChr13g0397921 Helianthus annuus HOM05D005357 ORTHO05D006354 1.5e-19 102.1 93 50.5
Gohir.D04G128100 Gossypium hirsutum HOM05D005357 ORTHO05D006354 4.4e-19 100.5 94 55.3
Pp3c20_10060 Physcomitrium patens HOM05D005357 ORTHO05D006354 1.7e-18 98.6 71 59.2
Sabra06G0073400 Salix brachista HOM05D005357 ORTHO05D006354 2.8e-18 97.8 443 29.3
SHI12776 Sapria himalayana HOM05D005357 ORTHO05D006354 1.8e-17 95.1 82 62.2
Mapoly0068s0057 Marchantia polymorpha HOM05D005357 ORTHO05D006354 2.4e-17 94.7 70 54.3
Solyc09g013120.4 Solanum lycopersicum HOM05D005357 ORTHO05D006354 5.5e-14 83.6 71 59.2
Eucgr.B02762 Eucalyptus grandis HOM05D005357 ORTHO05D006354 2.1e-13 81.6 355 28.5
unitig_22.g6590 Utricularia gibba HOM05D005357 ORTHO05D006354 2.7e-13 81.3 45 80.0
Pp3c23_4130 Physcomitrium patens HOM05D005357 ORTHO05D006354 3.6e-13 80.9 248 29.0
ATR0605G041 Amborella trichopoda HOM05D005357 ORTHO05D006354 4.0e-12 77.4 355 28.5
Atru.chr8.2135 Acer truncatum HOM05D005357 ORTHO05D006354 1.2e-11 75.9 430 26.3
Pp3c8_18230 Physcomitrium patens HOM05D005357 ORTHO05D006354 3.3e-11 74.3 100 35.0
CBR_g24154 Chara braunii HOM05D005357 ORTHO05D006354 1.1e-09 69.3 66 45.5
Hma1.2p1_0125F.1_g058510 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 1.4e-09 68.9 57 50.9
CSS0020158 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 7.7e-08 63.2 345 26.1
VMungo1383G1762 Vigna mungo HOM05D005357 ORTHO05D006354 5.5e-06 57.0 295 26.4


User provided reference genes

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