Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07958 Sequoiadendron giganteum HOM05D003037 ORTHO05D003659 4.9e-76 287.7 145 100.0
MBI05_g00183_MAGBIO Magnolia biondii HOM05D003037 ORTHO05D003659 8.4e-36 154.1 88 77.3
CiPaw.05G051700 Carya illinoinensis HOM05D003037 ORTHO05D003659 4.2e-35 151.8 88 78.4
PSO541G5800 Papaver somniferum HOM05D003037 ORTHO05D003659 4.2e-35 151.8 88 77.3
PSO675G4829 Papaver somniferum HOM05D003037 ORTHO05D003659 4.2e-35 151.8 88 77.3
Thecc.02G025100 Theobroma cacao HOM05D003037 ORTHO05D003659 4.2e-35 151.8 88 77.3
Ah.03g137100 Amaranthus hybridus HOM05D003037 ORTHO05D003659 5.4e-35 151.4 87 78.2
CAN.G798.49 Capsicum annuum HOM05D003037 ORTHO05D003659 5.4e-35 151.4 88 77.3
FAN03G1983 Fragaria x ananassa HOM05D003037 ORTHO05D003659 7.1e-35 151.0 119 58.8
FAN10G2304 Fragaria x ananassa HOM05D003037 ORTHO05D003659 7.1e-35 151.0 119 58.8
TAR381G0039 Trochodendron aralioides HOM05D003037 ORTHO05D003659 9.3e-35 150.6 88 77.3
QL02p100067 Quercus lobata HOM05D003037 ORTHO05D003659 1.2e-34 150.2 88 76.1
Sopen01g046150 Solanum pennellii HOM05D003037 ORTHO05D003659 1.2e-34 150.2 88 76.1
PGSC0003DMG400024926 Solanum tuberosum HOM05D003037 ORTHO05D003659 1.2e-34 150.2 88 76.1
TAR624G0307 Trochodendron aralioides HOM05D003037 ORTHO05D003659 1.2e-34 150.2 88 76.1
Duzib248G0822 Durio zibethinus HOM05D003037 ORTHO05D003659 2.1e-34 149.4 88 76.1
FvH4_7g02550 Fragaria vesca HOM05D003037 ORTHO05D003659 2.7e-34 149.1 114 60.5
FAN01G1632 Fragaria x ananassa HOM05D003037 ORTHO05D003659 2.7e-34 149.1 114 60.5
FAN06G4382 Fragaria x ananassa HOM05D003037 ORTHO05D003659 2.7e-34 149.1 114 60.5
QL02p100083 Quercus lobata HOM05D003037 ORTHO05D003659 2.7e-34 149.1 114 62.3
Gohir.D04G175800 Gossypium hirsutum HOM05D003037 ORTHO05D003659 3.5e-34 148.7 87 77.0
Gorai.012G167100 Gossypium raimondii HOM05D003037 ORTHO05D003659 3.5e-34 148.7 87 77.0
Oeu036681.1 Olea europaea HOM05D003037 ORTHO05D003659 3.5e-34 148.7 88 76.1
Atru.chr6.760 Acer truncatum HOM05D003037 ORTHO05D003659 4.6e-34 148.3 88 73.9
ATR0661G422 Amborella trichopoda HOM05D003037 ORTHO05D003659 4.6e-34 148.3 88 77.3
Ah.02g126950 Amaranthus hybridus HOM05D003037 ORTHO05D003659 6.0e-34 147.9 88 76.1
Gohir.A04G130600 Gossypium hirsutum HOM05D003037 ORTHO05D003659 6.0e-34 147.9 87 77.0
Gohir.D12G042900 Gossypium hirsutum HOM05D003037 ORTHO05D003659 7.9e-34 147.5 88 76.1
MD10G1009700 Malus domestica HOM05D003037 ORTHO05D003659 7.9e-34 147.5 88 75.0
Cfa005476 Carpinus fangiana HOM05D003037 ORTHO05D003659 1.0e-33 147.1 88 75.0
Migut.B00789 Erythranthe guttata HOM05D003037 ORTHO05D003659 1.0e-33 147.1 108 63.9
RcHm_v2.0_Chr1g0321271 Rosa chinensis HOM05D003037 ORTHO05D003659 1.0e-33 147.1 113 62.8
Solyc01g103750.4 Solanum lycopersicum HOM05D003037 ORTHO05D003659 1.0e-33 147.1 88 75.0
Gohir.A12G043400 Gossypium hirsutum HOM05D003037 ORTHO05D003659 1.3e-33 146.7 88 75.0
HanXRQChr03g0065191 Helianthus annuus HOM05D003037 ORTHO05D003659 1.3e-33 146.7 114 61.4
Oeu000128.2 Olea europaea HOM05D003037 ORTHO05D003659 1.3e-33 146.7 87 77.0
Peaxi162Scf00011g00092 Petunia axillaris HOM05D003037 ORTHO05D003659 1.3e-33 146.7 88 73.9
Sc16g0002460 Simmondsia chinensis HOM05D003037 ORTHO05D003659 1.3e-33 146.7 88 75.0
Actinidia00185 Actinidia chinensis HOM05D003037 ORTHO05D003659 1.8e-33 146.4 88 73.9
C09p23190 Brassica napus HOM05D003037 ORTHO05D003659 1.8e-33 146.4 88 73.9
COL.COLO4_17755 Corchorus olitorius HOM05D003037 ORTHO05D003659 1.8e-33 146.4 114 61.4
Gorai.008G044900 Gossypium raimondii HOM05D003037 ORTHO05D003659 1.8e-33 146.4 88 76.1
Nitab4.5_0000948g0100 Nicotiana tabacum HOM05D003037 ORTHO05D003659 1.8e-33 146.4 88 73.9
Nitab4.5_0002596g0060 Nicotiana tabacum HOM05D003037 ORTHO05D003659 1.8e-33 146.4 88 73.9
Rhsim11G0125200 Rhododendron simsii HOM05D003037 ORTHO05D003659 1.8e-33 146.4 88 75.0
Cc02_g22990 Coffea canephora HOM05D003037 ORTHO05D003659 2.3e-33 146.0 88 71.6
GSVIVG01023275001 Vitis vinifera HOM05D003037 ORTHO05D003659 2.3e-33 146.0 88 73.9
EL10Ac6g14061 Beta vulgaris HOM05D003037 ORTHO05D003659 3.0e-33 145.6 114 60.5
A09p18570 Brassica napus HOM05D003037 ORTHO05D003659 3.0e-33 145.6 114 60.5
BraA09t37483Z Brassica rapa HOM05D003037 ORTHO05D003659 3.0e-33 145.6 114 60.5
CDE05G2487 Ceratophyllum demersum HOM05D003037 ORTHO05D003659 3.0e-33 145.6 89 70.8
Ciclev10004097m.g Citrus clementina HOM05D003037 ORTHO05D003659 3.0e-33 145.6 88 73.9
Duzib052G1010 Durio zibethinus HOM05D003037 ORTHO05D003659 3.0e-33 145.6 88 75.0
Glyma.03G176400 Glycine max HOM05D003037 ORTHO05D003659 3.0e-33 145.6 88 72.7
Lalb_Chr25g0278781 Lupinus albus HOM05D003037 ORTHO05D003659 3.0e-33 145.6 88 73.9
QL04p071344 Quercus lobata HOM05D003037 ORTHO05D000064 3.0e-33 145.6 87 74.7
Glyma.19G177100 Glycine max HOM05D003037 ORTHO05D003659 3.9e-33 145.2 88 71.6
BcaC05g24849 Brassica carinata HOM05D003037 ORTHO05D003659 5.1e-33 144.8 114 58.8
CSS0041282 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 5.1e-33 144.8 88 72.7
CARHR009780 Cardamine hirsuta HOM05D003037 ORTHO05D003659 5.1e-33 144.8 114 59.6
Hma1.2p1_0427F.1_g150700 Hydrangea macrophylla HOM05D003037 ORTHO05D003659 5.1e-33 144.8 88 73.9
MD05G1010900 Malus domestica HOM05D003037 ORTHO05D003659 5.1e-33 144.8 88 72.7
QL02p100111 Quercus lobata HOM05D003037 ORTHO05D003659 5.1e-33 144.8 87 74.7
SalBow3G2424 Salvia bowleyana HOM05D003037 ORTHO05D003659 5.1e-33 144.8 88 75.0
Sed0009851 Sechium edule HOM05D003037 ORTHO05D003659 5.1e-33 144.8 88 71.6
TWI75G1787 Tripterygium wilfordii HOM05D003037 ORTHO05D003659 5.1e-33 144.8 114 59.6
Aa31LG1G5170 Aethionema arabicum HOM05D003037 ORTHO05D003659 6.7e-33 144.4 114 58.8
arahy.Tifrunner.gnm1.ann1.3Q8GGF Arachis hypogaea HOM05D003037 ORTHO05D003659 6.7e-33 144.4 88 71.6
arahy.Tifrunner.gnm1.ann1.Y8ZHMJ Arachis hypogaea HOM05D003037 ORTHO05D003659 6.7e-33 144.4 88 71.6
MSTRG.16497 Avicennia marina HOM05D003037 ORTHO05D003659 6.7e-33 144.4 88 72.7
CSS0012029 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 6.7e-33 144.4 88 72.7
CANSAT35G1041 Cannabis sativa HOM05D003037 ORTHO05D003659 6.7e-33 144.4 114 60.5
BolC9t55238H Brassica oleracea HOM05D003037 ORTHO05D003659 8.7e-33 144.1 114 59.6
Cpa.g.sc30.45 Carica papaya HOM05D003037 ORTHO05D003659 8.7e-33 144.1 88 73.9
ECA240G1415 Erigeron canadensis HOM05D003037 ORTHO05D003659 8.7e-33 144.1 114 59.6
Migut.N00833 Erythranthe guttata HOM05D003037 ORTHO05D003659 8.7e-33 144.1 108 62.0
Manes.07G022900 Manihot esculenta HOM05D003037 ORTHO05D003659 8.7e-33 144.1 86 76.7
A06p06470 Brassica napus HOM05D003037 ORTHO05D003659 1.1e-32 143.7 114 58.8
BraA06t23858Z Brassica rapa HOM05D003037 ORTHO05D003659 1.1e-32 143.7 114 57.9
AUR62014220 Chenopodium quinoa HOM05D003037 ORTHO05D003659 1.1e-32 143.7 114 59.6
Eucgr.G00351 Eucalyptus grandis HOM05D003037 ORTHO05D003659 1.1e-32 143.7 88 71.6
PGR042G0094 Punica granatum HOM05D003037 ORTHO05D003659 1.1e-32 143.7 88 73.9
QL02p100153 Quercus lobata HOM05D003037 ORTHO05D003659 1.1e-32 143.7 88 71.6
BcaC04g22114 Brassica carinata HOM05D003037 ORTHO05D003659 1.5e-32 143.3 128 55.5
CDE11G0137 Ceratophyllum demersum HOM05D003037 ORTHO05D003659 1.5e-32 143.3 88 70.5
Nn4g24648 Nelumbo nucifera HOM05D003037 ORTHO05D003659 1.5e-32 143.3 88 73.9
Sp1g08400 Schrenkiella parvula HOM05D003037 ORTHO05D003659 1.5e-32 143.3 114 58.8
SGA_v2.0_scaffold272G46366 Striga asiatica HOM05D003037 ORTHO05D003659 1.5e-32 143.3 88 73.9
Carub.0001s0915 Capsella rubella HOM05D003037 ORTHO05D003659 1.9e-32 142.9 114 58.8
AUR62041122 Chenopodium quinoa HOM05D003037 ORTHO05D003659 1.9e-32 142.9 114 59.6
RcHm_v2.0_Chr1g0321261 Rosa chinensis HOM05D003037 ORTHO05D003659 1.9e-32 142.9 114 59.6
VMungo0540G1935 Vigna mungo HOM05D003037 ORTHO05D003659 1.9e-32 142.9 86 73.3
HanXRQChr07g0187481 Helianthus annuus HOM05D003037 ORTHO05D003659 2.5e-32 142.5 114 58.8
Medtr4g130680 Medicago truncatula HOM05D003037 ORTHO05D003659 2.5e-32 142.5 114 57.9
Prupe.8G013600 Prunus persica HOM05D003037 ORTHO05D003659 2.5e-32 142.5 114 58.8
SGA_v2.0_scaffold8G04432 Striga asiatica HOM05D003037 ORTHO05D003659 2.5e-32 142.5 114 57.9
AL2G17980 Arabidopsis lyrata HOM05D003037 ORTHO05D003659 3.3e-32 142.1 112 60.7
MELO3C011826.2 Cucumis melo HOM05D003037 ORTHO05D003659 3.3e-32 142.1 88 70.5
Dinv19397 Davidia involucrata HOM05D003037 ORTHO05D003659 3.3e-32 142.1 88 71.6
unitig_747.g21264 Utricularia gibba HOM05D003037 ORTHO05D003659 3.3e-32 142.1 88 71.6
CsaV3_5G029840 Cucumis sativus L. HOM05D003037 ORTHO05D003659 4.3e-32 141.7 88 70.5
RcHm_v2.0_Chr1g0321241 Rosa chinensis HOM05D003037 ORTHO05D003659 4.3e-32 141.7 111 61.3
AT1G09795 Arabidopsis thaliana HOM05D003037 ORTHO05D003659 5.6e-32 141.4 114 57.9
C05p07880 Brassica napus HOM05D003037 ORTHO05D003659 5.6e-32 141.4 114 57.0
BolC5t29539H Brassica oleracea HOM05D003037 ORTHO05D003659 5.6e-32 141.4 114 57.0
DCAR_025355 Daucus carota HOM05D003037 ORTHO05D003659 5.6e-32 141.4 114 57.9
Thhalv10007791m.g Eutrema salsugineum HOM05D003037 ORTHO05D003659 5.6e-32 141.4 114 57.9
Psat1g223400 Pisum sativum HOM05D003037 ORTHO05D003659 5.6e-32 141.4 114 57.0
Carub.0002s0655 Capsella rubella HOM05D003037 ORTHO05D003659 7.4e-32 141.0 112 59.8
TWI12G1167 Tripterygium wilfordii HOM05D003037 ORTHO05D003659 7.4e-32 141.0 114 58.8
AT1G58080 Arabidopsis thaliana HOM05D003037 ORTHO05D003659 9.6e-32 140.6 112 59.8
CARHR053980 Cardamine hirsuta HOM05D003037 ORTHO05D003659 9.6e-32 140.6 112 59.8
THA.LOC104823696 Tarenaya hassleriana HOM05D003037 ORTHO05D003659 9.6e-32 140.6 114 57.9
BcaC02g10704 Brassica carinata HOM05D003037 ORTHO05D003659 1.3e-31 140.2 86 72.1
A03p66520 Brassica napus HOM05D003037 ORTHO05D003659 1.3e-31 140.2 86 72.1
C04p26910 Brassica napus HOM05D003037 ORTHO05D003659 1.3e-31 140.2 86 72.1
BolC4t24107H Brassica oleracea HOM05D003037 ORTHO05D003659 1.3e-31 140.2 86 72.1
BraA03t15703Z Brassica rapa HOM05D003037 ORTHO05D003659 1.3e-31 140.2 86 72.1
ClCG11G013340 Citrullus lanatus HOM05D003037 ORTHO05D003659 1.3e-31 140.2 88 70.5
Thhalv10023501m.g Eutrema salsugineum HOM05D003037 ORTHO05D003659 1.3e-31 140.2 112 59.8
Medtr2g006040 Medicago truncatula HOM05D003037 ORTHO05D003659 1.3e-31 140.2 114 56.1
PGR142G1570 Punica granatum HOM05D003037 ORTHO05D003659 1.3e-31 140.2 88 70.5
HPP92_003874 Vanilla planifolia HOM05D003037 ORTHO05D003659 1.3e-31 140.2 88 71.6
CSS0017565 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 1.6e-31 139.8 84 73.8
Ca_00048_v3 Cicer arietinum L. HOM05D003037 ORTHO05D003659 1.6e-31 139.8 114 57.0
Peaxi162Scf00002g02511 Petunia axillaris HOM05D003037 ORTHO05D003659 1.6e-31 139.8 88 70.5
Potri.019G057200 Populus trichocarpa HOM05D003037 ORTHO05D003659 1.6e-31 139.8 113 59.3
Actinidia39012 Actinidia chinensis HOM05D003037 ORTHO05D003659 2.8e-31 139.0 88 71.6
Manes.10G120100 Manihot esculenta HOM05D003037 ORTHO05D003659 2.8e-31 139.0 87 73.6
Phvul.006G218100 Phaseolus vulgaris HOM05D003037 ORTHO05D003659 2.8e-31 139.0 86 70.9
RcHm_v2.0_Chr6g0256761 Rosa chinensis HOM05D003037 ORTHO05D003659 2.8e-31 139.0 88 71.6
RcHm_v2.0_Chr6g0258041 Rosa chinensis HOM05D003037 ORTHO05D003659 2.8e-31 139.0 88 71.6
Sp2g05490 Schrenkiella parvula HOM05D003037 ORTHO05D003659 2.8e-31 139.0 112 58.9
BcaC09g49512 Brassica carinata HOM05D003037 ORTHO05D003659 3.7e-31 138.7 112 58.9
C01p35730 Brassica napus HOM05D003037 ORTHO05D003659 3.7e-31 138.7 112 58.9
BolC1t03532H Brassica oleracea HOM05D003037 ORTHO05D003659 3.7e-31 138.7 112 58.9
BraA01t02947Z Brassica rapa HOM05D003037 ORTHO05D003659 3.7e-31 138.7 112 58.9
Eucgr.G00352 Eucalyptus grandis HOM05D003037 ORTHO05D003659 3.7e-31 138.7 88 69.3
Lj4g0001882 Lotus japonicus HOM05D003037 ORTHO05D003659 3.7e-31 138.7 112 59.8
vmacro01725 Vaccinium macrocarpon HOM05D003037 ORTHO05D003659 3.7e-31 138.7 88 70.5
BcaC06g31782 Brassica carinata HOM05D003037 ORTHO05D005835 4.8e-31 138.3 86 70.9
Hma1.2p1_1108F.1_g257915 Hydrangea macrophylla HOM05D003037 ORTHO05D003659 4.8e-31 138.3 88 69.3
Hma1.2p1_1108F.1_g257920 Hydrangea macrophylla HOM05D003037 ORTHO05D003659 4.8e-31 138.3 88 69.3
Lsat_1_v5_gn_7_75321 Lactuca sativa HOM05D003037 ORTHO05D003659 4.8e-31 138.3 88 68.2
Lsat_1_v5_gn_9_120700 Lactuca sativa HOM05D003037 ORTHO05D003659 8.1e-31 137.5 114 57.0
CSS0041741 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 1.1e-30 137.1 84 72.6
A01p28170 Brassica napus HOM05D003037 ORTHO05D003659 1.4e-30 136.7 112 58.0
Pp3c22_160 Physcomitrium patens HOM05D003037 ORTHO05D003659 1.8e-30 136.3 88 69.3
Aa31LG2G11000 Aethionema arabicum HOM05D003037 ORTHO05D003659 3.1e-30 135.6 112 58.9
CSS0002197 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 3.1e-30 135.6 83 73.5
Sed0025195 Sechium edule HOM05D003037 ORTHO05D003659 4.0e-30 135.2 114 55.3
ECA236G0695 Erigeron canadensis HOM05D003037 ORTHO05D003659 5.3e-30 134.8 114 56.1
AagrBONN_evm.TU.Sc2ySwM_368.301 Anthoceros agrestis HOM05D003037 ORTHO05D003659 9.0e-30 134.0 88 65.9
Pp3c18_12130 Physcomitrium patens HOM05D003037 ORTHO05D003659 9.0e-30 134.0 88 67.0
Mapoly0157s0018 Marchantia polymorpha HOM05D003037 ORTHO05D003659 2.0e-29 132.9 116 53.4
Hma1.2p1_0297F.1_g117000 Hydrangea macrophylla HOM05D003037 ORTHO05D003659 2.6e-29 132.5 88 68.2
AL2G18010 Arabidopsis lyrata HOM05D003037 ORTHO05D003659 3.4e-29 132.1 86 70.9
Lsat_1_v5_gn_9_120721 Lactuca sativa HOM05D003037 ORTHO05D003659 5.8e-29 131.3 126 51.6
Potri.004G222400 Populus trichocarpa HOM05D003037 ORTHO05D003659 1.7e-28 129.8 113 54.9
SMO146G0343 Selaginella moellendorffii HOM05D003037 ORTHO05D003659 1.7e-28 129.8 88 63.6
MSTRG.27854 Avicennia marina HOM05D003037 ORTHO05D003659 2.9e-28 129.0 88 65.9
MBI04_g26974_MAGBIO Magnolia biondii HOM05D003037 ORTHO05D003659 2.4e-27 125.9 130 48.5
Sabra01G0168500 Salix brachista HOM05D003037 ORTHO05D003659 4.2e-27 125.2 113 52.2
THA.LOC104816806 Tarenaya hassleriana HOM05D003037 ORTHO05D003659 1.2e-26 123.6 114 49.1
AL1G20370 Arabidopsis lyrata HOM05D003037 ORTHO05D003659 2.7e-26 122.5 115 53.0
Dinv07473 Davidia involucrata HOM05D003037 ORTHO05D003659 1.3e-25 120.2 88 64.8
Os03g0134300 Oryza sativa ssp. japonica HOM05D003037 ORTHO05D003659 3.0e-25 119.0 88 55.7
CBR_g16944 Chara braunii HOM05D003037 ORTHO05D003659 5.6e-24 114.8 88 53.4
Lj9P233T35 Lonicera japonica HOM05D003037 ORTHO05D003659 7.4e-24 114.4 65 81.5
Zm00001eb316500 Zea mays HOM05D003037 ORTHO05D003659 1.3e-23 113.6 126 47.6
Prupe.8G013100 Prunus persica HOM05D003037 ORTHO05D003659 2.8e-23 112.5 113 52.2
CSS0016888 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 2.4e-22 109.4 84 63.1
CSS0046523 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 3.1e-22 109.0 84 63.1
QL02p067309 Quercus lobata HOM05D003037 ORTHO05D003659 3.4e-21 105.5 74 63.5
Cre09.g410650 Chlamydomonas reinhardtii HOM05D003037 ORTHO05D003659 1.3e-20 103.6 95 46.3
CSS0001224 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 1.4e-19 100.1 84 60.7
SGA_v2.0_scaffold279G46800 Striga asiatica HOM05D003037 ORTHO05D403307 1.2e-18 97.1 59 71.2
CSS0026106 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 8.7e-17 90.9 84 54.8
Lj9C300T15 Lonicera japonica HOM05D003037 ORTHO05D003659 1.5e-16 90.1 53 77.4
MCO01G429 Micromonas commoda HOM05D003037 ORTHO05D003659 5.7e-16 88.2 86 47.7
PRCOL_00006544 Prasinoderma coloniale HOM05D003037 ORTHO05D003659 9.7e-16 87.4 112 41.1
Hma1.2p1_1469F.1_g285550 Hydrangea macrophylla HOM05D003037 ORTHO05D003659 1.9e-11 73.2 47 66.0
Hma1.2p1_1658F.1_g296076 Hydrangea macrophylla HOM05D003037 ORTHO05D003659 1.9e-11 73.2 47 66.0
HPP92_003892 Vanilla planifolia HOM05D003037 ORTHO05D003659 5.1e-09 65.1 88 43.2
SEGI_23102 Sequoiadendron giganteum HOM05D001137 ORTHO05D005066 1.3e-07 60.5 51 66.7


User provided reference genes

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