Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 5.4e-107 391.0 193 100.0
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.0e-41 172.2 115 75.7
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.0e-41 172.2 115 75.7
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 9.1e-38 161.0 117 70.1
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 5.0e-20 102.1 94 51.1
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 5.0e-20 102.1 94 51.1
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 1.1e-19 100.9 126 43.7
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 1.5e-19 100.5 86 50.0
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 1.5e-19 100.5 86 53.5
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 1.9e-19 100.1 87 51.7
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.9e-19 100.1 87 52.9
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.9e-19 100.1 86 50.0
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 2.5e-19 99.8 90 48.9
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 2.5e-19 99.8 90 48.9
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 2.5e-19 99.8 87 52.9
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 3.3e-19 99.4 87 52.9
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 3.3e-19 99.4 99 50.5
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 9.5e-19 97.8 87 51.7
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 9.5e-19 97.8 112 46.4
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 9.5e-19 97.8 87 50.6
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 1.2e-18 97.4 107 47.7
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.2e-18 97.4 87 50.6
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.2e-18 97.4 87 49.4
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 1.2e-18 97.4 108 47.2
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 1.6e-18 97.1 87 51.7
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 1.6e-18 97.1 108 43.5
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.6e-18 97.1 83 53.0
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 1.6e-18 97.1 83 53.0
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.1e-18 96.7 87 51.7
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 2.1e-18 96.7 97 47.4
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.1e-18 96.7 112 45.5
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.8e-18 96.3 112 45.5
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.8e-18 96.3 87 49.4
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 2.8e-18 96.3 85 50.6
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 3.6e-18 95.9 102 49.0
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 3.6e-18 95.9 86 51.2
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 4.7e-18 95.5 98 49.0
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 4.7e-18 95.5 86 50.0
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 6.2e-18 95.1 100 48.0
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 8.1e-18 94.7 87 51.7
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 8.1e-18 94.7 92 46.7
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 8.1e-18 94.7 87 49.4
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 8.1e-18 94.7 104 45.2
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 8.1e-18 94.7 98 49.0
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 1.1e-17 94.4 105 43.8
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 1.1e-17 94.4 95 47.4
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 1.1e-17 94.4 87 51.7
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 1.1e-17 94.4 87 50.6
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 1.1e-17 94.4 105 44.8
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.1e-17 94.4 116 44.8
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 1.8e-17 93.6 87 48.3
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.8e-17 93.6 83 51.8
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 2.3e-17 93.2 104 44.2
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 2.3e-17 93.2 93 48.4
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 2.3e-17 93.2 87 49.4
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 2.3e-17 93.2 87 51.7
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 3.1e-17 92.8 77 54.5
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 3.1e-17 92.8 98 44.9
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 3.1e-17 92.8 98 44.9
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 4.0e-17 92.4 106 45.3
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 5.2e-17 92.0 98 46.9
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 5.2e-17 92.0 106 42.5
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 5.2e-17 92.0 94 46.8
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 5.2e-17 92.0 86 51.2
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 6.8e-17 91.7 93 47.3
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 6.8e-17 91.7 106 42.5
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 6.8e-17 91.7 101 46.5
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 6.8e-17 91.7 101 46.5
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 8.9e-17 91.3 95 46.3
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 1.2e-16 90.9 93 47.3
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 1.2e-16 90.9 93 47.3
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 1.5e-16 90.5 106 41.5
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 1.5e-16 90.5 87 51.7
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.5e-16 90.5 86 47.7
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.5e-16 90.5 98 44.9
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 2.0e-16 90.1 101 42.6
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 2.0e-16 90.1 87 48.3
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.6e-16 89.7 86 50.0
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 2.6e-16 89.7 110 44.5
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 2.6e-16 89.7 87 48.3
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 3.4e-16 89.4 107 43.0
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 3.4e-16 89.4 105 42.9
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 3.4e-16 89.4 94 47.9
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 3.4e-16 89.4 97 47.4
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 4.4e-16 89.0 96 43.8
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 4.4e-16 89.0 90 48.9
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 4.4e-16 89.0 87 50.6
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 5.8e-16 88.6 103 45.6
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 5.8e-16 88.6 92 45.7
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 5.8e-16 88.6 105 42.9
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 7.5e-16 88.2 103 45.6
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 7.5e-16 88.2 107 41.1
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 7.5e-16 88.2 89 48.3
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 7.5e-16 88.2 104 41.3
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 9.8e-16 87.8 86 47.7
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 9.8e-16 87.8 86 47.7
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 9.8e-16 87.8 87 47.1
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 1.3e-15 87.4 84 48.8
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 1.3e-15 87.4 84 48.8
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.3e-15 87.4 99 43.4
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 1.3e-15 87.4 95 45.3
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 1.3e-15 87.4 87 44.8
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.3e-15 87.4 83 50.6
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 1.7e-15 87.0 110 43.6
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 2.2e-15 86.7 107 41.1
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 2.9e-15 86.3 101 41.6
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 2.9e-15 86.3 107 41.1
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 3.7e-15 85.9 112 42.0
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 3.7e-15 85.9 83 47.0
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 4.9e-15 85.5 84 48.8
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 6.4e-15 85.1 105 41.0
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 8.3e-15 84.7 118 40.7
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 8.3e-15 84.7 106 40.6
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 1.1e-14 84.3 104 39.4
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.1e-14 84.3 104 41.3
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 1.9e-14 83.6 74 48.6
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 1.9e-14 83.6 88 47.7
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 4.1e-14 82.4 100 42.0
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 4.1e-14 82.4 88 42.0
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 7.1e-14 81.6 99 42.4
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.2e-13 80.9 104 37.5
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 6.0e-13 78.6 95 44.2
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 7.8e-13 78.2 111 41.4
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 2.3e-12 76.6 93 45.2
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 3.0e-12 76.3 105 40.0
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 2.1e-10 70.1 81 40.7
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 6.2e-10 68.6 70 41.4


User provided reference genes

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