Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08447 Sequoiadendron giganteum HOM05D000626 ORTHO05D003868 6.6e-165 583.9 293 100.0
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 1.0e-19 101.7 99 59.6
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 1.3e-19 101.3 74 74.3
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 1.3e-19 101.3 76 71.1
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 2.2e-19 100.5 76 71.1
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 2.9e-19 100.1 118 53.4
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 2.9e-19 100.1 99 60.6
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 2.9e-19 100.1 101 58.4
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 3.8e-19 99.8 101 57.4
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 3.8e-19 99.8 78 69.2
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 3.8e-19 99.8 76 71.1
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 5.0e-19 99.4 76 71.1
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 5.0e-19 99.4 100 57.0
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 5.0e-19 99.4 76 69.7
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 6.5e-19 99.0 76 69.7
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 6.5e-19 99.0 76 69.7
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 6.5e-19 99.0 137 49.6
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 6.5e-19 99.0 76 69.7
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 6.5e-19 99.0 76 71.1
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 8.5e-19 98.6 99 58.6
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 1.1e-18 98.2 76 69.7
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 1.1e-18 98.2 77 68.8
Dinv23553 Davidia involucrata HOM05D000626 ORTHO05D003868 1.1e-18 98.2 77 67.5
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 1.1e-18 98.2 76 69.7
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 1.4e-18 97.8 76 69.7
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 1.4e-18 97.8 76 69.7
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 1.4e-18 97.8 74 70.3
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 1.4e-18 97.8 76 68.4
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 1.4e-18 97.8 76 69.7
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 1.4e-18 97.8 76 68.4
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.4e-18 97.8 94 59.6
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 1.4e-18 97.8 76 68.4
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 1.9e-18 97.4 97 56.7
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 1.9e-18 97.4 99 58.6
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 1.9e-18 97.4 76 69.7
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.9e-18 97.4 76 67.1
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 1.9e-18 97.4 76 67.1
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 1.9e-18 97.4 76 67.1
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 2.5e-18 97.1 101 55.4
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 2.5e-18 97.1 101 55.4
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 2.5e-18 97.1 76 68.4
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 2.5e-18 97.1 76 68.4
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 3.2e-18 96.7 76 67.1
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 3.2e-18 96.7 76 67.1
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 3.2e-18 96.7 76 68.4
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 3.2e-18 96.7 76 69.7
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 3.2e-18 96.7 76 69.7
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 4.2e-18 96.3 76 68.4
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 4.2e-18 96.3 132 47.0
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 4.2e-18 96.3 76 67.1
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 5.5e-18 95.9 74 67.6
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 5.5e-18 95.9 76 67.1
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 5.5e-18 95.9 76 68.4
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 5.5e-18 95.9 76 67.1
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 5.5e-18 95.9 76 67.1
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 5.5e-18 95.9 76 67.1
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 5.5e-18 95.9 76 65.8
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 5.5e-18 95.9 80 65.0
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 5.5e-18 95.9 76 67.1
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 7.2e-18 95.5 76 67.1
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 7.2e-18 95.5 76 67.1
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 7.2e-18 95.5 76 65.8
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 7.2e-18 95.5 76 65.8
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 7.2e-18 95.5 101 56.4
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 9.4e-18 95.1 94 55.3
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 9.4e-18 95.1 89 59.6
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 9.4e-18 95.1 76 68.4
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 9.4e-18 95.1 76 68.4
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 9.4e-18 95.1 99 58.6
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 9.4e-18 95.1 74 68.9
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 9.4e-18 95.1 76 65.8
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 68.9
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 1.2e-17 94.7 76 68.4
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 1.2e-17 94.7 74 67.6
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.2e-17 94.7 76 64.5
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 1.6e-17 94.4 76 67.1
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 1.6e-17 94.4 76 65.8
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 2.1e-17 94.0 99 57.6
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 2.1e-17 94.0 74 67.6
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 2.1e-17 94.0 76 68.4
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 2.7e-17 93.6 76 65.8
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 2.7e-17 93.6 76 63.2
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 2.7e-17 93.6 101 55.4
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 3.6e-17 93.2 75 68.0
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 4.6e-17 92.8 76 63.2
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 4.6e-17 92.8 99 55.6
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 4.6e-17 92.8 101 55.4
SEGI_39401 Sequoiadendron giganteum HOM05D000626 ORTHO05D031301 4.6e-17 92.8 56 91.1
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 6.1e-17 92.4 74 66.2
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 6.1e-17 92.4 74 67.6
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 6.1e-17 92.4 74 67.6
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 7.9e-17 92.0 76 65.8
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 7.9e-17 92.0 101 58.4
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 7.9e-17 92.0 76 67.1
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 1.0e-16 91.7 81 60.5
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.0e-16 91.7 74 66.2
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 1.4e-16 91.3 98 56.1
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 1.4e-16 91.3 76 65.8
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 1.4e-16 91.3 74 68.9
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 1.8e-16 90.9 76 65.8
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 1.8e-16 90.9 76 64.5
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 1.8e-16 90.9 75 65.3
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 2.3e-16 90.5 76 63.2
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 2.3e-16 90.5 81 60.5
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 2.3e-16 90.5 94 58.5
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 3.0e-16 90.1 81 59.3
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 3.0e-16 90.1 97 52.6
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 3.0e-16 90.1 78 60.3
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 3.9e-16 89.7 76 64.5
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 5.1e-16 89.4 78 62.8
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 5.1e-16 89.4 74 66.2
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 5.1e-16 89.4 74 64.9
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 5.1e-16 89.4 74 64.9
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 6.7e-16 89.0 101 54.5
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 6.7e-16 89.0 94 56.4
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 6.7e-16 89.0 76 65.8
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 6.7e-16 89.0 97 54.6
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 6.7e-16 89.0 76 61.8
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 8.8e-16 88.6 74 64.9
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 2.0e-15 87.4 90 54.4
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 2.0e-15 87.4 76 60.5
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 2.5e-15 87.0 101 51.5
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 2.5e-15 87.0 74 63.5
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 2.5e-15 87.0 74 63.5
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 3.3e-15 86.7 99 56.6
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 4.3e-15 86.3 75 64.0
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 5.7e-15 85.9 76 59.2
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 9.7e-15 85.1 101 53.5
CBR_g28880 Chara braunii HOM05D000626 ORTHO05D003868 1.3e-14 84.7 77 59.7
Duzib251G0751 Durio zibethinus HOM05D000626 ORTHO05D003868 1.3e-14 84.7 74 63.5
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 2.2e-14 84.0 73 65.8
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 1.1e-13 81.6 75 60.0
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 4.1e-13 79.7 75 64.0
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 4.1e-13 79.7 76 61.8
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 9.1e-13 78.6 76 60.5
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 1.5e-12 77.8 101 49.5
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 1.5e-12 77.8 76 59.2
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 1.3e-11 74.7 76 56.6
SEGI_35273 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.3e-11 74.7 103 44.7
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 6.5e-11 72.4 75 60.0
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 4.2e-10 69.7 75 50.7
SEGI_03493 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 3.6e-09 66.6 101 36.6
SEGI_22667 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 4.7e-09 66.2 103 36.9
SEGI_25977 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 6.1e-09 65.9 42 81.0
Aqoxy1G01692 Aquilegia oxysepala HOM05D000626 ORTHO05D031301 1.0e-08 65.1 74 50.0
SEGI_15642 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 1.0e-08 65.1 74 47.3
SEGI_41254 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 1.0e-08 65.1 101 37.6
SEGI_06028 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 3.0e-08 63.5 84 39.3
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 3.9e-08 63.2 60 63.3
Cre14.g614100 Chlamydomonas reinhardtii HOM05D000626 ORTHO05D003868 5.1e-08 62.8 129 32.6
SEGI_21104 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 1.1e-07 61.6 92 38.0
SEGI_21164 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 5.7e-07 59.3 94 38.3
SEGI_23720 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 5.7e-07 59.3 86 36.0
HPP92_010239 Vanilla planifolia HOM05D000626 ORTHO05D003868 7.4e-07 58.9 44 70.5
vmacro23069 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 9.7e-07 58.5 77 50.6
SEGI_30931 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 2.2e-06 57.4 92 40.2
SEGI_14033 Sequoiadendron giganteum HOM05D000359 ORTHO05D000251 8.2e-06 55.5 39 76.9


User provided reference genes

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