Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07901 Sequoiadendron giganteum HOM05D006167 ORTHO05D007635 4.4e-83 311.2 155 100.0
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 5.0e-10 68.6 60 58.3
Mapoly0016s0086 Marchantia polymorpha HOM05D006167 ORTHO05D007635 8.5e-10 67.8 62 59.7
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 1.1e-09 67.4 61 57.4
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 1.4e-09 67.0 61 57.4
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 9.4e-09 64.3 60 60.0
Pp3c5_19670 Physcomitrium patens HOM05D006167 ORTHO05D007635 1.2e-08 63.9 60 60.0
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 1.2e-08 63.9 61 54.1
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 2.1e-08 63.2 60 56.7
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 3.6e-08 62.4 53 60.4
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 3.6e-08 62.4 61 54.1
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 3.6e-08 62.4 61 54.1
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 3.6e-08 62.4 61 57.4
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 4.6e-08 62.0 61 54.1
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 4.6e-08 62.0 61 52.5
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 4.6e-08 62.0 61 55.7
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 7.9e-08 61.2 61 55.7
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 7.9e-08 61.2 61 55.7
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 1.4e-07 60.5 61 55.7
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 1.4e-07 60.5 61 55.7
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 1.4e-07 60.5 61 55.7
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 1.4e-07 60.5 61 55.7
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 1.4e-07 60.5 67 47.8
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 1.8e-07 60.1 61 54.1
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 1.8e-07 60.1 62 53.2
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 3.9e-07 58.9 52 57.7
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 5.1e-07 58.5 53 54.7
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 5.1e-07 58.5 61 52.5
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 8.8e-07 57.8 61 52.5
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 8.8e-07 57.8 61 52.5
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 1.1e-06 57.4 61 57.4
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 1.1e-06 57.4 61 57.4
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 1.1e-06 57.4 61 57.4
SHI00872 Sapria himalayana HOM05D006167 ORTHO05D007635 1.1e-06 57.4 61 52.5
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.5e-06 57.0 61 50.8
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 2.0e-06 56.6 61 49.2
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 2.5e-06 56.2 51 60.8
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 3.3e-06 55.8 70 48.6
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 3.3e-06 55.8 68 45.6
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 4.3e-06 55.5 63 49.2
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 4.3e-06 55.5 61 47.5
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 5.7e-06 55.1 59 47.5
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 5.7e-06 55.1 61 47.5
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 5.7e-06 55.1 61 47.5
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 5.7e-06 55.1 61 55.7
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 7.4e-06 54.7 52 59.6
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 9.7e-06 54.3 61 45.9


User provided reference genes

Program Settings