Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 1.4e-198 696.0 348 100.0
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 3.5e-136 488.8 325 75.4
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 9.4e-134 480.7 343 67.1
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 6.1e-133 478.0 329 69.9
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 8.8e-132 474.2 329 73.3
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 1.5e-131 473.4 329 72.3
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 2.0e-131 473.0 329 72.0
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 1.3e-130 470.3 326 70.2
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.7e-130 469.9 329 70.2
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 4.8e-130 468.4 329 70.5
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.1e-129 467.2 329 68.4
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 5.3e-129 464.9 329 70.2
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 7.0e-129 464.5 326 72.4
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 9.1e-129 464.2 329 71.1
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.2e-128 463.8 326 72.1
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 2.7e-128 462.6 329 71.7
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 3.5e-128 462.2 329 67.5
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 3.5e-128 462.2 326 71.5
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 4.5e-128 461.8 338 70.7
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 7.7e-128 461.1 329 67.5
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 7.7e-128 461.1 329 70.5
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 1.0e-127 460.7 329 70.5
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 1.0e-127 460.7 329 70.8
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 3.8e-127 458.8 326 72.1
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 6.5e-127 458.0 329 66.6
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 1.5e-126 456.8 325 70.5
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 1.5e-126 456.8 329 70.8
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 1.9e-126 456.4 335 69.0
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 7.2e-126 454.5 325 71.7
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 7.2e-126 454.5 326 69.6
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 1.2e-125 453.8 326 70.6
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 1.2e-125 453.8 326 69.9
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 1.6e-125 453.4 329 69.9
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.6e-125 453.4 326 70.2
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 1.6e-125 453.4 326 70.6
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 1.6e-125 453.4 326 70.2
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 2.1e-125 453.0 329 67.8
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 6.1e-125 451.4 328 69.8
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 8.0e-125 451.1 358 64.2
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 8.0e-125 451.1 328 66.8
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 1.0e-124 450.7 325 69.5
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.8e-124 449.9 326 69.0
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 2.3e-124 449.5 325 69.2
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 2.3e-124 449.5 329 68.1
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 2.3e-124 449.5 328 69.5
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 3.0e-124 449.1 329 68.4
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 3.0e-124 449.1 329 69.0
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 4.0e-124 448.7 327 68.5
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 5.2e-124 448.4 329 68.4
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 6.8e-124 448.0 329 69.6
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 8.8e-124 447.6 326 69.0
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.5e-123 446.8 326 69.0
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 9.8e-123 444.1 326 68.7
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.3e-122 443.7 329 66.3
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 1.3e-122 443.7 329 68.4
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 1.7e-122 443.4 324 70.7
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.7e-122 443.4 326 69.0
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 2.2e-122 443.0 326 68.7
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 6.3e-122 441.4 329 68.7
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 6.3e-122 441.4 326 65.6
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 1.1e-121 440.7 325 68.0
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 1.1e-121 440.7 326 63.8
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 2.4e-121 439.5 326 66.3
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.1e-121 438.7 326 68.4
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 5.4e-121 438.3 326 65.0
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 1.2e-120 437.2 329 65.3
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 1.0e-119 434.1 329 67.5
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 8.5e-119 431.0 324 67.0
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 7.2e-118 427.9 353 63.7
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 2.1e-117 426.4 328 67.1
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 2.7e-117 426.0 325 64.3
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 3.6e-117 425.6 326 62.6
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 1.0e-116 424.1 326 62.0
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 1.0e-116 424.1 326 62.0
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 2.3e-116 422.9 326 66.0
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 4.0e-116 422.2 337 60.2
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 4.0e-116 422.2 326 68.4
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 4.0e-116 422.2 326 62.3
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 4.0e-116 422.2 303 71.9
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 5.2e-116 421.8 332 60.2
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 5.2e-116 421.8 330 60.6
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 4.4e-115 418.7 326 63.2
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 1.7e-114 416.8 326 60.7
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 2.8e-114 416.0 326 60.7
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 3.7e-114 415.6 326 61.0
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.8e-113 413.3 326 60.4
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 2.7e-112 409.5 306 68.6
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 5.9e-112 408.3 323 61.9
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 2.9e-111 406.0 326 60.7
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 5.6e-110 401.7 309 67.6
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 2.8e-109 399.4 326 59.2
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 6.4e-106 388.3 328 59.8
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 7.0e-105 384.8 309 61.2
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 1.7e-103 380.2 314 64.6
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 2.3e-103 379.8 313 59.4
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 1.9e-102 376.7 325 58.8
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 2.1e-101 373.2 284 69.0
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 3.6e-101 372.5 332 59.9
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 1.4e-97 360.5 320 55.9
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 7.3e-94 348.2 329 60.2
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 2.1e-93 346.7 323 56.7
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 6.2e-93 345.1 321 59.8
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.2e-91 340.9 326 55.5
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 2.4e-89 333.2 330 55.2
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 2.7e-88 329.7 261 67.4
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 1.2e-85 320.9 314 53.8
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 4.6e-80 302.4 330 48.8
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 3.2e-73 279.6 200 71.5
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 5.1e-71 272.3 227 59.9
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 4.0e-60 236.1 207 55.1
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 3.5e-48 196.4 133 66.2
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.6e-43 180.3 113 71.7
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 7.9e-40 168.7 128 64.8
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.3e-39 167.2 116 66.4
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 8.2e-37 158.7 220 43.2
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 2.2e-29 134.0 83 72.3
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 5.5e-25 119.4 82 75.6
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 8.8e-23 112.1 92 69.6
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 2.8e-21 107.1 134 47.8
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 4.8e-21 106.3 55 81.8
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 7.5e-14 82.4 42 78.6
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.8e-13 79.7 42 76.2
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 1.9e-09 67.8 52 57.7
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 3.4e-06 57.0 49 55.1


User provided reference genes

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