Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08221 Sequoiadendron giganteum HOM05D002561 ORTHO05D008175 2.8e-32 141.4 71 100.0
SEGI_18357 Sequoiadendron giganteum HOM05D002561 ORTHO05D008175 2.3e-18 95.1 48 100.0
arahy.Tifrunner.gnm1.ann1.1U19Q5 Arachis hypogaea HOM05D002561 ORTHO05D008175 1.0e-10 69.7 49 73.5
arahy.Tifrunner.gnm1.ann1.M2UU0S Arachis hypogaea HOM05D002561 ORTHO05D008175 1.0e-10 69.7 49 73.5
SalBow8G2957 Salvia bowleyana HOM05D002561 ORTHO05D008175 2.3e-10 68.6 51 70.6
SalBow8G4848 Salvia bowleyana HOM05D002561 ORTHO05D008175 2.3e-10 68.6 51 70.6
Lalb_Chr14g0369571 Lupinus albus HOM05D002561 ORTHO05D008175 3.0e-10 68.2 48 68.8
AagrBONN_evm.TU.Sc2ySwM_117.3804 Anthoceros agrestis HOM05D002561 ORTHO05D008175 3.9e-10 67.8 67 55.2
COL.COLO4_26238 Corchorus olitorius HOM05D002561 ORTHO05D008175 5.1e-10 67.4 49 71.4
Pp3c26_340 Physcomitrium patens HOM05D002561 ORTHO05D008175 5.1e-10 67.4 50 68.0
TWI56G0768 Tripterygium wilfordii HOM05D002561 ORTHO05D008175 5.1e-10 67.4 49 71.4
unitig_22.g6786 Utricularia gibba HOM05D002561 ORTHO05D008175 5.1e-10 67.4 49 73.5
CANSAT25G1258 Cannabis sativa HOM05D002561 ORTHO05D008175 6.6e-10 67.0 49 71.4
Prupe.1G373900 Prunus persica HOM05D002561 ORTHO05D008175 6.6e-10 67.0 52 65.4
VMungo0647G1104 Vigna mungo HOM05D002561 ORTHO05D008175 6.6e-10 67.0 48 70.8
ClCG05G018690 Citrullus lanatus HOM05D002561 ORTHO05D008175 8.6e-10 66.6 49 69.4
Glyma.17G253900 Glycine max HOM05D002561 ORTHO05D008175 8.6e-10 66.6 48 70.8
Thecc.08G034100 Theobroma cacao HOM05D002561 ORTHO05D008175 8.6e-10 66.6 49 71.4
MELO3C003793.2 Cucumis melo HOM05D002561 ORTHO05D008175 1.1e-09 66.2 49 69.4
Thhalv10013185m.g Eutrema salsugineum HOM05D002561 ORTHO05D008175 1.1e-09 66.2 49 71.4
FAN26G2864 Fragaria x ananassa HOM05D002561 ORTHO05D008175 1.1e-09 66.2 51 64.7
QL02p010154 Quercus lobata HOM05D002561 ORTHO05D008175 1.1e-09 66.2 49 67.3
Sed0027585 Sechium edule HOM05D002561 ORTHO05D008175 1.1e-09 66.2 49 69.4
TPR.G30486 Trifolium pratense HOM05D002561 ORTHO05D008175 1.1e-09 66.2 49 71.4
AL8G34040 Arabidopsis lyrata HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 69.4
AT5G57960 Arabidopsis thaliana HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 69.4
BcaB05g22389 Brassica carinata HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
A02p08080 Brassica napus HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
C02p13730 Brassica napus HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
BolC2t07491H Brassica oleracea HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
BraA02t05881Z Brassica rapa HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
Carub.0008s1849 Capsella rubella HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
CARHR271740 Cardamine hirsuta HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
FAN15G1503 Fragaria x ananassa HOM05D002561 ORTHO05D008175 1.5e-09 65.9 51 62.7
Gohir.A05G190200 Gossypium hirsutum HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
Gohir.D05G193600 Gossypium hirsutum HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
Gorai.009G198600 Gossypium raimondii HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
Medtr1g022980 Medicago truncatula HOM05D002561 ORTHO05D008175 1.5e-09 65.9 49 71.4
Haze_22559 Corylus avellana HOM05D002561 ORTHO05D008175 1.9e-09 65.5 49 69.4
CsaV3_3G045490 Cucumis sativus L. HOM05D002561 ORTHO05D008175 1.9e-09 65.5 49 69.4
Duzib093G1612 Durio zibethinus HOM05D002561 ORTHO05D008175 1.9e-09 65.5 49 69.4
Eucgr.F01859 Eucalyptus grandis HOM05D002561 ORTHO05D008175 1.9e-09 65.5 49 69.4
Psat6g009920 Pisum sativum HOM05D002561 ORTHO05D008175 1.9e-09 65.5 49 71.4
RcHm_v2.0_Chr6g0301721 Rosa chinensis HOM05D002561 ORTHO05D008175 1.9e-09 65.5 51 64.7
CSS0039568 Camellia sinensis var. sinensis HOM05D002561 ORTHO05D008175 2.5e-09 65.1 49 65.3
Ca_13381_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 2.5e-09 65.1 49 69.4
Ca_30047_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 2.5e-09 65.1 49 69.4
Ciclev10000772m.g Citrus clementina HOM05D002561 ORTHO05D008175 2.5e-09 65.1 49 69.4
FvH4_2g39280 Fragaria vesca HOM05D002561 ORTHO05D008175 2.5e-09 65.1 49 65.3
FAN27G3197 Fragaria x ananassa HOM05D002561 ORTHO05D008175 2.5e-09 65.1 49 65.3
Atru.chr13.400 Acer truncatum HOM05D002561 ORTHO05D008175 3.3e-09 64.7 49 67.3
Migut.N03115 Erythranthe guttata HOM05D002561 ORTHO05D008175 3.3e-09 64.7 49 71.4
MD15G1022100 Malus domestica HOM05D002561 ORTHO05D008175 3.3e-09 64.7 51 64.7
TAR381G1262 Trochodendron aralioides HOM05D002561 ORTHO05D008175 3.3e-09 64.7 72 52.8
Manes.05G154700 Manihot esculenta HOM05D002561 ORTHO05D008175 4.3e-09 64.3 49 69.4
Phvul.001G011200 Phaseolus vulgaris HOM05D002561 ORTHO05D008175 4.3e-09 64.3 48 68.8
Zm00001eb167660 Zea mays HOM05D002561 ORTHO05D008175 4.3e-09 64.3 50 70.0
Aa31sc143G30 Aethionema arabicum HOM05D002561 ORTHO05D008175 5.6e-09 63.9 49 69.4
Oeu046223.1 Olea europaea HOM05D002561 ORTHO05D008175 5.6e-09 63.9 49 67.3
vmacro21683 Vaccinium macrocarpon HOM05D002561 ORTHO05D008175 5.6e-09 63.9 49 65.3
Cfa013881 Carpinus fangiana HOM05D002561 ORTHO05D008175 7.3e-09 63.5 49 67.3
FAN20G1367 Fragaria x ananassa HOM05D002561 ORTHO05D008175 7.3e-09 63.5 49 63.3
PGR031G3600 Punica granatum HOM05D002561 ORTHO05D008175 7.3e-09 63.5 49 67.3
Hund17196 Selenicereus undatus HOM05D002561 ORTHO05D008175 7.3e-09 63.5 49 67.3
Mapoly0064s0088 Marchantia polymorpha HOM05D002561 ORTHO05D008175 9.5e-09 63.2 50 64.0
Actinidia15362 Actinidia chinensis HOM05D002561 ORTHO05D008175 1.2e-08 62.8 49 67.3
Potri.002G031100 Populus trichocarpa HOM05D002561 ORTHO05D008175 1.2e-08 62.8 49 67.3
Sp6g19630 Schrenkiella parvula HOM05D002561 ORTHO05D008175 1.6e-08 62.4 64 54.7
Lj5g0007882 Lotus japonicus HOM05D002561 ORTHO05D008175 2.1e-08 62.0 50 64.0
MBI05_g12583_MAGBIO Magnolia biondii HOM05D002561 ORTHO05D008175 2.1e-08 62.0 49 67.3
Os11g0592700 Oryza sativa ssp. japonica HOM05D002561 ORTHO05D008175 2.1e-08 62.0 50 68.0
SMO364G0133 Selaginella moellendorffii HOM05D002561 ORTHO05D008175 2.1e-08 62.0 48 60.4
Sc15g0007160 Simmondsia chinensis HOM05D002561 ORTHO05D008175 2.1e-08 62.0 50 72.0
EL10Ac1g00604 Beta vulgaris HOM05D002561 ORTHO05D008175 2.8e-08 61.6 49 67.3
Nn5g29715 Nelumbo nucifera HOM05D002561 ORTHO05D008175 2.8e-08 61.6 49 67.3
HPP92_013173 Vanilla planifolia HOM05D002561 ORTHO05D008175 3.6e-08 61.2 49 67.3
HPP92_013174 Vanilla planifolia HOM05D002561 ORTHO05D008175 3.6e-08 61.2 49 67.3
HPP92_013175 Vanilla planifolia HOM05D002561 ORTHO05D008175 3.6e-08 61.2 49 67.3
CiPaw.08G060900 Carya illinoinensis HOM05D002561 ORTHO05D008175 6.2e-08 60.5 49 65.3
AUR62014473 Chenopodium quinoa HOM05D002561 ORTHO05D008175 6.2e-08 60.5 49 65.3
AUR62034526 Chenopodium quinoa HOM05D002561 ORTHO05D008175 6.2e-08 60.5 49 65.3
DCAR_017516 Daucus carota HOM05D002561 ORTHO05D008175 6.2e-08 60.5 49 65.3
Aqoxy5G01541 Aquilegia oxysepala HOM05D002561 ORTHO05D008175 8.1e-08 60.1 51 60.8
Lsat_1_v5_gn_5_26741 Lactuca sativa HOM05D002561 ORTHO05D008175 8.1e-08 60.1 49 65.3
Lj4A33G81 Lonicera japonica HOM05D002561 ORTHO05D008175 8.1e-08 60.1 48 68.8
Sabra02G0024900 Salix brachista HOM05D002561 ORTHO05D008175 8.1e-08 60.1 46 67.4
GSVIVG01009778001 Vitis vinifera HOM05D002561 ORTHO05D008175 8.1e-08 60.1 49 67.3
Peaxi162Scf00189g00816 Petunia axillaris HOM05D002561 ORTHO05D008175 1.1e-07 59.7 49 65.3
Ah.05g180860 Amaranthus hybridus HOM05D002561 ORTHO05D008175 1.4e-07 59.3 49 65.3
ATR0665G429 Amborella trichopoda HOM05D002561 ORTHO05D008175 1.4e-07 59.3 49 63.3
CDE06G0545 Ceratophyllum demersum HOM05D002561 ORTHO05D008175 1.4e-07 59.3 49 69.4
CBR_g52689 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-07 59.3 52 57.7
Nitab4.5_0001861g0050 Nicotiana tabacum HOM05D002561 ORTHO05D008175 1.4e-07 59.3 49 65.3
Nitab4.5_0013623g0010 Nicotiana tabacum HOM05D002561 ORTHO05D008175 1.4e-07 59.3 49 65.3
Cc10_g02420 Coffea canephora HOM05D002561 ORTHO05D008175 1.8e-07 58.9 49 65.3
CAN.G851.43 Capsicum annuum HOM05D002561 ORTHO05D008175 2.4e-07 58.5 49 65.3
HanXRQChr05g0151221 Helianthus annuus HOM05D002561 ORTHO05D008175 2.4e-07 58.5 49 65.3
Solyc04g080770.3 Solanum lycopersicum HOM05D002561 ORTHO05D008175 2.4e-07 58.5 49 65.3
Sopen04g034360 Solanum pennellii HOM05D002561 ORTHO05D008175 2.4e-07 58.5 49 65.3
PGSC0003DMG400003749 Solanum tuberosum HOM05D002561 ORTHO05D008175 2.4e-07 58.5 49 65.3
Hma1.2p1_0469F.1_g158880 Hydrangea macrophylla HOM05D002561 ORTHO05D008175 3.1e-07 58.2 45 64.4
Hma1.2p1_0469F.1_g158890 Hydrangea macrophylla HOM05D002561 ORTHO05D008175 3.1e-07 58.2 45 64.4
AUR62043867 Chenopodium quinoa HOM05D002561 ORTHO05D034350 1.2e-06 56.2 48 62.5


User provided reference genes

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