Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 8.4e-88 327.0 169 100.0
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 6.6e-40 167.9 138 66.7
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 2.1e-38 162.9 143 62.2
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 1.4e-37 160.2 133 63.2
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 2.3e-37 159.5 138 58.7
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 2.3e-37 159.5 128 65.6
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 4.0e-37 158.7 133 64.7
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 6.8e-37 157.9 138 59.4
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.2e-36 157.1 130 65.4
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 1.2e-36 157.1 139 61.2
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.5e-36 156.8 139 64.0
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 2.0e-36 156.4 130 66.2
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 2.0e-36 156.4 128 62.5
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 3.4e-36 155.6 142 59.9
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 3.4e-36 155.6 126 66.7
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 4.4e-36 155.2 147 58.5
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 7.5e-36 154.5 141 58.2
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 7.5e-36 154.5 128 60.9
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 7.5e-36 154.5 132 64.4
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 7.5e-36 154.5 134 59.0
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 7.5e-36 154.5 130 60.8
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 9.8e-36 154.1 146 58.9
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 1.3e-35 153.7 134 61.9
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.7e-35 153.3 142 59.2
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 2.2e-35 152.9 128 63.3
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 2.2e-35 152.9 134 59.7
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 2.8e-35 152.5 128 63.3
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 3.7e-35 152.1 128 61.7
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 3.7e-35 152.1 132 61.4
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 4.9e-35 151.8 134 59.0
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 6.3e-35 151.4 152 56.6
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 6.3e-35 151.4 128 62.5
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.1e-34 150.6 133 57.1
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 1.1e-34 150.6 133 57.1
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 1.4e-34 150.2 134 57.5
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 1.4e-34 150.2 138 60.1
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 1.8e-34 149.8 127 61.4
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 2.4e-34 149.4 137 57.7
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 3.1e-34 149.1 130 58.5
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 3.1e-34 149.1 133 58.6
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 3.1e-34 149.1 138 58.7
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 3.1e-34 149.1 133 56.4
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 3.1e-34 149.1 133 56.4
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 4.1e-34 148.7 137 59.1
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 5.4e-34 148.3 128 60.2
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 5.4e-34 148.3 128 60.2
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 7.0e-34 147.9 133 55.6
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 9.2e-34 147.5 137 56.9
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 9.2e-34 147.5 137 56.9
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 9.2e-34 147.5 137 58.4
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 9.2e-34 147.5 127 63.0
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 1.2e-33 147.1 142 59.2
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 1.6e-33 146.7 134 59.7
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 2.0e-33 146.4 128 60.2
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 2.0e-33 146.4 125 62.4
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 2.0e-33 146.4 129 60.5
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 2.0e-33 146.4 126 65.1
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 2.7e-33 146.0 125 62.4
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 2.7e-33 146.0 133 61.7
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 2.7e-33 146.0 136 56.6
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 2.7e-33 146.0 121 63.6
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 2.7e-33 146.0 121 63.6
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 7.8e-33 144.4 131 61.8
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 1.0e-32 144.1 131 58.0
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 1.0e-32 144.1 129 58.9
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 1.0e-32 144.1 129 58.9
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 1.0e-32 144.1 129 58.9
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 1.0e-32 144.1 136 55.1
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 1.3e-32 143.7 128 60.2
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.3e-32 143.7 137 54.7
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 1.3e-32 143.7 137 54.7
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 1.3e-32 143.7 133 59.4
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 1.7e-32 143.3 129 62.0
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 1.7e-32 143.3 132 58.3
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.7e-32 143.3 132 58.3
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 1.7e-32 143.3 134 52.2
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.3e-32 142.9 131 58.0
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 2.3e-32 142.9 150 53.3
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 2.9e-32 142.5 132 58.3
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 2.9e-32 142.5 128 59.4
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 2.9e-32 142.5 146 52.7
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 2.9e-32 142.5 135 58.5
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 3.9e-32 142.1 125 56.8
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 3.9e-32 142.1 135 59.3
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 5.0e-32 141.7 137 52.6
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 6.6e-32 141.4 126 60.3
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 6.6e-32 141.4 135 56.3
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 8.6e-32 141.0 137 54.0
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 1.1e-31 140.6 134 56.7
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 2.5e-31 139.4 140 53.6
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 3.3e-31 139.0 143 53.1
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 4.3e-31 138.7 125 56.0
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 9.5e-31 137.5 125 55.2
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 9.5e-31 137.5 128 57.0
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 1.2e-30 137.1 137 52.6
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 1.2e-30 137.1 137 52.6
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 1.6e-30 136.7 125 56.8
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 4.7e-30 135.2 114 57.9
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 8.0e-30 134.4 125 58.4
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 8.0e-30 134.4 137 53.3
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 1.4e-29 133.7 112 67.9
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 1.4e-29 133.7 127 62.2
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 4.0e-29 132.1 182 47.3
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 2.6e-28 129.4 126 54.8
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 3.4e-28 129.0 130 54.6
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 9.8e-28 127.5 82 75.6
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 9.8e-28 127.5 130 50.8
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 1.3e-27 127.1 198 40.4
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 3.7e-27 125.6 116 55.2
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 6.4e-27 124.8 117 60.7
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 1.4e-26 123.6 107 64.5
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 1.1e-21 107.5 115 56.5
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 1.2e-20 104.0 126 54.0
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 9.8e-20 100.9 71 67.6
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 4.9e-19 98.6 98 52.0
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.4e-18 97.1 83 63.9
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.9e-18 96.7 64 71.9
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 3.2e-18 95.9 82 58.5
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.6e-17 93.6 66 63.6
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 6.0e-17 91.7 61 73.8
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 6.6e-16 88.2 55 76.4
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 1.9e-15 86.7 131 40.5
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 9.5e-15 84.3 118 40.7
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 9.5e-15 84.3 59 72.9
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 3.6e-14 82.4 53 71.7
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.7e-14 82.0 52 75.0
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.9e-10 70.1 81 51.9
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 3.9e-08 62.4 75 52.0
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 3.9e-08 62.4 75 52.0
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 1.1e-07 60.8 63 44.4


User provided reference genes

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