Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08357 Sequoiadendron giganteum HOM05D005342 ORTHO05D006925 5.5e-40 167.2 83 100.0
Potri.001G160800 Populus trichocarpa HOM05D005342 ORTHO05D006925 1.0e-30 136.3 79 78.5
TPR.G34568 Trifolium pratense HOM05D005342 ORTHO05D006925 1.0e-30 136.3 79 78.5
arahy.Tifrunner.gnm1.ann1.EGN9M7 Arachis hypogaea HOM05D005342 ORTHO05D006925 2.3e-30 135.2 79 78.5
arahy.Tifrunner.gnm1.ann1.T4IDLE Arachis hypogaea HOM05D005342 ORTHO05D006925 2.3e-30 135.2 79 78.5
Lalb_Chr10g0095551 Lupinus albus HOM05D005342 ORTHO05D006925 2.3e-30 135.2 79 77.2
Sabra01G0131500 Salix brachista HOM05D005342 ORTHO05D006925 3.9e-30 134.4 78 78.2
Psat6g050320 Pisum sativum HOM05D005342 ORTHO05D006925 6.7e-30 133.7 79 78.5
Glyma.07G173800 Glycine max HOM05D005342 ORTHO05D006925 8.8e-30 133.3 79 77.2
Ca_26328_v3 Cicer arietinum L. HOM05D005342 ORTHO05D006925 1.5e-29 132.5 79 78.5
Phvul.003G015000 Phaseolus vulgaris HOM05D005342 ORTHO05D006925 1.5e-29 132.5 79 74.7
Medtr1g033240 Medicago truncatula HOM05D005342 ORTHO05D006925 2.0e-29 132.1 79 75.9
Medtr5g020440 Medicago truncatula HOM05D005342 ORTHO05D006925 2.0e-29 132.1 79 75.9
Medtr6g024095 Medicago truncatula HOM05D005342 ORTHO05D006925 2.0e-29 132.1 79 75.9
Thecc.02G004100 Theobroma cacao HOM05D005342 ORTHO05D006925 2.6e-29 131.7 79 78.5
AUR62043831 Chenopodium quinoa HOM05D005342 ORTHO05D006925 3.3e-29 131.3 82 70.7
FAN11G0369 Fragaria x ananassa HOM05D005342 ORTHO05D006925 4.4e-29 131.0 79 77.2
FAN16G1572 Fragaria x ananassa HOM05D005342 ORTHO05D006925 4.4e-29 131.0 79 77.2
FAN21G1494 Fragaria x ananassa HOM05D005342 ORTHO05D006925 4.4e-29 131.0 79 77.2
Lj2A343T76 Lonicera japonica HOM05D005342 ORTHO05D006925 4.4e-29 131.0 80 76.2
GSVIVG01012146001 Vitis vinifera HOM05D005342 ORTHO05D006925 4.4e-29 131.0 79 77.2
Lj2g0003117 Lotus japonicus HOM05D005342 ORTHO05D006925 5.7e-29 130.6 79 75.9
RcHm_v2.0_Chr5g0021061 Rosa chinensis HOM05D005342 ORTHO05D006925 5.7e-29 130.6 79 77.2
ClCG01G025520 Citrullus lanatus HOM05D005342 ORTHO05D006925 7.4e-29 130.2 79 74.7
Duzib132G0347 Durio zibethinus HOM05D005342 ORTHO05D006925 9.7e-29 129.8 79 77.2
Gohir.D01G176400 Gossypium hirsutum HOM05D005342 ORTHO05D006925 9.7e-29 129.8 79 75.9
Gorai.002G218700 Gossypium raimondii HOM05D005342 ORTHO05D006925 9.7e-29 129.8 79 75.9
Solyc02g081660.3 Solanum lycopersicum HOM05D005342 ORTHO05D006925 9.7e-29 129.8 79 72.2
Sopen02g026270 Solanum pennellii HOM05D005342 ORTHO05D006925 9.7e-29 129.8 79 72.2
FvH4_3g12950 Fragaria vesca HOM05D005342 ORTHO05D006925 1.3e-28 129.4 79 75.9
THA.LOC104814325 Tarenaya hassleriana HOM05D005342 ORTHO05D006925 1.3e-28 129.4 79 74.7
PGSC0003DMG400017735 Solanum tuberosum HOM05D005342 ORTHO05D006925 1.7e-28 129.0 79 72.2
Actinidia37827 Actinidia chinensis HOM05D005342 ORTHO05D006925 2.2e-28 128.6 79 75.9
AUR62038720 Chenopodium quinoa HOM05D005342 ORTHO05D006925 2.2e-28 128.6 79 72.2
Nn2g13664 Nelumbo nucifera HOM05D005342 ORTHO05D006925 2.8e-28 128.3 80 76.2
MSTRG.16371 Avicennia marina HOM05D005342 ORTHO05D006925 3.7e-28 127.9 79 74.7
Dinv11757 Davidia involucrata HOM05D005342 ORTHO05D006925 3.7e-28 127.9 79 74.7
Prupe.4G117500 Prunus persica HOM05D005342 ORTHO05D006925 3.7e-28 127.9 79 75.9
MELO3C007034.2 Cucumis melo HOM05D005342 ORTHO05D006925 4.8e-28 127.5 79 73.4
Atru.chr10.317 Acer truncatum HOM05D005342 ORTHO05D006925 6.3e-28 127.1 79 72.2
Atru.chr10.349 Acer truncatum HOM05D005342 ORTHO05D006925 6.3e-28 127.1 79 72.2
Gohir.A01G185820 Gossypium hirsutum HOM05D005342 ORTHO05D006925 6.3e-28 127.1 79 74.7
MD05G1246900 Malus domestica HOM05D005342 ORTHO05D006925 6.3e-28 127.1 79 75.9
MD10G1227500 Malus domestica HOM05D005342 ORTHO05D006925 6.3e-28 127.1 79 75.9
Sc17g0004080 Simmondsia chinensis HOM05D005342 ORTHO05D006925 6.3e-28 127.1 79 74.7
Sp1g26820 Schrenkiella parvula HOM05D005342 ORTHO05D006925 8.2e-28 126.7 78 73.1
EL10Ac2g03680 Beta vulgaris HOM05D005342 ORTHO05D006925 1.4e-27 125.9 79 70.9
CAN.G809.68 Capsicum annuum HOM05D005342 ORTHO05D006925 1.4e-27 125.9 78 70.5
DCAR_001275 Daucus carota HOM05D005342 ORTHO05D006925 1.4e-27 125.9 79 72.2
Nitab4.5_0006794g0030 Nicotiana tabacum HOM05D005342 ORTHO05D006925 1.4e-27 125.9 79 70.9
Nitab4.5_0013176g0020 Nicotiana tabacum HOM05D005342 ORTHO05D006925 1.4e-27 125.9 79 70.9
Sed0018199 Sechium edule HOM05D005342 ORTHO05D006925 1.4e-27 125.9 79 73.4
Hund19384 Selenicereus undatus HOM05D005342 ORTHO05D006925 1.4e-27 125.9 79 70.9
Ah.11g044120 Amaranthus hybridus HOM05D005342 ORTHO05D006925 1.8e-27 125.6 79 72.2
CSS0011520 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 1.8e-27 125.6 79 70.9
CSS0036835 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 1.8e-27 125.6 79 70.9
Thhalv10007654m.g Eutrema salsugineum HOM05D005342 ORTHO05D006925 1.8e-27 125.6 80 70.0
BcaB07g32756 Brassica carinata HOM05D005342 ORTHO05D006925 2.4e-27 125.2 78 71.8
BcaC05g27129 Brassica carinata HOM05D005342 ORTHO05D006925 2.4e-27 125.2 78 71.8
A07p09560 Brassica napus HOM05D005342 ORTHO05D006925 2.4e-27 125.2 78 71.8
A09p35250 Brassica napus HOM05D005342 ORTHO05D006925 2.4e-27 125.2 78 71.8
C05p30140 Brassica napus HOM05D005342 ORTHO05D006925 2.4e-27 125.2 78 71.8
C07p14720 Brassica napus HOM05D005342 ORTHO05D006925 2.4e-27 125.2 78 71.8
BolC5t31751H Brassica oleracea HOM05D005342 ORTHO05D006925 2.4e-27 125.2 78 71.8
BolC7t41974H Brassica oleracea HOM05D005342 ORTHO05D006925 2.4e-27 125.2 78 71.8
BraA07t28750Z Brassica rapa HOM05D005342 ORTHO05D006925 2.4e-27 125.2 78 71.8
BraA09t39052Z Brassica rapa HOM05D005342 ORTHO05D006925 2.4e-27 125.2 78 71.8
CsaV3_6G052760 Cucumis sativus L. HOM05D005342 ORTHO05D006925 3.1e-27 124.8 79 72.2
Manes.03G075200 Manihot esculenta HOM05D005342 ORTHO05D006925 3.1e-27 124.8 79 69.6
Peaxi162Scf00520g00219 Petunia axillaris HOM05D005342 ORTHO05D006925 3.1e-27 124.8 79 72.2
PGR004G0306 Punica granatum HOM05D005342 ORTHO05D006925 3.1e-27 124.8 79 72.2
Zm00001eb171110 Zea mays HOM05D005342 ORTHO05D006925 3.1e-27 124.8 77 75.3
CiPaw.09G137700 Carya illinoinensis HOM05D005342 ORTHO05D006925 4.1e-27 124.4 79 74.7
Dinv36886 Davidia involucrata HOM05D005342 ORTHO05D006925 4.1e-27 124.4 79 73.4
Eucgr.D00013 Eucalyptus grandis HOM05D005342 ORTHO05D006925 4.1e-27 124.4 79 70.9
Aa31LG9G16230 Aethionema arabicum HOM05D005342 ORTHO05D006925 5.3e-27 124.0 80 68.8
HPP92_001866 Vanilla planifolia HOM05D005342 ORTHO05D006925 5.3e-27 124.0 80 71.2
AL1G45370 Arabidopsis lyrata HOM05D005342 ORTHO05D006925 9.1e-27 123.2 77 71.4
TWI53G1312 Tripterygium wilfordii HOM05D005342 ORTHO05D006925 9.1e-27 123.2 78 70.5
HPP92_001898 Vanilla planifolia HOM05D005342 ORTHO05D006925 9.1e-27 123.2 79 72.2
ATR0763G223 Amborella trichopoda HOM05D005342 ORTHO05D006925 1.2e-26 122.9 78 78.2
AT1G30960 Arabidopsis thaliana HOM05D005342 ORTHO05D006925 1.2e-26 122.9 77 71.4
Carub.0001s2937 Capsella rubella HOM05D005342 ORTHO05D006925 1.2e-26 122.9 77 71.4
CARHR030500 Cardamine hirsuta HOM05D005342 ORTHO05D006925 1.6e-26 122.5 77 71.4
Ciclev10015344m.g Citrus clementina HOM05D005342 ORTHO05D006925 1.6e-26 122.5 78 73.1
HanXRQChr05g0148741 Helianthus annuus HOM05D005342 ORTHO05D006925 1.6e-26 122.5 79 70.9
SalBow8G1060 Salvia bowleyana HOM05D005342 ORTHO05D006925 1.6e-26 122.5 79 70.9
SGA_v2.0_scaffold175G39327 Striga asiatica HOM05D005342 ORTHO05D006925 1.6e-26 122.5 79 70.9
ECA246G2798 Erigeron canadensis HOM05D005342 ORTHO05D006925 2.6e-26 121.7 79 70.9
Migut.M02010 Erythranthe guttata HOM05D005342 ORTHO05D006925 2.6e-26 121.7 79 70.9
QL11p012260 Quercus lobata HOM05D005342 ORTHO05D006925 2.6e-26 121.7 79 73.4
Atru.chr10.358 Acer truncatum HOM05D002757 ORTHO05D003252 3.5e-26 121.3 77 71.4
TAR626G0514 Trochodendron aralioides HOM05D005342 ORTHO05D006925 4.5e-26 120.9 78 75.6
Cfa001127 Carpinus fangiana HOM05D005342 ORTHO05D006925 7.7e-26 120.2 79 68.4
Os08g0207600 Oryza sativa ssp. japonica HOM05D005342 ORTHO05D006925 1.0e-25 119.8 77 74.0
Cc09_g05200 Coffea canephora HOM05D005342 ORTHO05D006925 1.3e-25 119.4 79 68.4
Oeu016702.1 Olea europaea HOM05D005342 ORTHO05D006925 1.3e-25 119.4 79 70.9
Haze_05265 Corylus avellana HOM05D005342 ORTHO05D006925 1.7e-25 119.0 79 67.1
unitig_749.g13576 Utricularia gibba HOM05D005342 ORTHO05D006925 2.2e-25 118.6 79 69.6
CANSAT35G0196 Cannabis sativa HOM05D005342 ORTHO05D006925 2.9e-25 118.2 79 70.9
Aqoxy1G01397 Aquilegia oxysepala HOM05D005342 ORTHO05D006925 3.8e-25 117.9 79 72.2
vmacro07644 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 3.8e-25 117.9 80 70.0
SHI17083 Sapria himalayana HOM05D005342 ORTHO05D006925 6.5e-25 117.1 81 64.2
vmacro21284 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 6.5e-25 117.1 80 68.8
PSO017G0115 Papaver somniferum HOM05D005342 ORTHO05D006925 8.5e-25 116.7 80 71.2
PSO063G2198 Papaver somniferum HOM05D005342 ORTHO05D006925 8.5e-25 116.7 80 71.2
Lsat_1_v5_gn_6_95820 Lactuca sativa HOM05D005342 ORTHO05D006925 3.2e-24 114.8 79 69.6
CDE03G0515 Ceratophyllum demersum HOM05D005342 ORTHO05D006925 5.2e-22 107.5 79 69.6
SGA_v2.0_scaffold298G47707 Striga asiatica HOM05D005342 ORTHO05D006925 3.3e-21 104.8 120 46.7
SMO347G0253 Selaginella moellendorffii HOM05D005342 ORTHO05D006925 2.4e-19 98.6 80 60.0
Pp3c8_14960 Physcomitrium patens HOM05D005342 ORTHO05D006925 2.0e-18 95.5 80 56.2
Mapoly0029s0109 Marchantia polymorpha HOM05D005342 ORTHO05D006925 1.9e-16 89.0 80 53.8
Zm00001eb285440 Zea mays HOM05D000915 ORTHO05D001662 6.8e-14 80.5 52 71.2
AagrBONN_evm.TU.Sc2ySwM_368.2515 Anthoceros agrestis HOM05D005342 ORTHO05D006925 7.5e-13 77.0 80 47.5
CDE06G1455 Ceratophyllum demersum HOM05D005342 ORTHO05D006925 9.8e-13 76.6 48 70.8
FAN25G1408 Fragaria x ananassa HOM05D005342 ORTHO05D006925 2.2e-12 75.5 48 68.8
Cpa.g.sc1627.2 Carica papaya HOM05D005342 ORTHO05D006925 1.4e-11 72.8 48 62.5
Rhsim03G0048600 Rhododendron simsii HOM05D005342 ORTHO05D006925 9.1e-11 70.1 49 61.2
AUR62020653 Chenopodium quinoa HOM05D005342 ORTHO05D006925 4.5e-10 67.8 82 42.7
CBR_g3497 Chara braunii HOM05D005342 ORTHO05D006925 3.2e-08 61.6 82 42.7
MCO16G643 Micromonas commoda HOM05D005342 ORTHO05D006925 3.2e-08 61.6 79 41.8
Rhsim03G0048000 Rhododendron simsii HOM05D005342 ORTHO05D006925 2.7e-07 58.5 37 67.6
Rhsim05G0150700 Rhododendron simsii HOM05D005342 ORTHO05D006925 2.7e-07 58.5 37 67.6
FAN09G0512 Fragaria x ananassa HOM05D005342 ORTHO05D006925 1.0e-06 56.6 31 87.1
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-06 56.2 30 90.0
Zm00001eb413810 Zea mays HOM05D005342 ORTHO05D006925 5.2e-06 54.3 30 86.7


User provided reference genes

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