Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08455 Sequoiadendron giganteum HOM05D001958 ORTHO05D001971 1.3e-49 199.5 105 100.0
SEGI_19504 Sequoiadendron giganteum HOM05D001958 ORTHO05D001971 9.7e-34 146.7 105 76.2
SEGI_34842 Sequoiadendron giganteum HOM05D001958 ORTHO05D001971 2.8e-33 145.2 105 75.2
SEGI_09078 Sequoiadendron giganteum HOM05D001958 ORTHO05D001971 2.1e-12 75.9 107 43.9
FAN04G1543 Fragaria x ananassa HOM05D001958 ORTHO05D001971 2.6e-10 68.9 105 41.9
FAN13G1959 Fragaria x ananassa HOM05D001958 ORTHO05D001971 2.6e-10 68.9 105 41.9
RcHm_v2.0_Chr7g0241801 Rosa chinensis HOM05D001958 ORTHO05D001971 7.5e-10 67.4 105 40.0
FvH4_5g39470 Fragaria vesca HOM05D001958 ORTHO05D001971 1.3e-09 66.6 105 41.0
Sp1g01650 Schrenkiella parvula HOM05D001958 ORTHO05D001971 1.3e-09 66.6 102 44.1
Actinidia27609 Actinidia chinensis HOM05D001958 ORTHO05D001971 1.7e-09 66.2 102 44.1
Dinv33104 Davidia involucrata HOM05D001958 ORTHO05D001971 1.7e-09 66.2 102 46.1
FAN08G3390 Fragaria x ananassa HOM05D001958 ORTHO05D001971 2.2e-09 65.9 105 41.0
ATR0320G001 Amborella trichopoda HOM05D001958 ORTHO05D001971 3.7e-09 65.1 101 41.6
FAN18G2454 Fragaria x ananassa HOM05D001958 ORTHO05D001971 4.9e-09 64.7 105 40.0
Hma1.2p1_0212F.1_g090030 Hydrangea macrophylla HOM05D001958 ORTHO05D001971 4.9e-09 64.7 102 47.1
CSS0016868 Camellia sinensis var. sinensis HOM05D001958 ORTHO05D001971 6.3e-09 64.3 102 46.1
Glyma.02G013700 Glycine max HOM05D001958 ORTHO05D001971 6.3e-09 64.3 102 42.2
MD03G1296900 Malus domestica HOM05D001958 ORTHO05D001971 6.3e-09 64.3 105 40.0
Thecc.01G311000 Theobroma cacao HOM05D001958 ORTHO05D001971 6.3e-09 64.3 107 43.0
Migut.D00094 Erythranthe guttata HOM05D001958 ORTHO05D001971 1.1e-08 63.5 111 36.0
Dinv10079 Davidia involucrata HOM05D001958 ORTHO05D001971 1.4e-08 63.2 102 44.1
Lj2A1204T55 Lonicera japonica HOM05D001958 ORTHO05D001971 1.4e-08 63.2 102 42.2
AL1G12000 Arabidopsis lyrata HOM05D001958 ORTHO05D001971 1.8e-08 62.8 50 62.0
Haze_05018 Corylus avellana HOM05D001958 ORTHO05D001971 1.8e-08 62.8 102 41.2
MD11G1316500 Malus domestica HOM05D001958 ORTHO05D001971 1.8e-08 62.8 105 41.0
PSO170G6496 Papaver somniferum HOM05D001958 ORTHO05D001971 1.8e-08 62.8 105 40.0
BcaC07g42400 Brassica carinata HOM05D001958 ORTHO05D001971 2.4e-08 62.4 103 40.8
Carub.0001s0171 Capsella rubella HOM05D001958 ORTHO05D001971 2.4e-08 62.4 102 43.1
Lsat_1_v5_gn_8_165301 Lactuca sativa HOM05D001958 ORTHO05D001971 2.4e-08 62.4 122 36.9
BraA09t42202Z Brassica rapa HOM05D001958 ORTHO05D001971 3.1e-08 62.0 102 43.1
Nn4g25638 Nelumbo nucifera HOM05D001958 ORTHO05D001971 3.1e-08 62.0 104 43.3
AT1G02660 Arabidopsis thaliana HOM05D001958 ORTHO05D001971 4.1e-08 61.6 105 40.0
A09p68590 Brassica napus HOM05D001958 ORTHO05D001971 5.4e-08 61.2 102 42.2
C08p53200 Brassica napus HOM05D001958 ORTHO05D001971 5.4e-08 61.2 63 52.4
BolC8t52835H Brassica oleracea HOM05D001958 ORTHO05D001971 5.4e-08 61.2 63 52.4
Medtr1g087330 Medicago truncatula HOM05D001958 ORTHO05D001971 5.4e-08 61.2 102 43.1
Medtr7g117280 Medicago truncatula HOM05D001958 ORTHO05D001971 5.4e-08 61.2 104 37.5
BraA08t35658Z Brassica rapa HOM05D001958 ORTHO05D001971 7.0e-08 60.8 46 67.4
Psat6g162480 Pisum sativum HOM05D001958 ORTHO05D001971 7.0e-08 60.8 102 43.1
Cpa.g.sc18.19 Carica papaya HOM05D001958 ORTHO05D001971 1.2e-07 60.1 106 40.6
ECA236G3461 Erigeron canadensis HOM05D001958 ORTHO05D001971 1.2e-07 60.1 118 39.0
Prupe.2G186100 Prunus persica HOM05D001958 ORTHO05D001971 1.2e-07 60.1 100 39.0
Ca_10294_v3 Cicer arietinum L. HOM05D001958 ORTHO05D001971 1.6e-07 59.7 102 42.2
Ca_30261_v3 Cicer arietinum L. HOM05D001958 ORTHO05D001971 1.6e-07 59.7 102 42.2
THA.LOC104825945 Tarenaya hassleriana HOM05D001958 ORTHO05D001971 1.6e-07 59.7 98 41.8
BcaC07g37002 Brassica carinata HOM05D001958 ORTHO05D001971 2.0e-07 59.3 63 52.4
C08p00150 Brassica napus HOM05D001958 ORTHO05D001971 2.0e-07 59.3 63 52.4
BolC8t46818H Brassica oleracea HOM05D001958 ORTHO05D001971 2.0e-07 59.3 63 52.4
MBI18_g28457_MAGBIO Magnolia biondii HOM05D001958 ORTHO05D001971 2.0e-07 59.3 113 38.9
Psat3g002800 Pisum sativum HOM05D001958 ORTHO05D001971 2.0e-07 59.3 98 39.8
BcaC07g42308 Brassica carinata HOM05D001958 ORTHO05D001971 2.7e-07 58.9 102 41.2
CARHR001940 Cardamine hirsuta HOM05D001958 ORTHO05D001971 2.7e-07 58.9 103 38.8
MBI07_g27258_MAGBIO Magnolia biondii HOM05D001958 ORTHO05D001971 2.7e-07 58.9 98 38.8
Aqoxy2G02792 Aquilegia oxysepala HOM05D001958 ORTHO05D001971 3.5e-07 58.5 104 43.3
Cfa005823 Carpinus fangiana HOM05D001958 ORTHO05D001971 3.5e-07 58.5 102 41.2
Gohir.D08G139600 Gossypium hirsutum HOM05D001958 ORTHO05D001971 3.5e-07 58.5 104 41.3
Gorai.004G143700 Gossypium raimondii HOM05D001958 ORTHO05D001971 3.5e-07 58.5 104 41.3
HanXRQChr06g0167811 Helianthus annuus HOM05D001958 ORTHO05D001971 3.5e-07 58.5 117 39.3
Lalb_Chr06g0166801 Lupinus albus HOM05D001958 ORTHO05D001971 3.5e-07 58.5 102 42.2
Oeu037977.2 Olea europaea HOM05D001958 ORTHO05D001971 3.5e-07 58.5 53 50.9
Phvul.007G215600 Phaseolus vulgaris HOM05D001958 ORTHO05D001971 3.5e-07 58.5 102 39.2
Prupe.8G270300 Prunus persica HOM05D001958 ORTHO05D001971 3.5e-07 58.5 101 39.6
VMungo1383G3258 Vigna mungo HOM05D001958 ORTHO05D001971 3.5e-07 58.5 106 41.5
GSVIVG01028099001 Vitis vinifera HOM05D001958 ORTHO05D001971 3.5e-07 58.5 68 52.9
arahy.Tifrunner.gnm1.ann1.7L16MH Arachis hypogaea HOM05D001958 ORTHO05D001971 4.5e-07 58.2 61 50.8
Thhalv10006955m.g Eutrema salsugineum HOM05D001958 ORTHO05D001971 4.5e-07 58.2 102 43.1
Lj5g0024869 Lotus japonicus HOM05D001958 ORTHO05D001971 4.5e-07 58.2 102 41.2
Zm00001eb358370 Zea mays HOM05D001958 ORTHO05D001971 4.5e-07 58.2 100 40.0
Glyma.03G218400 Glycine max HOM05D001958 ORTHO05D001971 5.9e-07 57.8 103 40.8
arahy.Tifrunner.gnm1.ann1.I8E435 Arachis hypogaea HOM05D001958 ORTHO05D001971 7.7e-07 57.4 48 58.3
A08p37610 Brassica napus HOM05D001958 ORTHO05D001971 7.7e-07 57.4 102 40.2
CiPaw.01G074600 Carya illinoinensis HOM05D001958 ORTHO05D001971 7.7e-07 57.4 100 39.0
Hund02933 Selenicereus undatus HOM05D001958 ORTHO05D001971 7.7e-07 57.4 108 38.9
TWI59G1000 Tripterygium wilfordii HOM05D001958 ORTHO05D001971 7.7e-07 57.4 99 36.4
BcaB03g13506 Brassica carinata HOM05D001958 ORTHO05D001971 1.0e-06 57.0 102 41.2
CSS0039923 Camellia sinensis var. sinensis HOM05D001958 ORTHO05D001971 1.0e-06 57.0 98 36.7
AUR62023478 Chenopodium quinoa HOM05D001958 ORTHO05D001971 1.0e-06 57.0 99 37.4
Sc05g0000540 Simmondsia chinensis HOM05D001958 ORTHO05D001971 1.0e-06 57.0 108 44.4
THA.LOC104825944 Tarenaya hassleriana HOM05D001958 ORTHO05D001971 1.0e-06 57.0 97 40.2
Ca_09501_v3 Cicer arietinum L. HOM05D001958 ORTHO05D001971 1.3e-06 56.6 98 36.7
Duzib138G1331 Durio zibethinus HOM05D001958 ORTHO05D001971 1.3e-06 56.6 107 39.3
Nitab4.5_0000906g0020 Nicotiana tabacum HOM05D001958 ORTHO05D001971 1.3e-06 56.6 108 39.8
Oeu005866.2 Olea europaea HOM05D001958 ORTHO05D001971 1.3e-06 56.6 105 37.1
Oeu014951.1 Olea europaea HOM05D001958 ORTHO05D001971 1.3e-06 56.6 109 40.4
PSO135G0346 Papaver somniferum HOM05D001958 ORTHO05D001971 1.3e-06 56.6 103 37.9
Phvul.001G211900 Phaseolus vulgaris HOM05D001958 ORTHO05D001971 1.3e-06 56.6 105 41.0
TAR636G2954 Trochodendron aralioides HOM05D001958 ORTHO05D001971 1.3e-06 56.6 94 40.4
Aa31LG1G9900 Aethionema arabicum HOM05D001958 ORTHO05D001971 1.7e-06 56.2 86 44.2
DCAR_002878 Daucus carota HOM05D001958 ORTHO05D001971 1.7e-06 56.2 117 40.2
PSO384G1291 Papaver somniferum HOM05D001958 ORTHO05D001971 1.7e-06 56.2 98 41.8
CSS0032589 Camellia sinensis var. sinensis HOM05D001958 ORTHO05D001971 2.3e-06 55.8 98 36.7
Carub.0005s2925 Capsella rubella HOM05D001958 ORTHO05D001971 2.3e-06 55.8 102 34.3
AUR62004472 Chenopodium quinoa HOM05D001958 ORTHO05D001971 2.3e-06 55.8 98 38.8
MELO3C015936.2 Cucumis melo HOM05D001958 ORTHO05D001971 2.3e-06 55.8 102 36.3
CsaV3_7G029850 Cucumis sativus L. HOM05D001958 ORTHO05D001971 2.3e-06 55.8 102 36.3
HanXRQChr15g0464201 Helianthus annuus HOM05D001958 ORTHO05D001971 2.3e-06 55.8 117 37.6
Nn3g21646 Nelumbo nucifera HOM05D001958 ORTHO05D001971 2.3e-06 55.8 95 40.0
TAR362G1131 Trochodendron aralioides HOM05D001958 ORTHO05D001971 2.3e-06 55.8 50 58.0
GSVIVG01027081001 Vitis vinifera HOM05D001958 ORTHO05D001971 2.3e-06 55.8 105 36.2
EL10Ac1g00292 Beta vulgaris HOM05D001958 ORTHO05D001971 2.9e-06 55.5 94 39.4
EL10As5g23504 Beta vulgaris HOM05D001958 ORTHO05D001971 2.9e-06 55.5 105 39.0
Ciclev10018997m.g Citrus clementina HOM05D001958 ORTHO05D001971 2.9e-06 55.5 105 37.1
Dinv36277 Davidia involucrata HOM05D001958 ORTHO05D001971 2.9e-06 55.5 102 37.3
Gohir.D11G115500 Gossypium hirsutum HOM05D001958 ORTHO05D001971 2.9e-06 55.5 102 38.2
Gorai.007G123600 Gossypium raimondii HOM05D001958 ORTHO05D001971 2.9e-06 55.5 102 38.2
Nitab4.5_0001301g0140 Nicotiana tabacum HOM05D001958 ORTHO05D001971 2.9e-06 55.5 113 38.9
Peaxi162Scf00001g00222 Petunia axillaris HOM05D001958 ORTHO05D001971 2.9e-06 55.5 50 56.0
ATR0706G200 Amborella trichopoda HOM05D001958 ORTHO05D001971 3.8e-06 55.1 106 40.6
Dinv32572 Davidia involucrata HOM05D001958 ORTHO05D001971 3.8e-06 55.1 98 37.8
Lalb_Chr21g0309491 Lupinus albus HOM05D001958 ORTHO05D001971 3.8e-06 55.1 76 47.4
Atru.chr5.1038 Acer truncatum HOM05D001958 ORTHO05D001971 5.0e-06 54.7 102 41.2
Actinidia20221 Actinidia chinensis HOM05D001958 ORTHO05D001971 5.0e-06 54.7 100 37.0
Gohir.A11G096400 Gossypium hirsutum HOM05D001958 ORTHO05D001971 5.0e-06 54.7 98 38.8
Gohir.A11G110400 Gossypium hirsutum HOM05D001958 ORTHO05D001971 5.0e-06 54.7 102 38.2
Gohir.D11G101100 Gossypium hirsutum HOM05D001958 ORTHO05D001971 5.0e-06 54.7 98 38.8
Lalb_Chr02g0146711 Lupinus albus HOM05D001958 ORTHO05D001971 5.0e-06 54.7 45 62.2
vmacro02411 Vaccinium macrocarpon HOM05D001958 ORTHO05D001971 5.0e-06 54.7 102 42.2
Ca_09202_v3 Cicer arietinum L. HOM05D001958 ORTHO05D001971 6.6e-06 54.3 81 45.7
DCAR_005772 Daucus carota HOM05D001958 ORTHO05D001971 6.6e-06 54.3 50 54.0
Glyma.03G256900 Glycine max HOM05D001958 ORTHO05D001971 6.6e-06 54.3 98 34.7
Glyma.19G215200 Glycine max HOM05D001958 ORTHO05D001971 6.6e-06 54.3 45 57.8
Gohir.A08G118900 Gossypium hirsutum HOM05D001958 ORTHO05D001971 6.6e-06 54.3 102 38.2
Gohir.D12G114900 Gossypium hirsutum HOM05D001958 ORTHO05D001971 6.6e-06 54.3 102 36.3
Lj9A596G50 Lonicera japonica HOM05D001958 ORTHO05D001971 6.6e-06 54.3 102 33.3
Lj1g0008857 Lotus japonicus HOM05D001958 ORTHO05D001971 6.6e-06 54.3 98 36.7
SMO232G0047 Selaginella moellendorffii HOM05D001958 ORTHO05D001971 6.6e-06 54.3 105 36.2
ClCG09G005220 Citrullus lanatus HOM05D001958 ORTHO05D001971 8.6e-06 53.9 102 37.3
COL.COLO4_06301 Corchorus olitorius HOM05D001958 ORTHO05D001971 8.6e-06 53.9 104 39.4
Lsat_1_v5_gn_9_680 Lactuca sativa HOM05D001958 ORTHO05D001971 8.6e-06 53.9 93 41.9
Nitab4.5_0000838g0070 Nicotiana tabacum HOM05D001958 ORTHO05D001971 8.6e-06 53.9 110 34.5
Rhsim13G0006000 Rhododendron simsii HOM05D001958 ORTHO05D001971 8.6e-06 53.9 102 40.2
PGSC0003DMG400000101 Solanum tuberosum HOM05D001958 ORTHO05D001971 8.6e-06 53.9 104 39.4


User provided reference genes

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