Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08072 Sequoiadendron giganteum HOM05D064134 ORTHO05D384707 2.6e-89 332.0 166 100.0
SEGI_27680 Sequoiadendron giganteum HOM05D064134 ORTHO05D386325 1.8e-18 96.7 160 41.2
TAR623G1750 Trochodendron aralioides HOM05D000444 ORTHO05D003472 1.4e-07 60.5 46 54.3
Sc06g0010630 Simmondsia chinensis HOM05D000444 ORTHO05D003472 2.5e-07 59.7 46 52.2
GSVIVG01025132001 Vitis vinifera HOM05D000444 ORTHO05D003472 3.2e-07 59.3 46 50.0
Lj1C184T9 Lonicera japonica HOM05D000444 ORTHO05D003472 4.2e-07 58.9 40 60.0
MD04G1103800 Malus domestica HOM05D000444 ORTHO05D003472 4.2e-07 58.9 40 60.0
Actinidia19710 Actinidia chinensis HOM05D000444 ORTHO05D003472 5.5e-07 58.5 46 54.3
Actinidia25210 Actinidia chinensis HOM05D000444 ORTHO05D003472 5.5e-07 58.5 46 54.3
DCAR_018832 Daucus carota HOM05D000444 ORTHO05D003472 5.5e-07 58.5 46 47.8
DCAR_018835 Daucus carota HOM05D000444 ORTHO05D003472 5.5e-07 58.5 46 47.8
AUR62040044 Chenopodium quinoa HOM05D000444 ORTHO05D003472 7.2e-07 58.2 46 54.3
vmacro03172 Vaccinium macrocarpon HOM05D000444 ORTHO05D003472 7.2e-07 58.2 96 33.3
Haze_20643 Corylus avellana HOM05D000444 ORTHO05D003472 9.4e-07 57.8 46 50.0
Aqoxy2G01666 Aquilegia oxysepala HOM05D000444 ORTHO05D003472 1.2e-06 57.4 40 57.5
CsaV3_6G021620 Cucumis sativus L. HOM05D000444 ORTHO05D003472 1.2e-06 57.4 46 47.8
PSO339G2480 Papaver somniferum HOM05D000444 ORTHO05D003472 1.2e-06 57.4 46 47.8
PSO384G4307 Papaver somniferum HOM05D000444 ORTHO05D003472 1.6e-06 57.0 46 47.8
AT5G02970 Arabidopsis thaliana HOM05D000444 ORTHO05D003472 2.1e-06 56.6 40 52.5
Dinv37258 Davidia involucrata HOM05D000444 ORTHO05D003472 2.1e-06 56.6 46 50.0
FvH4_6g15410 Fragaria vesca HOM05D000444 ORTHO05D003472 2.1e-06 56.6 40 57.5
FAN05G4326 Fragaria x ananassa HOM05D000444 ORTHO05D003472 2.1e-06 56.6 40 57.5
FAN09G1926 Fragaria x ananassa HOM05D000444 ORTHO05D003472 2.1e-06 56.6 40 57.5
FAN14G3296 Fragaria x ananassa HOM05D000444 ORTHO05D003472 2.1e-06 56.6 40 57.5
Lsat_1_v5_gn_6_29740 Lactuca sativa HOM05D000444 ORTHO05D003472 2.1e-06 56.6 40 57.5
Peaxi162Scf00389g00942 Petunia axillaris HOM05D000444 ORTHO05D003472 2.1e-06 56.6 40 50.0
Prupe.6G240800 Prunus persica HOM05D000444 ORTHO05D003472 2.1e-06 56.6 37 59.5
TAR636G1471 Trochodendron aralioides HOM05D000444 ORTHO05D003472 2.1e-06 56.6 46 47.8
MSTRG.5724 Avicennia marina HOM05D000444 ORTHO05D003472 2.7e-06 56.2 40 57.5
Carub.0006s0177 Capsella rubella HOM05D000444 ORTHO05D003472 2.7e-06 56.2 40 52.5
Cpa.g.sc45.37 Carica papaya HOM05D000444 ORTHO05D003472 2.7e-06 56.2 46 50.0
HanXRQChr02g0051311 Helianthus annuus HOM05D000444 ORTHO05D003472 2.7e-06 56.2 40 57.5
MBI05_g24964_MAGBIO Magnolia biondii HOM05D000444 ORTHO05D003472 2.7e-06 56.2 46 50.0
Phvul.007G164100 Phaseolus vulgaris HOM05D000444 ORTHO05D003472 2.7e-06 56.2 40 55.0
THA.LOC104816321 Tarenaya hassleriana HOM05D000444 ORTHO05D003472 2.7e-06 56.2 40 55.0
VMungo0720G1772 Vigna mungo HOM05D000444 ORTHO05D003472 2.7e-06 56.2 40 55.0
CANSAT54G0195 Cannabis sativa HOM05D000444 ORTHO05D003472 3.6e-06 55.8 46 47.8
Eucgr.A01174 Eucalyptus grandis HOM05D000444 ORTHO05D003472 3.6e-06 55.8 40 57.5
Glyma.10G049800 Glycine max HOM05D000444 ORTHO05D003472 3.6e-06 55.8 40 55.0
Hma1.2p1_0350F.1_g132770 Hydrangea macrophylla HOM05D000444 ORTHO05D003472 3.6e-06 55.8 43 53.5
TWI75G0756 Tripterygium wilfordii HOM05D000444 ORTHO05D003472 3.6e-06 55.8 46 50.0
TWI75G0881 Tripterygium wilfordii HOM05D000444 ORTHO05D003472 3.6e-06 55.8 46 50.0
CSS0007878 Camellia sinensis var. sinensis HOM05D000444 ORTHO05D003472 4.7e-06 55.5 40 55.0
Dinv32791 Davidia involucrata HOM05D000444 ORTHO05D003472 4.7e-06 55.5 40 55.0
ECA233G5527 Erigeron canadensis HOM05D000444 ORTHO05D003472 6.1e-06 55.1 40 55.0
FAN02G4085 Fragaria x ananassa HOM05D000444 ORTHO05D003472 6.1e-06 55.1 40 55.0
RcHm_v2.0_Chr3g0468891 Rosa chinensis HOM05D000444 ORTHO05D003472 6.1e-06 55.1 40 55.0
SalBow3G1822 Salvia bowleyana HOM05D000444 ORTHO05D003472 6.1e-06 55.1 40 50.0
Actinidia07115 Actinidia chinensis HOM05D000444 ORTHO05D003472 7.9e-06 54.7 41 48.8
AagrBONN_evm.TU.Sc2ySwM_228.3195 Anthoceros agrestis HOM05D000444 ORTHO05D003472 7.9e-06 54.7 40 52.5
AL6G12260 Arabidopsis lyrata HOM05D000444 ORTHO05D003472 7.9e-06 54.7 40 52.5
arahy.Tifrunner.gnm1.ann1.BP1YKW Arachis hypogaea HOM05D000444 ORTHO05D003472 7.9e-06 54.7 41 51.2
arahy.Tifrunner.gnm1.ann1.W0MI6J Arachis hypogaea HOM05D000444 ORTHO05D003472 7.9e-06 54.7 41 51.2
BcaC06g32023 Brassica carinata HOM05D000444 ORTHO05D003472 7.9e-06 54.7 40 52.5
BcaNung04731 Brassica carinata HOM05D000444 ORTHO05D003472 7.9e-06 54.7 40 52.5
BcaNung05511 Brassica carinata HOM05D000444 ORTHO05D003472 7.9e-06 54.7 40 52.5
A10p32830 Brassica napus HOM05D000444 ORTHO05D003472 7.9e-06 54.7 40 52.5
C09p73730 Brassica napus HOM05D000444 ORTHO05D003472 7.9e-06 54.7 40 52.5
BolC9t60106H Brassica oleracea HOM05D000444 ORTHO05D003472 7.9e-06 54.7 40 52.5
BraA10t45320Z Brassica rapa HOM05D000444 ORTHO05D003472 7.9e-06 54.7 40 52.5
AUR62043159 Chenopodium quinoa HOM05D000444 ORTHO05D003472 7.9e-06 54.7 46 50.0
PGSC0003DMG400001739 Solanum tuberosum HOM05D000444 ORTHO05D003472 7.9e-06 54.7 46 47.8
TWI77G0578 Tripterygium wilfordii HOM05D000444 ORTHO05D003472 7.9e-06 54.7 40 55.0


User provided reference genes

Program Settings