Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08255 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 3.0e-83 312.4 238 100.0
SEGI_21194 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 1.4e-32 144.1 112 72.3
SEGI_31674 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 1.4e-32 144.1 112 72.3
CDE12G0657 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 1.9e-29 133.7 112 67.9
AUR62004747 Chenopodium quinoa HOM05D001765 ORTHO05D005876 4.3e-29 132.5 113 68.1
AUR62037504 Chenopodium quinoa HOM05D001765 ORTHO05D005876 4.3e-29 132.5 113 68.1
Lalb_Chr07g0182091 Lupinus albus HOM05D001765 ORTHO05D005876 7.3e-29 131.7 112 66.1
TAR365G0409 Trochodendron aralioides HOM05D001765 ORTHO05D005876 9.6e-29 131.3 113 67.3
Ca_21450_v3 Cicer arietinum L. HOM05D001765 ORTHO05D005876 1.6e-28 130.6 112 65.2
Glyma.17G032500 Glycine max HOM05D001765 ORTHO05D005876 1.6e-28 130.6 112 66.1
Peaxi162Scf00065g00002 Petunia axillaris HOM05D001765 ORTHO05D005876 2.1e-28 130.2 99 69.7
TAR633G2429 Trochodendron aralioides HOM05D001765 ORTHO05D005876 2.1e-28 130.2 113 66.4
RcHm_v2.0_Chr4g0424571 Rosa chinensis HOM05D001765 ORTHO05D005876 2.8e-28 129.8 113 66.4
EL10Ac4g08905 Beta vulgaris HOM05D001765 ORTHO05D005876 3.6e-28 129.4 113 66.4
FvH4_4g19461 Fragaria vesca HOM05D001765 ORTHO05D005876 3.6e-28 129.4 113 66.4
Nitab4.5_0000276g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 3.6e-28 129.4 112 64.3
SGA_v2.0_scaffold119G32663 Striga asiatica HOM05D001765 ORTHO05D005876 3.6e-28 129.4 99 68.7
ATR0706G059 Amborella trichopoda HOM05D001765 ORTHO05D005876 4.7e-28 129.0 112 66.1
CANSAT78G1829 Cannabis sativa HOM05D001765 ORTHO05D005876 4.7e-28 129.0 113 67.3
Glyma.07G241300 Glycine max HOM05D001765 ORTHO05D005876 4.7e-28 129.0 112 65.2
Migut.N00048 Erythranthe guttata HOM05D001765 ORTHO05D005876 6.2e-28 128.6 109 64.2
Nn3g21679 Nelumbo nucifera HOM05D001765 ORTHO05D005876 6.2e-28 128.6 113 67.3
Nn4g25612 Nelumbo nucifera HOM05D001765 ORTHO05D005876 6.2e-28 128.6 113 66.4
Potri.010G142400 Populus trichocarpa HOM05D001765 ORTHO05D005876 6.2e-28 128.6 112 64.3
TPR.G16856 Trifolium pratense HOM05D001765 ORTHO05D005876 6.2e-28 128.6 112 64.3
FAN07G0091 Fragaria x ananassa HOM05D001765 ORTHO05D005876 8.1e-28 128.3 113 65.5
Nitab4.5_0000456g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 8.1e-28 128.3 112 64.3
MD16G1157200 Malus domestica HOM05D001765 ORTHO05D005876 1.1e-27 127.9 113 65.5
Manes.03G202700 Manihot esculenta HOM05D001765 ORTHO05D005876 1.1e-27 127.9 112 64.3
Oeu001465.1 Olea europaea HOM05D001765 ORTHO05D005876 1.1e-27 127.9 99 67.7
unitig_749.g13366 Utricularia gibba HOM05D001765 ORTHO05D005876 1.4e-27 127.5 99 67.7
Lalb_Chr13g0298421 Lupinus albus HOM05D001765 ORTHO05D005876 1.8e-27 127.1 112 64.3
Prupe.1G122100 Prunus persica HOM05D001765 ORTHO05D005876 1.8e-27 127.1 113 64.6
Sabra10G0110100 Salix brachista HOM05D001765 ORTHO05D005876 1.8e-27 127.1 112 64.3
Sc13g0006420 Simmondsia chinensis HOM05D001765 ORTHO05D005876 1.8e-27 127.1 113 66.4
Thecc.04G297600 Theobroma cacao HOM05D001765 ORTHO05D005876 1.8e-27 127.1 112 66.1
Actinidia40362 Actinidia chinensis HOM05D001765 ORTHO05D005876 2.4e-27 126.7 100 70.0
arahy.Tifrunner.gnm1.ann1.03CYAA Arachis hypogaea HOM05D001765 ORTHO05D005876 2.4e-27 126.7 112 62.5
Cc03_g00980 Coffea canephora HOM05D001765 ORTHO05D005876 2.4e-27 126.7 99 67.7
Gohir.A09G065500 Gossypium hirsutum HOM05D001765 ORTHO05D005876 2.4e-27 126.7 112 65.2
MD13G1156300 Malus domestica HOM05D001765 ORTHO05D005876 2.4e-27 126.7 113 64.6
Potri.008G107100 Populus trichocarpa HOM05D001765 ORTHO05D005876 2.4e-27 126.7 112 63.4
PGR031G3587 Punica granatum HOM05D001765 ORTHO05D005876 2.4e-27 126.7 112 61.6
VMungo1215G2482 Vigna mungo HOM05D001765 ORTHO05D005876 2.4e-27 126.7 112 64.3
Ah.04g162900 Amaranthus hybridus HOM05D001765 ORTHO05D005876 3.1e-27 126.3 113 66.4
Eucgr.A00351 Eucalyptus grandis HOM05D001765 ORTHO05D005876 3.1e-27 126.3 112 63.4
Gorai.006G079200 Gossypium raimondii HOM05D001765 ORTHO05D005876 3.1e-27 126.3 112 65.2
PSO210G5285 Papaver somniferum HOM05D001765 ORTHO05D005876 3.1e-27 126.3 112 63.4
PSO761G0153 Papaver somniferum HOM05D001765 ORTHO05D005876 3.1e-27 126.3 112 63.4
Sed0022335 Sechium edule HOM05D001765 ORTHO05D005876 3.1e-27 126.3 113 64.6
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 4.0e-27 125.9 117 64.1
Phvul.003G112500 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 4.0e-27 125.9 135 55.6
Sp2g19740 Schrenkiella parvula HOM05D001765 ORTHO05D005876 4.0e-27 125.9 115 64.3
SpUn0021_0110 Schrenkiella parvula HOM05D001765 ORTHO05D005876 4.0e-27 125.9 115 64.3
Atru.chr4.3029 Acer truncatum HOM05D001765 ORTHO05D005876 5.3e-27 125.6 113 63.7
AagrBONN_evm.TU.Sc2ySwM_362.810 Anthoceros agrestis HOM05D001765 ORTHO05D005876 5.3e-27 125.6 117 63.2
MSTRG.21776 Avicennia marina HOM05D001765 ORTHO05D005876 5.3e-27 125.6 99 67.7
CSS0002630 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 5.3e-27 125.6 114 64.9
Cpa.g.sc9.87 Carica papaya HOM05D001765 ORTHO05D005876 5.3e-27 125.6 113 66.4
Gohir.A10G171300 Gossypium hirsutum HOM05D001765 ORTHO05D005876 5.3e-27 125.6 112 65.2
Lsat_1_v5_gn_6_116901 Lactuca sativa HOM05D001765 ORTHO05D005876 5.3e-27 125.6 113 63.7
Oeu063485.1 Olea europaea HOM05D001765 ORTHO05D005876 5.3e-27 125.6 99 67.7
CAN.G874.72 Capsicum annuum HOM05D001765 ORTHO05D005876 6.9e-27 125.2 99 68.7
Nitab4.5_0004323g0040 Nicotiana tabacum HOM05D001765 ORTHO05D005876 6.9e-27 125.2 112 62.5
Prupe.1G073200 Prunus persica HOM05D001765 ORTHO05D005876 6.9e-27 125.2 113 62.8
Ciclev10016311m.g Citrus clementina HOM05D001765 ORTHO05D005876 9.0e-27 124.8 113 63.7
Dinv44303 Davidia involucrata HOM05D001765 ORTHO05D005876 9.0e-27 124.8 99 66.7
Mapoly0023s0038 Marchantia polymorpha HOM05D001765 ORTHO05D005876 9.0e-27 124.8 115 65.2
TWI09G0718 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 9.0e-27 124.8 112 62.5
CARHR182130 Cardamine hirsuta HOM05D001765 ORTHO05D005876 1.2e-26 124.4 116 62.1
Gohir.D09G064400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 1.2e-26 124.4 112 64.3
Sabra08G0081000 Salix brachista HOM05D001765 ORTHO05D005876 1.2e-26 124.4 112 61.6
Sed0021764 Sechium edule HOM05D001765 ORTHO05D005876 1.2e-26 124.4 114 62.3
ClCG06G004640 Citrullus lanatus HOM05D001765 ORTHO05D005876 1.5e-26 124.0 113 62.8
Duzib151G0385 Durio zibethinus HOM05D001765 ORTHO05D005876 1.5e-26 124.0 113 64.6
Thhalv10004753m.g Eutrema salsugineum HOM05D001765 ORTHO05D005876 1.5e-26 124.0 112 64.3
Nitab4.5_0004323g0070 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.5e-26 124.0 112 62.5
Pp3c14_13970 Physcomitrium patens HOM05D001765 ORTHO05D005876 1.5e-26 124.0 114 64.0
TWI73G0761 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 1.5e-26 124.0 112 61.6
Carub.0008s0928 Capsella rubella HOM05D001765 ORTHO05D005876 2.0e-26 123.6 116 62.1
CiPaw.01G139800 Carya illinoinensis HOM05D001765 ORTHO05D005876 2.0e-26 123.6 113 62.8
MBI19_g07244_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 2.0e-26 123.6 114 65.8
Ciclev10005673m.g Citrus clementina HOM05D001765 ORTHO05D005876 2.6e-26 123.2 113 63.7
Haze_01276 Corylus avellana HOM05D001765 ORTHO05D005876 2.6e-26 123.2 113 63.7
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 2.6e-26 123.2 113 63.7
DCAR_002506 Daucus carota HOM05D001765 ORTHO05D005876 2.6e-26 123.2 112 63.4
Gohir.D10G178400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 2.6e-26 123.2 112 64.3
Gorai.011G199400 Gossypium raimondii HOM05D001765 ORTHO05D005876 2.6e-26 123.2 112 64.3
Phvul.008G245800 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 2.6e-26 123.2 111 63.1
Phvul.009G074533 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 2.6e-26 123.2 111 63.1
Psat4g024600 Pisum sativum HOM05D001765 ORTHO05D005876 2.6e-26 123.2 112 61.6
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 2.6e-26 123.2 111 63.1
CiPaw.02G075900 Carya illinoinensis HOM05D001765 ORTHO05D005876 4.4e-26 122.5 113 62.8
HanXRQChr05g0145931 Helianthus annuus HOM05D001765 ORTHO05D005876 4.4e-26 122.5 113 63.7
THA.LOC104802705 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 4.4e-26 122.5 110 63.6
MELO3C023334.2 Cucumis melo HOM05D001765 ORTHO05D005876 5.8e-26 122.1 113 62.8
ECA246G2338 Erigeron canadensis HOM05D001765 ORTHO05D005876 5.8e-26 122.1 113 63.7
Hma1.2p1_0078F.1_g040010 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 5.8e-26 122.1 111 63.1
Aa31LG11G7990 Aethionema arabicum HOM05D001765 ORTHO05D005876 7.6e-26 121.7 109 61.5
AT5G49400 Arabidopsis thaliana HOM05D001765 ORTHO05D005876 7.6e-26 121.7 116 60.3
COL.COLO4_34649 Corchorus olitorius HOM05D001765 ORTHO05D005123 7.6e-26 121.7 112 64.3
THA.LOC104818892 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 7.6e-26 121.7 110 62.7
CSS0034555 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 9.9e-26 121.3 116 63.8
Duzib052G0074 Durio zibethinus HOM05D001765 ORTHO05D005876 9.9e-26 121.3 112 63.4
Hma1.2p1_0013F.1_g008730 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 9.9e-26 121.3 111 63.1
Nitab4.5_0010629g0030 Nicotiana tabacum HOM05D001765 ORTHO05D005876 9.9e-26 121.3 112 60.7
Lj6P689T37 Lonicera japonica HOM05D001765 ORTHO05D005876 1.3e-25 120.9 113 61.9
Aqoxy1G02157 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.7e-25 120.6 113 62.8
CsaV3_2G015100 Cucumis sativus L. HOM05D001765 ORTHO05D005876 1.7e-25 120.6 113 61.9
Rhsim04G0234200 Rhododendron simsii HOM05D001765 ORTHO05D005876 1.7e-25 120.6 112 62.5
vmacro08062 Vaccinium macrocarpon HOM05D001765 ORTHO05D005876 2.2e-25 120.2 111 64.0
COL.COLO4_11257 Corchorus olitorius HOM05D001765 ORTHO05D005876 2.9e-25 119.8 99 67.7
Solyc01g060030.3 Solanum lycopersicum HOM05D001765 ORTHO05D005876 2.9e-25 119.8 112 62.5
Sopen01g026230 Solanum pennellii HOM05D001765 ORTHO05D005876 2.9e-25 119.8 112 62.5
Zm00001eb109890 Zea mays HOM05D001765 ORTHO05D005876 2.9e-25 119.8 96 67.7
QL06p011625 Quercus lobata HOM05D001765 ORTHO05D005876 3.8e-25 119.4 114 63.2
AL8G23110 Arabidopsis lyrata HOM05D001765 ORTHO05D005876 4.9e-25 119.0 114 60.5
BcaC06g30699 Brassica carinata HOM05D001765 ORTHO05D005876 8.4e-25 118.2 113 60.2
BcaNung02601 Brassica carinata HOM05D001765 ORTHO05D005876 8.4e-25 118.2 113 60.2
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 8.4e-25 118.2 115 60.9
A06p38370 Brassica napus HOM05D001765 ORTHO05D005876 8.4e-25 118.2 113 60.2
C07p39890 Brassica napus HOM05D001765 ORTHO05D005876 8.4e-25 118.2 113 60.2
BolC7t44518H Brassica oleracea HOM05D001765 ORTHO05D005876 8.4e-25 118.2 113 60.2
BraA06t26751Z Brassica rapa HOM05D001765 ORTHO05D005876 8.4e-25 118.2 113 60.2
Pp3c14_17690 Physcomitrium patens HOM05D001765 ORTHO05D005876 8.4e-25 118.2 101 63.4
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 1.1e-24 117.9 115 60.9
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 1.1e-24 117.9 115 60.9
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 1.1e-24 117.9 115 60.9
BraA02t08788Z Brassica rapa HOM05D001765 ORTHO05D005876 1.1e-24 117.9 190 56.8
Os11g0199600 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D005876 1.1e-24 117.9 105 64.8
Zm00001eb328920 Zea mays HOM05D001765 ORTHO05D005876 2.4e-24 116.7 96 66.7
Lj4g0023600 Lotus japonicus HOM05D001765 ORTHO05D005876 3.2e-24 116.3 112 60.7
Aqoxy5G01535 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 5.4e-24 115.5 113 61.9
CDE01G0626 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 9.3e-24 114.8 112 61.6
BcaB07g34154 Brassica carinata HOM05D001765 ORTHO05D005876 4.6e-23 112.5 117 56.4
Zm00001eb276930 Zea mays HOM05D001765 ORTHO05D005876 1.3e-22 110.9 94 63.8
Aqoxy5G02976 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.7e-22 110.5 113 60.2
Mapoly0171s0012 Marchantia polymorpha HOM05D001765 ORTHO05D005876 3.0e-22 109.8 98 61.2
Zm00001eb091100 Zea mays HOM05D001765 ORTHO05D005876 5.1e-22 109.0 94 62.8
CBR_g53494 Chara braunii HOM05D000188 ORTHO05D005876 2.4e-19 100.1 115 55.7
GSVIVG01035017001 Vitis vinifera HOM05D001765 ORTHO05D005876 3.8e-17 92.8 83 68.7
SMO340G0272 Selaginella moellendorffii HOM05D001765 ORTHO05D005876 4.9e-17 92.4 87 62.1
Manes.15G005450 Manihot esculenta HOM05D001765 ORTHO05D005876 1.9e-16 90.5 90 55.6
ECA233G0063 Erigeron canadensis HOM05D001765 ORTHO05D005876 2.4e-16 90.1 98 55.1
HanXRQChr13g0395311 Helianthus annuus HOM05D001765 ORTHO05D005876 3.2e-16 89.7 135 43.7
Lsat_1_v5_gn_6_18261 Lactuca sativa HOM05D001765 ORTHO05D005876 3.2e-16 89.7 94 55.3
Zm00001eb408400 Zea mays HOM05D001765 ORTHO05D005876 1.0e-14 84.7 80 62.5
Medtr1g032030 Medicago truncatula HOM05D001765 ORTHO05D005876 1.1e-13 81.3 66 71.2
Medtr1g032370 Medicago truncatula HOM05D001765 ORTHO05D005876 1.1e-13 81.3 66 71.2
CAN.G197.3 Capsicum annuum HOM05D001765 ORTHO05D005876 3.7e-12 76.3 60 70.0
CAN.G201.7 Capsicum annuum HOM05D001765 ORTHO05D005876 1.5e-10 70.9 60 71.7
ATR1159G071 Amborella trichopoda HOM05D001765 ORTHO05D005876 5.5e-08 62.4 66 65.2
ATR1159G054 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.2e-07 61.2 64 50.0
ATR1159G066 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.0e-06 58.2 63 63.5


User provided reference genes

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