Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08188 Sequoiadendron giganteum HOM05D041105 ORTHO05D016106 6.4e-48 194.5 88 100.0
SEGI_34837 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 1.6e-19 100.1 61 82.0
SEGI_29673 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 2.3e-13 79.7 88 50.0
SEGI_14999 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 4.3e-12 75.5 70 50.0
SalBow6G2291 Salvia bowleyana HOM05D000029 ORTHO05D002162 2.1e-11 73.2 71 46.5
SalBow8G1119 Salvia bowleyana HOM05D000029 ORTHO05D002162 2.1e-11 73.2 71 46.5
SEGI_21050 Sequoiadendron giganteum HOM05D041105 ORTHO05D016106 2.4e-10 69.7 87 41.4
MSTRG.15000 Avicennia marina HOM05D000029 ORTHO05D002162 6.9e-10 68.2 76 38.2
SGA_v2.0_scaffold269G46247 Striga asiatica HOM05D000029 ORTHO05D001395 6.9e-10 68.2 68 44.1
SEGI_28714 Sequoiadendron giganteum HOM05D000029 ORTHO05D003879 9.0e-10 67.8 59 55.9
SEGI_32570 Sequoiadendron giganteum HOM05D000029 ORTHO05D003879 9.0e-10 67.8 59 55.9
Migut.M00666 Erythranthe guttata HOM05D000029 ORTHO05D002162 2.6e-09 66.2 70 38.6
Oeu035499.1 Olea europaea HOM05D000029 ORTHO05D002162 3.4e-09 65.9 82 36.6
Oeu009895.2 Olea europaea HOM05D000029 ORTHO05D002162 7.6e-09 64.7 82 35.4
Oeu061819.1 Olea europaea HOM05D000029 ORTHO05D001395 2.2e-08 63.2 58 48.3
Gohir.D12G182700 Gossypium hirsutum HOM05D000094 ORTHO05D003883 6.5e-08 61.6 82 40.2
Gorai.008G195900 Gossypium raimondii HOM05D000094 ORTHO05D003883 6.5e-08 61.6 82 40.2
BolC3t15671H Brassica oleracea HOM05D000053 ORTHO05D000035 8.4e-08 61.2 87 41.4
QL08p040103 Quercus lobata HOM05D000029 ORTHO05D001395 8.4e-08 61.2 69 36.2
SGA_v2.0_scaffold121G33091 Striga asiatica HOM05D000029 ORTHO05D001395 1.1e-07 60.8 57 42.1
Dinv21350 Davidia involucrata HOM05D000029 ORTHO05D002162 1.9e-07 60.1 63 38.1
Duzib084G0520 Durio zibethinus HOM05D000094 ORTHO05D003883 2.5e-07 59.7 69 42.0
Sp1g15370 Schrenkiella parvula HOM05D000029 ORTHO05D002162 2.5e-07 59.7 60 41.7
Peaxi162Scf00003g00403 Petunia axillaris HOM05D000029 ORTHO05D006246 3.2e-07 59.3 61 50.8
A03p27770 Brassica napus HOM05D000053 ORTHO05D000035 4.2e-07 58.9 84 41.7
AUR62023574 Chenopodium quinoa HOM05D000029 ORTHO05D003879 4.2e-07 58.9 90 36.7
Gohir.D02G177400 Gossypium hirsutum HOM05D000029 ORTHO05D001395 5.5e-07 58.5 69 36.2
Gorai.005G199100 Gossypium raimondii HOM05D000029 ORTHO05D001395 5.5e-07 58.5 69 36.2
MBI16_g12448_MAGBIO Magnolia biondii HOM05D000094 ORTHO05D003883 5.5e-07 58.5 72 40.3
MBI16_g38905_MAGBIO Magnolia biondii HOM05D000094 ORTHO05D003883 5.5e-07 58.5 72 40.3
Sabra19G0095900 Salix brachista HOM05D000029 ORTHO05D003879 5.5e-07 58.5 52 53.8
CSS0015756 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D002162 7.1e-07 58.2 79 34.2
PGR031G3806 Punica granatum HOM05D000029 ORTHO05D002162 7.1e-07 58.2 70 38.6
TPR.G6281 Trifolium pratense HOM05D000021 ORTHO05D000010 7.1e-07 58.2 70 42.9
BcaB03g12102 Brassica carinata HOM05D000029 ORTHO05D001395 9.3e-07 57.8 63 42.9
C03p33490 Brassica napus HOM05D000053 ORTHO05D000035 9.3e-07 57.8 84 40.5
Lj8C140T22 Lonicera japonica HOM05D000029 ORTHO05D002162 9.3e-07 57.8 59 42.4
MBI09_g08446_MAGBIO Magnolia biondii HOM05D000029 ORTHO05D003879 9.3e-07 57.8 55 50.9
Atru.chr9.2516 Acer truncatum HOM05D007589 ORTHO05D009610 1.2e-06 57.4 64 43.8
BcaC01g04817 Brassica carinata HOM05D000053 ORTHO05D000035 1.2e-06 57.4 84 40.5
Migut.H00309 Erythranthe guttata HOM05D000029 ORTHO05D001395 1.2e-06 57.4 58 48.3
PSO339G2403 Papaver somniferum HOM05D000029 ORTHO05D006246 1.2e-06 57.4 73 46.6
Ah.16g105980 Amaranthus hybridus HOM05D000517 ORTHO05D000751 1.6e-06 57.0 71 38.0
Ciclev10018613m.g Citrus clementina HOM05D000029 ORTHO05D002586 1.6e-06 57.0 72 44.4
Duzib052G0588 Durio zibethinus HOM05D000029 ORTHO05D001395 1.6e-06 57.0 72 37.5
Duzib093G0312 Durio zibethinus HOM05D000094 ORTHO05D003883 1.6e-06 57.0 69 43.5
Lj2C293T1 Lonicera japonica HOM05D000029 ORTHO05D001395 1.6e-06 57.0 69 40.6
Nn7g36259 Nelumbo nucifera HOM05D000029 ORTHO05D016106 1.6e-06 57.0 62 50.0
Potri.019G084800 Populus trichocarpa HOM05D000029 ORTHO05D003879 1.6e-06 57.0 56 50.0
A08p25500 Brassica napus HOM05D000029 ORTHO05D001395 2.1e-06 56.6 71 39.4
BraA03t11988Z Brassica rapa HOM05D000053 ORTHO05D000035 2.1e-06 56.6 79 41.8
Thhalv10006677m.g Eutrema salsugineum HOM05D000029 ORTHO05D001395 2.1e-06 56.6 67 35.8
Gohir.A03G154500 Gossypium hirsutum HOM05D000029 ORTHO05D001395 2.1e-06 56.6 69 34.8
Mapoly0039s0122 Marchantia polymorpha HOM05D000029 ORTHO05D002586 2.1e-06 56.6 74 39.2
Cpa.g.c30789.1 Carica papaya HOM05D000094 ORTHO05D003883 2.7e-06 56.2 60 41.7
Nn4g23316 Nelumbo nucifera HOM05D000094 ORTHO05D003883 2.7e-06 56.2 60 45.0
Nitab4.5_0000608g0090 Nicotiana tabacum HOM05D000029 ORTHO05D006246 2.7e-06 56.2 61 49.2
SMO144G0184 Selaginella moellendorffii HOM05D009352 ORTHO05D018350 2.7e-06 56.2 58 41.4
AT1G28440 Arabidopsis thaliana HOM05D000029 ORTHO05D001395 3.5e-06 55.8 69 36.2
BcaB03g13927 Brassica carinata HOM05D000029 ORTHO05D001395 3.5e-06 55.8 67 37.3
BcaB07g34039 Brassica carinata HOM05D000029 ORTHO05D002162 3.5e-06 55.8 59 42.4
Carub.0007s1220 Capsella rubella HOM05D000029 ORTHO05D001395 3.5e-06 55.8 59 44.1
CDE05G1299 Ceratophyllum demersum HOM05D007589 ORTHO05D009610 3.5e-06 55.8 69 40.6
DCAR_028142 Daucus carota HOM05D000021 ORTHO05D000010 3.5e-06 55.8 85 36.5
Manes.18G100200 Manihot esculenta HOM05D000029 ORTHO05D003879 3.5e-06 55.8 62 40.3
Mapoly0039s0121 Marchantia polymorpha HOM05D000029 ORTHO05D002388 3.5e-06 55.8 74 40.5
SEGI_17901 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 3.5e-06 55.8 63 41.3
SGA_v2.0_scaffold73G24365 Striga asiatica HOM05D000029 ORTHO05D002162 3.5e-06 55.8 56 41.1
BcaC06g35370 Brassica carinata HOM05D000029 ORTHO05D001395 4.6e-06 55.5 67 37.3
A07p11200 Brassica napus HOM05D000029 ORTHO05D001395 4.6e-06 55.5 67 37.3
C07p16870 Brassica napus HOM05D000029 ORTHO05D001395 4.6e-06 55.5 67 37.3
BolC7t42193H Brassica oleracea HOM05D000029 ORTHO05D001395 4.6e-06 55.5 67 37.3
BraA07t28910Z Brassica rapa HOM05D000029 ORTHO05D001395 4.6e-06 55.5 67 37.3
Ciclev10006830m.g Citrus clementina HOM05D000021 ORTHO05D000010 4.6e-06 55.5 67 44.8
DCAR_028141 Daucus carota HOM05D000021 ORTHO05D000010 4.6e-06 55.5 71 42.3
Sabra12G0011000 Salix brachista HOM05D000029 ORTHO05D002586 4.6e-06 55.5 75 42.7
SEGI_33244 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 4.6e-06 55.5 72 36.1
Solyc07g056410.3 Solanum lycopersicum HOM05D000029 ORTHO05D002162 4.6e-06 55.5 59 37.3
Sopen07g029780 Solanum pennellii HOM05D000029 ORTHO05D002162 4.6e-06 55.5 59 37.3
Thecc.02G186700 Theobroma cacao HOM05D000029 ORTHO05D001395 4.6e-06 55.5 71 32.4
Actinidia10997 Actinidia chinensis HOM05D000029 ORTHO05D001395 6.0e-06 55.1 71 35.2
Aa31LG2G21930 Aethionema arabicum HOM05D000029 ORTHO05D001395 6.0e-06 55.1 57 42.1
BcaC05g25654 Brassica carinata HOM05D000029 ORTHO05D002162 6.0e-06 55.1 59 40.7
C05p15650 Brassica napus HOM05D000029 ORTHO05D002162 6.0e-06 55.1 59 40.7
BolC5t30272H Brassica oleracea HOM05D000029 ORTHO05D002162 6.0e-06 55.1 59 40.7
Duzib132G1007 Durio zibethinus HOM05D000029 ORTHO05D001395 6.0e-06 55.1 69 34.8
FAN21G3697 Fragaria x ananassa HOM05D000029 ORTHO05D001395 6.0e-06 55.1 69 37.7
Lsat_1_v5_gn_5_121160 Lactuca sativa HOM05D000029 ORTHO05D002162 6.0e-06 55.1 73 34.2
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 6.0e-06 55.1 52 51.9
Sp1g24710 Schrenkiella parvula HOM05D000029 ORTHO05D001395 6.0e-06 55.1 62 37.1
EL10Ac3g07080 Beta vulgaris HOM05D000029 ORTHO05D006246 7.9e-06 54.7 62 48.4
FvH4_3g08530 Fragaria vesca HOM05D000029 ORTHO05D001395 7.9e-06 54.7 72 36.1
FAN11G0577 Fragaria x ananassa HOM05D000029 ORTHO05D001395 7.9e-06 54.7 69 37.7
FAN25G0951 Fragaria x ananassa HOM05D000029 ORTHO05D001395 7.9e-06 54.7 69 37.7
Nitab4.5_0000082g0090 Nicotiana tabacum HOM05D000029 ORTHO05D006246 7.9e-06 54.7 61 47.5
Nitab4.5_0000733g0070 Nicotiana tabacum HOM05D000029 ORTHO05D006246 7.9e-06 54.7 61 47.5
Nitab4.5_0001864g0070 Nicotiana tabacum HOM05D000029 ORTHO05D002162 7.9e-06 54.7 59 39.0
Nitab4.5_0009344g0050 Nicotiana tabacum HOM05D000029 ORTHO05D006246 7.9e-06 54.7 61 47.5
Nitab4.5_0013029g0010 Nicotiana tabacum HOM05D000166 ORTHO05D000812 7.9e-06 54.7 72 44.4
Sabra06G0036300 Salix brachista HOM05D000029 ORTHO05D006246 7.9e-06 54.7 62 45.2
Sed0022739 Sechium edule HOM05D000094 ORTHO05D003883 7.9e-06 54.7 69 42.0
Sopen03g013500 Solanum pennellii HOM05D000029 ORTHO05D008567 7.9e-06 54.7 63 38.1
Sopen04g007680 Solanum pennellii HOM05D000029 ORTHO05D006246 7.9e-06 54.7 64 45.3
TPR.G6206 Trifolium pratense HOM05D000021 ORTHO05D000010 7.9e-06 54.7 58 43.1
VMungo0464G0008 Vigna mungo HOM05D000029 ORTHO05D003879 7.9e-06 54.7 55 45.5


User provided reference genes

Program Settings