Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 2.3e-215 751.9 360 100.0
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 2.9e-77 293.1 274 52.2
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.2e-76 289.7 275 51.6
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 4.2e-76 289.3 273 51.6
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 9.3e-76 288.1 276 48.9
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.1e-75 287.0 275 50.9
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.5e-75 286.2 274 50.7
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.6e-75 285.8 275 51.3
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 7.8e-75 285.0 287 50.2
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 1.0e-74 284.6 273 49.8
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.3e-74 284.3 274 50.4
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.7e-74 283.9 274 50.7
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 2.3e-74 283.5 283 49.8
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 3.0e-74 283.1 277 51.3
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 6.6e-74 282.0 274 50.7
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 6.6e-74 282.0 266 50.4
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 1.5e-73 280.8 274 49.6
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 4.3e-73 279.3 275 49.8
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 5.6e-73 278.9 275 50.2
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 9.6e-73 278.1 274 50.4
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 9.6e-73 278.1 274 49.6
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 9.6e-73 278.1 276 48.2
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 9.6e-73 278.1 275 49.5
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 1.6e-72 277.3 272 49.3
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 1.6e-72 277.3 279 50.5
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 3.6e-72 276.2 273 50.2
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 8.1e-72 275.0 284 48.2
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 1.4e-71 274.2 274 47.4
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.4e-71 274.2 264 51.5
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 1.4e-71 274.2 274 47.8
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.4e-71 273.5 274 50.4
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 3.1e-71 273.1 256 49.6
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 1.2e-70 271.2 272 49.3
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 1.2e-70 271.2 274 49.3
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 2.0e-70 270.4 271 50.2
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 2.0e-70 270.4 276 47.5
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.6e-70 270.0 271 50.9
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 3.4e-70 269.6 272 50.7
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 4.4e-70 269.2 275 47.6
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 4.4e-70 269.2 279 45.9
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 7.6e-70 268.5 271 49.8
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 9.9e-70 268.1 275 49.8
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 1.3e-69 267.7 279 45.9
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 2.2e-69 266.9 275 46.9
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 2.2e-69 266.9 272 46.0
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 2.2e-69 266.9 272 46.0
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 2.9e-69 266.5 274 46.7
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 4.9e-69 265.8 271 46.5
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 1.4e-68 264.2 271 49.4
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.4e-68 264.2 274 48.2
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.4e-68 264.2 275 46.9
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 1.4e-68 264.2 275 48.0
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.9e-68 263.8 276 46.0
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 2.4e-68 263.5 273 46.9
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 3.2e-68 263.1 277 45.5
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 4.2e-68 262.7 273 45.1
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 7.1e-68 261.9 271 48.3
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 9.3e-68 261.5 273 45.8
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 1.6e-67 260.8 271 47.2
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 2.1e-67 260.4 272 49.6
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.1e-67 260.4 271 49.8
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 2.7e-67 260.0 271 45.4
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 2.7e-67 260.0 274 45.6
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 1.0e-66 258.1 258 49.2
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 1.0e-66 258.1 272 46.3
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.0e-66 258.1 273 47.3
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 1.5e-65 254.2 248 50.4
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 1.9e-65 253.8 275 45.8
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 4.3e-65 252.7 274 44.5
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 7.3e-65 251.9 275 45.5
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 2.1e-64 250.4 276 48.2
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 3.6e-64 249.6 274 44.9
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 6.9e-63 245.4 246 48.4
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 9.0e-63 245.0 271 46.1
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 2.0e-62 243.8 273 46.5
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 9.9e-62 241.5 276 44.6
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.7e-61 240.7 119 96.6
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 3.8e-61 239.6 274 44.2
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 5.5e-60 235.7 293 42.0
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 9.3e-60 235.0 249 46.6
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 6.0e-59 232.3 330 39.4
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 1.8e-58 230.7 272 43.4
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 1.8e-58 230.7 258 44.2
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 1.1e-57 228.0 244 48.0
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 1.5e-57 227.6 252 44.0
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 9.6e-57 224.9 285 41.4
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 9.6e-57 224.9 272 44.9
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 8.1e-56 221.9 272 42.3
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 3.1e-55 219.9 246 43.1
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 4.0e-55 219.5 267 44.6
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 3.8e-53 213.0 216 46.8
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 7.9e-51 205.3 279 40.1
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 1.8e-50 204.1 293 40.3
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 2.3e-50 203.8 255 41.6
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 3.0e-50 203.4 294 40.1
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 3.3e-49 199.9 332 36.1
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 3.3e-49 199.9 240 42.5
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 5.7e-49 199.1 273 40.3
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 1.6e-48 197.6 244 43.9
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 6.3e-48 195.7 324 35.8
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 1.4e-47 194.5 281 39.5
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 4.1e-47 193.0 244 43.0
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 1.3e-45 188.0 208 47.6
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 8.4e-45 185.3 246 39.8
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 2.5e-44 183.7 274 37.2
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 1.0e-42 178.3 214 42.5
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 3.0e-42 176.8 254 39.4
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 8.7e-42 175.3 314 33.8
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 3.3e-41 173.3 190 45.3
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 6.3e-40 169.1 190 44.2
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 6.3e-40 169.1 153 50.3
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 1.1e-39 168.3 191 45.5
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 2.0e-38 164.1 189 42.9
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 3.4e-38 163.3 176 43.8
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 2.9e-37 160.2 170 50.0
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 2.9e-37 160.2 284 33.5
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 2.1e-35 154.1 117 58.1
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 2.3e-34 150.6 119 52.1
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 5.7e-33 146.0 136 50.0
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 8.2e-32 142.1 190 42.1
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 8.5e-29 132.1 190 38.4
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 2.1e-27 127.5 213 35.2
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 2.7e-27 127.1 119 46.2
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 7.4e-25 119.0 149 43.0
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 4.8e-24 116.3 255 30.6
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 2.9e-21 107.1 106 52.8
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.9e-20 104.4 138 42.8
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 4.0e-18 96.7 146 36.3
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 1.7e-16 91.3 134 40.3
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 8.2e-16 89.0 62 59.7
VMungo0331G1881 Vigna mungo HOM05D000590 ORTHO05D006825 2.7e-14 84.0 73 52.1
Lalb_Chr10g0100501 Lupinus albus HOM05D000590 ORTHO05D006825 7.7e-14 82.4 87 46.0
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 1.0e-13 82.0 112 39.3
unitig_747.g21341 Utricularia gibba HOM05D000590 ORTHO05D006825 1.5e-12 78.2 84 46.4
GSVIVG01027101001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.4e-10 71.6 65 49.2
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 6.8e-10 69.3 63 49.2
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 1.2e-09 68.6 127 31.5
BcaC02g10248 Brassica carinata HOM05D000590 ORTHO05D006825 3.7e-08 63.5 64 42.2
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 1.1e-07 62.0 71 45.1


User provided reference genes

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