Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.6e-88 327.8 156 100.0
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.3e-55 219.2 188 61.7
SEGI_22616 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 3.0e-23 112.5 77 74.0
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 2.2e-18 96.3 170 35.3
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 2.2e-18 96.3 170 35.3
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 3.8e-18 95.5 165 36.4
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 8.5e-18 94.4 164 34.8
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 1.9e-17 93.2 165 32.1
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 7.2e-17 91.3 172 32.0
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 7.2e-17 91.3 168 33.9
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.2e-16 90.5 165 31.5
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 1.2e-16 90.5 160 35.0
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 1.6e-16 90.1 151 36.4
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 1.6e-16 90.1 150 34.0
SEGI_15796 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.1e-16 89.7 48 93.8
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 3.6e-16 89.0 162 33.3
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 4.7e-16 88.6 146 34.2
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 4.7e-16 88.6 153 32.7
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 4.7e-16 88.6 142 37.3
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 4.7e-16 88.6 170 31.2
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 6.1e-16 88.2 146 34.9
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 6.1e-16 88.2 151 33.1
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 6.1e-16 88.2 148 33.8
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 6.1e-16 88.2 168 35.1
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 8.0e-16 87.8 171 34.5
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 8.0e-16 87.8 154 31.8
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 8.0e-16 87.8 68 52.9
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 8.0e-16 87.8 145 35.9
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 1.0e-15 87.4 151 36.4
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 1.0e-15 87.4 150 34.7
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.0e-15 87.4 47 93.6
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 1.4e-15 87.0 146 33.6
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 1.4e-15 87.0 68 55.9
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 1.8e-15 86.7 148 33.8
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 1.8e-15 86.7 151 33.8
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.8e-15 86.7 169 31.4
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 1.8e-15 86.7 68 55.9
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 2.3e-15 86.3 160 33.1
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.3e-15 86.3 168 32.7
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 2.3e-15 86.3 149 32.9
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 3.0e-15 85.9 72 55.6
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 3.0e-15 85.9 71 54.9
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 3.0e-15 85.9 68 52.9
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 3.0e-15 85.9 68 52.9
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 3.0e-15 85.9 173 31.2
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 3.0e-15 85.9 68 52.9
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 3.0e-15 85.9 146 32.9
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 3.9e-15 85.5 165 32.1
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 3.9e-15 85.5 68 52.9
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 5.2e-15 85.1 68 52.9
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 5.2e-15 85.1 143 34.3
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 5.2e-15 85.1 152 32.9
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 5.2e-15 85.1 146 32.9
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 6.7e-15 84.7 164 32.3
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 6.7e-15 84.7 68 52.9
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 8.8e-15 84.3 148 32.4
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 8.8e-15 84.3 150 32.7
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 8.8e-15 84.3 150 32.0
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 8.8e-15 84.3 72 52.8
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 1.1e-14 84.0 146 32.9
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 1.1e-14 84.0 150 33.3
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 1.1e-14 84.0 148 33.8
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 1.5e-14 83.6 150 32.7
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 1.5e-14 83.6 168 32.1
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 1.5e-14 83.6 75 52.0
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 2.0e-14 83.2 146 34.2
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 2.0e-14 83.2 146 33.6
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 2.6e-14 82.8 68 52.9
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 2.6e-14 82.8 148 31.8
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 2.6e-14 82.8 68 51.5
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 2.6e-14 82.8 148 31.8
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.6e-14 82.8 68 51.5
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 2.6e-14 82.8 150 32.7
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 3.3e-14 82.4 146 32.9
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.3e-14 82.4 75 48.0
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 4.4e-14 82.0 68 50.0
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 4.4e-14 82.0 169 32.5
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 4.4e-14 82.0 164 31.7
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 5.7e-14 81.6 68 51.5
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 5.7e-14 81.6 73 46.6
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 7.4e-14 81.3 68 51.5
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 7.4e-14 81.3 68 51.5
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 7.4e-14 81.3 75 49.3
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 7.4e-14 81.3 143 32.9
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 9.7e-14 80.9 72 50.0
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 9.7e-14 80.9 146 32.9
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 1.3e-13 80.5 146 31.5
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 1.3e-13 80.5 74 44.6
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 1.3e-13 80.5 150 33.3
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.7e-13 80.1 73 45.2
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 1.7e-13 80.1 69 52.2
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 2.2e-13 79.7 68 50.0
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 2.2e-13 79.7 68 50.0
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 2.2e-13 79.7 168 31.0
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 2.2e-13 79.7 173 30.1
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 2.8e-13 79.3 134 35.1
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 2.8e-13 79.3 143 30.8
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 3.7e-13 79.0 68 50.0
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 3.7e-13 79.0 76 44.7
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 4.8e-13 78.6 86 44.2
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 6.3e-13 78.2 143 32.2
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 6.3e-13 78.2 158 31.6
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 8.2e-13 77.8 164 31.1
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 8.2e-13 77.8 112 40.2
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 1.1e-12 77.4 72 51.4
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.4e-12 77.0 68 47.1
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.4e-12 77.0 65 50.8
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 1.4e-12 77.0 68 50.0
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.8e-12 76.6 68 45.6
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 1.8e-12 76.6 162 32.7
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 1.8e-12 76.6 72 47.2
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 2.4e-12 76.3 72 45.8
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.4e-12 76.3 162 32.7
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 3.1e-12 75.9 68 50.0
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 4.1e-12 75.5 72 44.4
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 5.3e-12 75.1 164 29.3
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 1.2e-11 73.9 149 29.5
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 3.5e-11 72.4 72 44.4
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 3.5e-11 72.4 72 44.4
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 4.5e-11 72.0 68 45.6
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.5e-11 72.0 73 42.5
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 4.5e-11 72.0 168 28.6
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 2.2e-10 69.7 110 33.6
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 3.8e-10 68.9 72 43.1
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 3.8e-10 68.9 170 28.8
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 5.0e-10 68.6 65 46.2
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 2.5e-09 66.2 72 41.7
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 3.2e-09 65.9 137 34.3
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 8.0e-08 61.2 84 40.5
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 1.0e-07 60.8 64 42.2


User provided reference genes

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