Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08440 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.1e-98 361.3 172 100.0
SEGI_09919 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.1e-98 361.3 172 100.0
SEGI_21867 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.1e-98 361.3 172 100.0
SEGI_35056 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.3e-71 271.9 133 94.7
SEGI_20804 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 2.3e-64 249.2 125 92.8
SEGI_20161 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.9e-55 219.5 126 83.3
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 2.1e-38 162.9 148 62.2
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 2.4e-37 159.5 181 51.9
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 6.9e-37 157.9 137 60.6
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.9e-37 157.9 171 56.7
SEGI_38349 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 2.9e-35 152.5 73 98.6
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.0e-33 144.8 90 82.2
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.0e-33 144.8 90 82.2
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.0e-33 144.8 90 82.2
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.0e-33 144.8 90 82.2
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 6.9e-29 131.3 72 84.7
Lj2C1239G84 Lonicera japonica HOM05D007952 ORTHO05D009823 1.2e-28 130.6 75 85.3
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 2.0e-28 129.8 97 70.1
EL10As10g23962 Beta vulgaris HOM05D007952 ORTHO05D009823 2.6e-28 129.4 74 85.1
MBI08_g48227_MAGBIO Magnolia biondii HOM05D007952 ORTHO05D009823 5.9e-28 128.3 74 85.1
Peaxi162Scf00987g00215 Petunia axillaris HOM05D007952 ORTHO05D009823 5.9e-28 128.3 74 85.1
unitig_87.g27919 Utricularia gibba HOM05D007952 ORTHO05D009823 5.9e-28 128.3 74 85.1
unitig_87.g28035 Utricularia gibba HOM05D007952 ORTHO05D009823 5.9e-28 128.3 74 85.1
unitig_91.g26519 Utricularia gibba HOM05D007952 ORTHO05D009823 5.9e-28 128.3 74 85.1
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 7.6e-28 127.9 73 86.3
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 7.6e-28 127.9 73 86.3
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 1.0e-27 127.5 72 86.1
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 1.0e-27 127.5 73 84.9
Atru.chr9.365 Acer truncatum HOM05D007952 ORTHO05D009823 2.2e-27 126.3 73 84.9
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.8e-27 125.6 73 84.9
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 3.8e-27 125.6 73 83.6
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.4e-26 123.6 69 88.4
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 1.2e-25 120.6 72 80.6
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.6e-25 120.2 151 48.3
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 2.1e-25 119.8 68 83.8
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.3e-24 116.3 76 71.1
Oeu022560.1 Olea europaea HOM05D007952 ORTHO05D009823 5.1e-24 115.2 140 49.3
Sc23g0003910 Simmondsia chinensis HOM05D007952 ORTHO05D009823 6.7e-24 114.8 74 77.0
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 7.4e-23 111.3 67 79.1
SEGI_02200 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 8.2e-22 107.8 56 85.7
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 2.4e-21 106.3 67 77.6
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 1.2e-20 104.0 57 82.5
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.2e-20 104.0 57 82.5
Nn6g32821 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.2e-20 104.0 61 83.6
Nn6g32826 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.2e-20 104.0 61 83.6
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 1.5e-20 103.6 73 75.3
Hma1.2p1_0594F.1_g185798 Hydrangea macrophylla HOM05D007952 ORTHO05D009823 1.3e-19 100.5 56 83.9
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.7e-19 100.1 57 82.5
Nitab4.5_0007400g0010 Nicotiana tabacum HOM05D007952 ORTHO05D009823 2.2e-19 99.8 76 67.1
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 2.9e-19 99.4 57 78.9
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 2.9e-19 99.4 54 83.3
CBR_g12953 Chara braunii HOM05D000019 ORTHO05D000048 6.5e-19 98.2 63 73.0
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 4.2e-18 95.5 51 86.3
Nn6g33130 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.5e-18 95.1 56 83.9
Nitab4.5_0004552g0010 Nicotiana tabacum HOM05D000796 ORTHO05D009823 2.1e-17 93.2 57 80.7
Nitab4.5_0001170g0050 Nicotiana tabacum HOM05D010190 ORTHO05D011667 3.6e-17 92.4 193 39.4
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 1.4e-16 90.5 51 82.4
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 3.0e-16 89.4 64 67.2
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 3.9e-16 89.0 52 76.9
Lsat_1_v5_gn_2_20561 Lactuca sativa HOM05D010488 ORTHO05D011667 1.1e-13 80.9 83 55.4
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 9.1e-13 77.8 65 63.1
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 9.1e-13 77.8 72 56.9
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 1.5e-12 77.0 42 83.3
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 7.7e-12 74.7 51 68.6
Potri.005G037850 Populus trichocarpa HOM05D007952 ORTHO05D009823 3.8e-11 72.4 57 64.9
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 1.1e-10 70.9 39 82.1
BolSC91t61267H Brassica oleracea HOM05D007952 ORTHO05D009823 7.2e-10 68.2 52 71.2
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 1.2e-09 67.4 39 76.9
Nitab4.5_0007025g0020 Nicotiana tabacum HOM05D001226 ORTHO05D009823 3.6e-09 65.9 55 60.0
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 8.0e-09 64.7 32 87.5
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 9.7e-07 57.8 66 45.5
CAN.G8.21 Capsicum annuum HOM05D000580 ORTHO05D001362 1.7e-06 57.0 41 61.0
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 2.8e-06 56.2 61 47.5
BolC6t36075H Brassica oleracea HOM05D000963 ORTHO05D009823 4.8e-06 55.5 31 77.4
ECA236G0169 Erigeron canadensis HOM05D000353 ORTHO05D000174 4.8e-06 55.5 29 93.1
Peaxi162Scf00608g00016 Petunia axillaris HOM05D000680 ORTHO05D005619 4.8e-06 55.5 32 78.1
Phvul.002G090600 Phaseolus vulgaris HOM05D010488 ORTHO05D011667 4.8e-06 55.5 30 86.7
Phvul.009G090224 Phaseolus vulgaris HOM05D010488 ORTHO05D011667 4.8e-06 55.5 30 86.7
VMungo0580G0001 Vigna mungo HOM05D010488 ORTHO05D011667 4.8e-06 55.5 30 86.7
CAN.G2251.1 Capsicum annuum HOM05D010190 ORTHO05D011667 6.3e-06 55.1 65 47.7
Lj2g0009977 Lotus japonicus HOM05D010488 ORTHO05D011667 6.3e-06 55.1 30 86.7
Atru.chr13.2455 Acer truncatum HOM05D010488 ORTHO05D011667 8.2e-06 54.7 39 71.8
Hma1.2p1_0594F.1_g185796 Hydrangea macrophylla HOM05D010488 ORTHO05D011667 8.2e-06 54.7 39 71.8
Hma1.2p1_2223F.1_g317436 Hydrangea macrophylla HOM05D010488 ORTHO05D011667 8.2e-06 54.7 39 71.8
Peaxi162Scf00987g00216 Petunia axillaris HOM05D010488 ORTHO05D011667 8.2e-06 54.7 39 71.8


User provided reference genes

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