Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07868 Sequoiadendron giganteum HOM05D007662 ORTHO05D009666 7.9e-100 367.1 182 100.0
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 1.9e-08 63.5 40 70.0
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 2.4e-08 63.2 37 73.0
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 5.5e-08 62.0 38 71.1
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 9.3e-08 61.2 68 44.1
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 1.6e-07 60.5 50 60.0
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 2.1e-07 60.1 52 57.7
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 2.1e-07 60.1 65 46.2
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 2.7e-07 59.7 39 66.7
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 2.7e-07 59.7 39 64.1
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 2.7e-07 59.7 39 66.7
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 2.7e-07 59.7 52 55.8
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 3.5e-07 59.3 55 49.1
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 3.5e-07 59.3 42 66.7
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 3.5e-07 59.3 39 64.1
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 3.5e-07 59.3 39 64.1
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 3.5e-07 59.3 39 64.1
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 3.5e-07 59.3 39 64.1
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 4.6e-07 58.9 37 70.3
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 4.6e-07 58.9 51 54.9
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 4.6e-07 58.9 60 51.7
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 4.6e-07 58.9 60 51.7
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 4.6e-07 58.9 60 51.7
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 4.6e-07 58.9 37 70.3
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 4.6e-07 58.9 39 66.7
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 4.6e-07 58.9 37 70.3
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 4.6e-07 58.9 64 51.6
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 4.6e-07 58.9 39 64.1
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 4.6e-07 58.9 56 53.6
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 4.6e-07 58.9 52 55.8
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 6.0e-07 58.5 37 67.6
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 6.0e-07 58.5 37 67.6
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 6.0e-07 58.5 38 65.8
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 6.0e-07 58.5 47 59.6
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 7.9e-07 58.2 54 51.9
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 7.9e-07 58.2 38 65.8
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 7.9e-07 58.2 49 61.2
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 1.0e-06 57.8 37 70.3
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 1.0e-06 57.8 39 66.7
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.0e-06 57.8 42 64.3
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 1.0e-06 57.8 37 67.6
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 1.0e-06 57.8 37 67.6
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 1.3e-06 57.4 45 60.0
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 1.3e-06 57.4 45 60.0
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 1.3e-06 57.4 34 73.5
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 1.8e-06 57.0 37 67.6
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 2.3e-06 56.6 37 67.6
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 2.3e-06 56.6 37 67.6
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 2.3e-06 56.6 37 64.9
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 2.3e-06 56.6 37 62.2
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 3.0e-06 56.2 44 54.5
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 3.9e-06 55.8 39 64.1
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 3.9e-06 55.8 37 67.6
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 5.1e-06 55.5 37 64.9
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 5.1e-06 55.5 37 64.9
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 5.1e-06 55.5 37 64.9
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 5.1e-06 55.5 37 64.9
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 5.1e-06 55.5 37 64.9
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 5.1e-06 55.5 37 64.9
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 5.1e-06 55.5 37 64.9
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 5.1e-06 55.5 37 67.6
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 5.1e-06 55.5 37 64.9
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 6.7e-06 55.1 37 62.2
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 6.7e-06 55.1 37 64.9
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 6.7e-06 55.1 37 64.9
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 6.7e-06 55.1 37 64.9
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 8.7e-06 54.7 37 64.9
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 8.7e-06 54.7 37 64.9
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 8.7e-06 54.7 37 62.2
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 8.7e-06 54.7 37 62.2
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 8.7e-06 54.7 42 59.5
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 8.7e-06 54.7 42 59.5


User provided reference genes

Program Settings