Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07888 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 1.1e-90 336.7 169 100.0
Mapoly0001s0359 Marchantia polymorpha HOM05D003420 ORTHO05D003970 1.7e-40 169.9 100 78.0
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 4.9e-35 151.8 103 73.8
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 2.0e-33 146.4 103 69.9
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 2.7e-33 146.0 103 69.9
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 2.7e-33 146.0 103 69.9
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 3.5e-33 145.6 103 69.9
Prupe.4G277400 Prunus persica HOM05D003420 ORTHO05D003970 4.5e-33 145.2 103 68.9
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 5.9e-33 144.8 103 68.9
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 1.0e-32 144.1 103 68.0
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 1.0e-32 144.1 103 68.0
AagrBONN_evm.TU.Sc2ySwM_117.1498 Anthoceros agrestis HOM05D003420 ORTHO05D003970 1.3e-32 143.7 123 54.5
RcHm_v2.0_Chr1g0335041 Rosa chinensis HOM05D003420 ORTHO05D003970 1.3e-32 143.7 103 68.0
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 1.7e-32 143.3 103 68.0
Haze_13393 Corylus avellana HOM05D003420 ORTHO05D003970 1.7e-32 143.3 103 68.0
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 2.9e-32 142.5 103 68.0
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 2.9e-32 142.5 103 68.0
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 3.9e-32 142.1 104 65.4
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 6.6e-32 141.4 103 67.0
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 6.6e-32 141.4 103 68.0
Haze_17875 Corylus avellana HOM05D003420 ORTHO05D003970 8.6e-32 141.0 103 67.0
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 1.1e-31 140.6 103 67.0
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 1.5e-31 140.2 103 67.0
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 1.5e-31 140.2 103 66.0
CDE04G2480 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 1.5e-31 140.2 102 68.6
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 1.9e-31 139.8 95 68.4
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 1.9e-31 139.8 103 67.0
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 1.9e-31 139.8 103 67.0
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 1.9e-31 139.8 103 67.0
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 1.9e-31 139.8 103 67.0
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 1.9e-31 139.8 103 66.0
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 1.9e-31 139.8 103 68.0
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 1.9e-31 139.8 103 66.0
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 2.5e-31 139.4 103 67.0
Hund17515 Selenicereus undatus HOM05D003420 ORTHO05D003970 2.5e-31 139.4 103 68.0
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 3.3e-31 139.0 103 67.0
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 3.3e-31 139.0 103 68.0
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 3.3e-31 139.0 103 68.0
Pp3c8_3920 Physcomitrium patens HOM05D003420 ORTHO05D003970 3.3e-31 139.0 117 57.3
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 4.3e-31 138.7 102 67.6
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 4.3e-31 138.7 103 66.0
VMungo0331G0815 Vigna mungo HOM05D003420 ORTHO05D003970 4.3e-31 138.7 103 67.0
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 4.3e-31 138.7 103 66.0
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 5.6e-31 138.3 102 65.7
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 5.6e-31 138.3 103 67.0
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 5.6e-31 138.3 102 67.6
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 5.6e-31 138.3 102 67.6
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 5.6e-31 138.3 103 66.0
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 5.6e-31 138.3 103 66.0
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 7.3e-31 137.9 97 66.0
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 7.3e-31 137.9 92 70.7
Nn8g40471 Nelumbo nucifera HOM05D003420 ORTHO05D003970 7.3e-31 137.9 106 63.2
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 7.3e-31 137.9 103 66.0
Actinidia15626 Actinidia chinensis HOM05D003420 ORTHO05D003970 9.5e-31 137.5 103 64.1
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 9.5e-31 137.5 103 66.0
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 9.5e-31 137.5 103 65.0
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 9.5e-31 137.5 103 66.0
QL02p034918 Quercus lobata HOM05D003420 ORTHO05D003970 9.5e-31 137.5 103 66.0
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 9.5e-31 137.5 103 66.0
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 1.2e-30 137.1 131 55.0
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 1.2e-30 137.1 103 67.0
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 1.6e-30 136.7 102 65.7
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 1.6e-30 136.7 103 66.0
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 2.1e-30 136.3 92 68.5
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 2.1e-30 136.3 92 68.5
QL05p025142 Quercus lobata HOM05D003420 ORTHO05D003970 2.1e-30 136.3 103 64.1
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 2.1e-30 136.3 103 64.1
Zm00001eb254950 Zea mays HOM05D003420 ORTHO05D003970 2.1e-30 136.3 101 64.4
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 2.8e-30 136.0 96 66.7
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 2.8e-30 136.0 92 67.4
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 3.6e-30 135.6 104 63.5
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 3.6e-30 135.6 103 66.0
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 3.6e-30 135.6 102 66.7
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 3.6e-30 135.6 102 66.7
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 3.6e-30 135.6 95 66.3
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 3.6e-30 135.6 103 67.0
TWI32G0245 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 3.6e-30 135.6 103 64.1
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 4.7e-30 135.2 103 63.1
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 6.1e-30 134.8 104 62.5
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 6.1e-30 134.8 95 66.3
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 6.1e-30 134.8 126 54.8
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 8.0e-30 134.4 91 65.9
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 8.0e-30 134.4 103 67.0
SMO298G0019 Selaginella moellendorffii HOM05D003420 ORTHO05D003970 1.0e-29 134.0 94 67.0
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 1.4e-29 133.7 90 68.9
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 1.4e-29 133.7 90 68.9
CARHR290940 Cardamine hirsuta HOM05D003420 ORTHO05D003970 1.4e-29 133.7 104 61.5
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 1.4e-29 133.7 103 64.1
HanXRQChr01g0002061 Helianthus annuus HOM05D003420 ORTHO05D003970 1.4e-29 133.7 102 63.7
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 1.4e-29 133.7 103 65.0
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 1.4e-29 133.7 104 62.5
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 1.4e-29 133.7 104 62.5
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 1.8e-29 133.3 104 61.5
Atru.chr13.1960 Acer truncatum HOM05D003420 ORTHO05D003970 2.3e-29 132.9 102 64.7
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 2.3e-29 132.9 103 62.1
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 2.3e-29 132.9 103 62.1
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 2.3e-29 132.9 103 62.1
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 2.3e-29 132.9 103 62.1
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 2.3e-29 132.9 103 62.1
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 2.3e-29 132.9 104 61.5
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 2.3e-29 132.9 103 63.1
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 2.3e-29 132.9 95 70.5
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 2.3e-29 132.9 102 65.7
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 3.1e-29 132.5 104 61.5
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 3.1e-29 132.5 104 61.5
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 3.1e-29 132.5 104 61.5
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 3.1e-29 132.5 104 61.5
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 3.1e-29 132.5 104 61.5
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 3.1e-29 132.5 103 65.0
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 4.0e-29 132.1 103 65.0
Lj4C710G5 Lonicera japonica HOM05D003420 ORTHO05D003970 4.0e-29 132.1 93 65.6
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 5.2e-29 131.7 98 64.3
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 6.8e-29 131.3 103 64.1
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 6.8e-29 131.3 115 57.4
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 1.2e-28 130.6 103 62.1
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 2.0e-28 129.8 91 69.2
vmacro11081 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 2.0e-28 129.8 118 58.5
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 3.4e-28 129.0 88 68.2
AagrBONN_evm.TU.Sc2ySwM_228.2748 Anthoceros agrestis HOM05D003420 ORTHO05D003970 4.4e-28 128.6 102 63.7
Zm00001eb194380 Zea mays HOM05D003420 ORTHO05D003970 5.8e-28 128.3 91 63.7
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 7.5e-28 127.9 91 67.0
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 2.9e-27 125.9 94 67.0
AUR62027529 Chenopodium quinoa HOM05D003420 ORTHO05D003970 6.4e-27 124.8 123 54.5
AUR62030227 Chenopodium quinoa HOM05D003420 ORTHO05D003970 6.4e-27 124.8 123 54.5
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 6.4e-27 124.8 99 60.6
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 8.3e-27 124.4 85 68.2
unitig_46.g18008 Utricularia gibba HOM05D003420 ORTHO05D003970 2.7e-25 119.4 125 51.2
CBR_g30506 Chara braunii HOM05D003420 ORTHO05D003970 4.6e-25 118.6 99 55.6
Psat4g195800 Pisum sativum HOM05D003420 ORTHO05D003970 1.3e-24 117.1 153 45.1
CDE06G0862 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 8.6e-24 114.4 102 58.8
Ca_19958_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 3.3e-23 112.5 97 59.8
DCAR_009600 Daucus carota HOM05D003420 ORTHO05D003970 7.8e-17 91.3 62 67.7
Migut.C00173 Erythranthe guttata HOM05D003420 ORTHO05D003970 1.7e-16 90.1 61 67.2
ATR0824G022 Amborella trichopoda HOM05D003420 ORTHO05D003970 2.5e-15 86.3 63 68.3
MBI02_g35948_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 9.5e-15 84.3 94 47.9
COL.COLO4_12104 Corchorus olitorius HOM05D003420 ORTHO05D003970 8.1e-14 81.3 82 51.2
Cpa.g.sc66.124 Carica papaya HOM05D003420 ORTHO05D003970 3.1e-13 79.3 63 63.5
BcaB03g15619 Brassica carinata HOM05D003420 ORTHO05D003970 4.4e-12 75.5 52 67.3
MCO11G044 Micromonas commoda HOM05D003420 ORTHO05D003970 1.6e-09 67.0 75 40.0
Cpa.g.sc66.125 Carica papaya HOM05D003420 ORTHO05D003970 1.3e-08 63.9 81 45.7
BolC6t38648H Brassica oleracea HOM05D003420 ORTHO05D003970 3.0e-08 62.8 71 45.1


User provided reference genes

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