Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07937 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 0.0e+00 1157.9 704 100.0
SEGI_00052 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 1.9e-274 949.1 590 100.0
ATR0661G561 Amborella trichopoda HOM05D004921 ORTHO05D006008 1.6e-103 381.3 425 53.4
Nn5g28998 Nelumbo nucifera HOM05D004921 ORTHO05D006008 1.4e-99 368.2 420 51.7
Aqoxy6G00539 Aquilegia oxysepala HOM05D004921 ORTHO05D006008 1.3e-97 361.7 423 50.8
Prupe.6G178900 Prunus persica HOM05D004921 ORTHO05D006008 4.9e-97 359.8 421 50.6
CiPaw.03G138100 Carya illinoinensis HOM05D004921 ORTHO05D006008 1.9e-96 357.8 410 51.5
TAR381G1578 Trochodendron aralioides HOM05D004921 ORTHO05D006008 7.1e-96 355.9 390 54.1
TAR381G0204 Trochodendron aralioides HOM05D004921 ORTHO05D006008 4.6e-95 353.2 392 53.6
MD01G1023900 Malus domestica HOM05D004921 ORTHO05D006008 2.3e-94 350.9 383 53.0
PSO133G0077 Papaver somniferum HOM05D004921 ORTHO05D006008 6.6e-94 349.4 428 50.2
PSO541G2636 Papaver somniferum HOM05D004921 ORTHO05D006008 1.5e-93 348.2 428 50.5
Thecc.01G107800 Theobroma cacao HOM05D004921 ORTHO05D006008 7.3e-93 345.9 376 52.9
Gohir.D11G225200 Gossypium hirsutum HOM05D004921 ORTHO05D006008 1.6e-92 344.7 407 50.6
Gohir.A11G198900 Gossypium hirsutum HOM05D004921 ORTHO05D006008 4.7e-92 343.2 408 50.0
Gorai.007G242500 Gossypium raimondii HOM05D004921 ORTHO05D006008 8.1e-92 342.4 407 50.4
HPP92_016473 Vanilla planifolia HOM05D004921 ORTHO05D006008 8.1e-92 342.4 419 50.4
MSTRG.23325 Avicennia marina HOM05D004921 ORTHO05D006008 2.4e-91 340.9 396 50.8
Rhsim10G0156300 Rhododendron simsii HOM05D004921 ORTHO05D006008 2.4e-91 340.9 393 52.4
Duzib147G0642 Durio zibethinus HOM05D004921 ORTHO05D006008 3.1e-91 340.5 385 51.9
Eucgr.I00377 Eucalyptus grandis HOM05D004921 ORTHO05D006008 8.9e-91 339.0 428 50.5
RcHm_v2.0_Chr2g0115541 Rosa chinensis HOM05D004921 ORTHO05D006008 1.2e-90 338.6 402 50.2
Atru.chr4.263 Acer truncatum HOM05D004921 ORTHO05D006008 4.4e-90 336.7 398 50.8
Actinidia36610 Actinidia chinensis HOM05D004921 ORTHO05D006008 7.6e-90 335.9 387 51.9
Sopen04g024290 Solanum pennellii HOM05D004921 ORTHO05D006008 7.6e-90 335.9 414 49.5
Dinv21950 Davidia involucrata HOM05D004921 ORTHO05D006008 2.2e-89 334.3 328 57.3
BraA08t34298Z Brassica rapa HOM05D004921 ORTHO05D006008 4.9e-89 333.2 401 49.9
CDE04G0927 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 8.4e-89 332.4 427 49.2
THA.LOC104807708 Tarenaya hassleriana HOM05D004921 ORTHO05D006008 1.1e-88 332.0 398 49.5
Manes.12G138700 Manihot esculenta HOM05D004921 ORTHO05D006008 3.2e-88 330.5 395 50.6
HPP92_027138 Vanilla planifolia HOM05D004921 ORTHO05D006008 4.2e-88 330.1 373 53.6
Migut.H02393 Erythranthe guttata HOM05D004921 ORTHO05D006008 7.1e-88 329.3 404 50.2
COL.COLO4_11048 Corchorus olitorius HOM05D004921 ORTHO05D006008 9.3e-88 328.9 421 48.9
BcaC01g00311 Brassica carinata HOM05D004921 ORTHO05D006008 1.2e-87 328.6 432 47.9
Gohir.D12G094600 Gossypium hirsutum HOM05D004921 ORTHO05D006008 1.2e-87 328.6 386 50.8
Gorai.008G103200 Gossypium raimondii HOM05D004921 ORTHO05D006008 1.6e-87 328.2 386 50.8
C03p78130 Brassica napus HOM05D004921 ORTHO05D006008 2.1e-87 327.8 432 47.9
Duzib187G0704 Durio zibethinus HOM05D004921 ORTHO05D006008 2.7e-87 327.4 378 51.6
Potri.005G080200 Populus trichocarpa HOM05D004921 ORTHO05D006008 3.5e-87 327.0 338 55.3
BolC3t20076H Brassica oleracea HOM05D004921 ORTHO05D006008 6.0e-87 326.2 432 47.5
MSTRG.2547 Avicennia marina HOM05D004921 ORTHO05D006008 7.8e-87 325.9 373 51.5
TWI53G0980 Tripterygium wilfordii HOM05D004921 ORTHO05D006008 7.8e-87 325.9 437 47.4
AUR62003756 Chenopodium quinoa HOM05D004921 ORTHO05D006008 1.0e-86 325.5 387 49.4
HanXRQChr02g0041141 Helianthus annuus HOM05D004921 ORTHO05D006008 1.0e-86 325.5 386 50.0
Sed0006076 Sechium edule HOM05D004921 ORTHO05D006008 2.3e-86 324.3 439 46.5
PGR004G1500 Punica granatum HOM05D004921 ORTHO05D006008 3.9e-86 323.6 435 48.0
CARHR247030 Cardamine hirsuta HOM05D004921 ORTHO05D006008 8.7e-86 322.4 427 46.1
A08p23440 Brassica napus HOM05D004921 ORTHO05D006008 1.1e-85 322.0 424 47.4
Nitab4.5_0001095g0090 Nicotiana tabacum HOM05D004921 ORTHO05D006008 1.1e-85 322.0 406 49.3
BcaB03g12266 Brassica carinata HOM05D004921 ORTHO05D006008 1.9e-85 321.2 436 46.8
AUR62002041 Chenopodium quinoa HOM05D004921 ORTHO05D006008 9.6e-85 318.9 412 47.3
Zm00001eb431730 Zea mays HOM05D004921 ORTHO05D006008 9.6e-85 318.9 378 49.7
SGA_v2.0_scaffold51G18730 Striga asiatica HOM05D004921 ORTHO05D006008 2.1e-84 317.8 395 50.1
CsaV3_6G045720 Cucumis sativus L. HOM05D004921 ORTHO05D006008 6.2e-84 316.2 401 48.4
EL10Ac6g15063 Beta vulgaris HOM05D004921 ORTHO05D006008 8.1e-84 315.8 387 49.4
Potri.007G087100 Populus trichocarpa HOM05D004921 ORTHO05D006008 8.1e-84 315.8 374 50.3
AT4G39690 Arabidopsis thaliana HOM05D004921 ORTHO05D006008 2.4e-83 314.3 690 36.8
Sc03g0002320 Simmondsia chinensis HOM05D004921 ORTHO05D006008 2.4e-83 314.3 420 47.9
Hma1.2p1_0070F.1_g037680 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 4.0e-83 313.5 350 52.0
TPR.G2186 Trifolium pratense HOM05D004921 ORTHO05D006008 9.0e-83 312.4 386 48.7
GSVIVG01022188001 Vitis vinifera HOM05D004921 ORTHO05D006008 9.0e-83 312.4 393 47.3
Carub.0007s0157 Capsella rubella HOM05D004921 ORTHO05D006008 3.4e-82 310.5 689 36.7
Sp7g36200 Schrenkiella parvula HOM05D004921 ORTHO05D006008 3.4e-82 310.5 695 35.8
MELO3C007782.2 Cucumis melo HOM05D004921 ORTHO05D006008 9.9e-82 308.9 658 36.8
Ciclev10025222m.g Citrus clementina HOM05D004921 ORTHO05D006008 1.3e-81 308.5 431 45.9
CANSAT01G2911 Cannabis sativa HOM05D004921 ORTHO05D006008 1.4e-80 305.1 652 35.9
CDE06G0766 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 1.4e-80 305.1 416 47.4
QL06p050536 Quercus lobata HOM05D004921 ORTHO05D006008 1.2e-79 302.0 667 36.0
Thhalv10024641m.g Eutrema salsugineum HOM05D004921 ORTHO05D006008 1.3e-78 298.5 682 35.6
AagrBONN_evm.TU.Sc2ySwM_344.1023 Anthoceros agrestis HOM05D004921 ORTHO05D006008 3.9e-78 297.0 397 46.6
MD15G1329400 Malus domestica HOM05D004921 ORTHO05D006008 5.1e-78 296.6 383 48.0
AL7G11890 Arabidopsis lyrata HOM05D004921 ORTHO05D006008 1.3e-76 292.0 692 34.1
Gohir.A12G091122 Gossypium hirsutum HOM05D004921 ORTHO05D006008 1.3e-76 292.0 379 48.3
Lsat_1_v5_gn_5_40701 Lactuca sativa HOM05D004921 ORTHO05D006008 1.3e-76 292.0 424 44.6
Hund13647 Selenicereus undatus HOM05D004921 ORTHO05D006008 2.8e-76 290.8 407 46.7
Lalb_Chr07g0184941 Lupinus albus HOM05D004921 ORTHO05D006008 6.2e-76 289.7 386 45.9
Lj4g0017071 Lotus japonicus HOM05D004921 ORTHO05D006008 5.3e-75 286.6 400 45.5
Glyma.05G181700 Glycine max HOM05D004921 ORTHO05D006008 9.0e-75 285.8 379 45.4
ECA246G4277 Erigeron canadensis HOM05D004921 ORTHO05D006008 3.4e-74 283.9 382 46.1
Lalb_Chr13g0296081 Lupinus albus HOM05D004921 ORTHO05D006008 3.4e-74 283.9 437 42.8
ClCG01G019030 Citrullus lanatus HOM05D004921 ORTHO05D006008 4.5e-74 283.5 438 42.7
Ah.03g142660 Amaranthus hybridus HOM05D004921 ORTHO05D006008 5.8e-74 283.1 387 45.2
Sabra05G0065800 Salix brachista HOM05D004921 ORTHO05D006008 1.7e-73 281.6 460 41.1
MBI05_g00773_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 6.4e-73 279.6 438 42.7
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea HOM05D004921 ORTHO05D006008 2.4e-72 277.7 331 48.3
Psat7g053360 Pisum sativum HOM05D004921 ORTHO05D006008 3.2e-72 277.3 387 43.7
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea HOM05D004921 ORTHO05D006008 9.3e-72 275.8 334 47.9
FvH4_1g21670 Fragaria vesca HOM05D004921 ORTHO05D006008 1.8e-70 271.6 427 42.9
Peaxi162Scf00204g00620 Petunia axillaris HOM05D004921 ORTHO05D006008 1.8e-70 271.6 406 43.8
Glyma.08G139400 Glycine max HOM05D004921 ORTHO05D006008 3.9e-70 270.4 386 43.5
FAN28G0310 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.5e-69 268.5 437 42.6
Lj4A880G51 Lonicera japonica HOM05D004921 ORTHO05D006008 2.1e-68 264.6 406 43.1
FAN26G3332 Fragaria x ananassa HOM05D004921 ORTHO05D006008 3.7e-68 263.8 437 41.9
FAN26G3387 Fragaria x ananassa HOM05D004921 ORTHO05D006008 3.7e-68 263.8 437 41.9
Aa31LG6G15580 Aethionema arabicum HOM05D004921 ORTHO05D006008 3.1e-67 260.8 693 32.8
vmacro12934 Vaccinium macrocarpon HOM05D004921 ORTHO05D006008 9.0e-67 259.2 393 45.0
FAN23G2445 Fragaria x ananassa HOM05D004921 ORTHO05D006008 4.5e-66 256.9 453 40.2
FAN19G2080 Fragaria x ananassa HOM05D004921 ORTHO05D006008 5.8e-66 256.5 437 41.4
Phvul.002G262700 Phaseolus vulgaris HOM05D004921 ORTHO05D006008 1.3e-65 255.4 711 31.4
Mapoly0001s0396 Marchantia polymorpha HOM05D004921 ORTHO05D006008 9.3e-64 249.2 381 41.7
Medtr8g091480 Medicago truncatula HOM05D004921 ORTHO05D006008 9.3e-64 249.2 386 42.5
VMungo0251G2130 Vigna mungo HOM05D004921 ORTHO05D006008 6.0e-63 246.5 716 31.7
Cc07_g15680 Coffea canephora HOM05D004921 ORTHO05D006008 1.1e-59 235.7 224 60.7
SMO174G0199 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 9.0e-59 232.6 426 37.1
unitig_0.g2479 Utricularia gibba HOM05D004921 ORTHO05D006008 1.2e-58 232.3 409 39.9
Haze_24997 Corylus avellana HOM05D004921 ORTHO05D006008 3.4e-58 230.7 688 32.1
Pp3c3_27510 Physcomitrium patens HOM05D004921 ORTHO05D006008 3.4e-58 230.7 430 37.4
SEGI_21175 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 4.3e-53 213.8 115 99.1
DCAR_001020 Daucus carota HOM05D004921 ORTHO05D006008 8.2e-52 209.5 396 38.9
CBR_g51480 Chara braunii HOM05D004921 ORTHO05D006008 2.1e-47 194.9 373 34.9
MBI05_g36740_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 9.1e-43 179.5 215 46.5
A01p00580 Brassica napus HOM05D004921 ORTHO05D006008 1.5e-37 162.2 261 39.8
SMO197G0017 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 2.7e-31 141.4 220 40.0
Nitab4.5_0000518g0040 Nicotiana tabacum HOM05D004921 ORTHO05D006008 4.0e-30 137.5 215 46.0
Sabra07G0072000 Salix brachista HOM05D004921 ORTHO05D006008 5.7e-29 133.7 444 30.6
BcaNung05547 Brassica carinata HOM05D004921 ORTHO05D006008 1.1e-27 129.4 219 39.3
BraA01t00066Z Brassica rapa HOM05D004921 ORTHO05D006008 2.4e-27 128.3 186 40.3
Dinv16320 Davidia involucrata HOM05D004921 ORTHO05D006008 1.6e-26 125.6 123 54.5
BolC1t00074H Brassica oleracea HOM05D004921 ORTHO05D006008 5.9e-26 123.6 108 58.3
Nitab4.5_0000518g0050 Nicotiana tabacum HOM05D004921 ORTHO05D006008 7.7e-26 123.2 115 53.9
Zm00001eb069160 Zea mays HOM05D004921 ORTHO05D006008 1.7e-25 122.1 182 44.0
CAN.G727.1 Capsicum annuum HOM05D004921 ORTHO05D006008 2.9e-25 121.3 113 53.1
Hma1.2p1_0070F.1_g037670 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 8.5e-25 119.8 188 46.3
C01p00710 Brassica napus HOM05D004921 ORTHO05D006008 1.5e-24 119.0 109 57.8
Cpa.g.sc82.58 Carica papaya HOM05D004921 ORTHO05D006008 3.0e-22 111.3 110 51.8
Cc07_g15670 Coffea canephora HOM05D004921 ORTHO05D006008 4.0e-22 110.9 122 47.5
Cpa.g.sc82.56 Carica papaya HOM05D004921 ORTHO05D006008 6.3e-20 103.6 91 58.2
Dinv04895 Davidia involucrata HOM05D004921 ORTHO05D006008 1.9e-16 92.0 134 46.3
Nn5g31279 Nelumbo nucifera HOM05D004921 ORTHO05D006008 1.9e-16 92.0 92 52.2
BcaNung00891 Brassica carinata HOM05D004921 ORTHO05D006008 2.1e-15 88.6 88 50.0
MCO12G391 Micromonas commoda HOM05D004921 ORTHO05D006008 3.6e-15 87.8 395 24.8
Dinv32118 Davidia involucrata HOM05D004921 ORTHO05D006008 3.0e-14 84.7 134 44.0
Dinv40591 Davidia involucrata HOM05D004921 ORTHO05D006008 5.2e-14 84.0 132 44.7
Cpa.g.sc82.54 Carica papaya HOM05D004921 ORTHO05D006008 3.7e-12 77.8 93 51.6
Os04g0636600 Oryza sativa ssp. japonica HOM05D004921 ORTHO05D006008 9.1e-11 73.2 129 39.5


User provided reference genes

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