Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.2e-93 344.4 173 100.0
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.9e-45 184.5 147 69.4
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.9e-45 184.5 147 69.4
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.2e-42 174.5 142 66.9
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.2e-42 174.5 115 77.4
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.2e-42 174.5 136 69.1
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 7.2e-42 174.5 106 81.1
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.4e-42 174.1 136 67.6
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.1e-41 172.9 136 68.4
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.1e-41 172.9 101 84.2
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.1e-41 171.4 142 64.8
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.9e-40 168.7 121 72.7
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-39 167.2 108 78.7
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.0e-39 166.4 105 77.1
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 3.3e-39 165.6 108 76.9
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.2e-38 162.9 114 73.7
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 3.7e-38 162.2 97 81.4
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.1e-37 159.1 93 87.1
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.0e-31 139.8 84 81.0
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.3e-30 137.1 74 90.5
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.3e-30 134.8 74 87.8
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.5e-28 130.2 83 77.1
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 8.2e-22 107.8 91 54.9
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 1.8e-21 106.7 110 50.0
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 5.3e-21 105.1 95 54.7
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.1e-21 104.4 60 85.0
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 2.6e-20 102.8 91 50.5
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 2.6e-20 102.8 93 51.6
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 3.5e-20 102.4 91 52.7
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 5.9e-20 101.7 93 52.7
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 7.7e-20 101.3 114 45.6
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 7.7e-20 101.3 111 43.2
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 7.7e-20 101.3 97 49.5
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 1.0e-19 100.9 92 52.2
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 1.3e-19 100.5 131 42.0
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 1.3e-19 100.5 92 51.1
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 1.3e-19 100.5 95 50.5
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 1.3e-19 100.5 96 49.0
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 1.3e-19 100.5 106 47.2
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 1.7e-19 100.1 99 47.5
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 1.7e-19 100.1 103 45.6
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 1.7e-19 100.1 95 51.6
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 1.7e-19 100.1 92 50.0
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 2.2e-19 99.8 110 46.4
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 2.2e-19 99.8 98 49.0
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 2.9e-19 99.4 92 50.0
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 3.8e-19 99.0 98 48.0
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 3.8e-19 99.0 92 51.1
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 3.8e-19 99.0 96 49.0
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 3.8e-19 99.0 102 48.0
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 5.0e-19 98.6 91 50.5
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 6.5e-19 98.2 91 51.6
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 6.5e-19 98.2 91 50.5
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 8.5e-19 97.8 98 49.0
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 1.1e-18 97.4 96 49.0
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 1.1e-18 97.4 96 47.9
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 1.1e-18 97.4 92 50.0
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 1.5e-18 97.1 98 49.0
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 1.5e-18 97.1 98 49.0
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 1.5e-18 97.1 92 50.0
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 1.5e-18 97.1 94 48.9
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 1.5e-18 97.1 112 45.5
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 1.9e-18 96.7 105 46.7
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 1.9e-18 96.7 95 46.3
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 1.9e-18 96.7 95 47.4
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 1.9e-18 96.7 111 44.1
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 1.9e-18 96.7 110 40.9
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 2.5e-18 96.3 98 49.0
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 2.5e-18 96.3 98 49.0
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 2.5e-18 96.3 92 50.0
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 3.2e-18 95.9 98 48.0
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 3.2e-18 95.9 111 44.1
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 3.2e-18 95.9 91 47.3
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 4.2e-18 95.5 98 48.0
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 4.2e-18 95.5 105 45.7
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 7.2e-18 94.7 111 45.0
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 7.2e-18 94.7 97 45.4
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 7.2e-18 94.7 94 50.0
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 7.2e-18 94.7 94 50.0
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 7.2e-18 94.7 96 46.9
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 9.4e-18 94.4 98 46.9
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 9.4e-18 94.4 97 45.4
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 9.4e-18 94.4 97 45.4
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 1.2e-17 94.0 93 48.4
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 1.2e-17 94.0 91 49.5
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.2e-17 94.0 91 49.5
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 1.2e-17 94.0 104 46.2
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 1.6e-17 93.6 92 46.7
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 1.6e-17 93.6 103 42.7
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 2.1e-17 93.2 98 46.9
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 2.1e-17 93.2 98 46.9
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.1e-17 93.2 91 49.5
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 2.1e-17 93.2 87 48.3
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 2.1e-17 93.2 108 46.3
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 2.7e-17 92.8 91 47.3
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 2.7e-17 92.8 95 45.3
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 2.7e-17 92.8 114 43.0
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 3.6e-17 92.4 98 45.9
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 3.6e-17 92.4 110 40.0
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 4.7e-17 92.0 91 48.4
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 4.7e-17 92.0 94 45.7
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 4.7e-17 92.0 104 45.2
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 6.1e-17 91.7 92 47.8
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 6.1e-17 91.7 91 48.4
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 6.1e-17 91.7 95 46.3
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 6.1e-17 91.7 95 46.3
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 8.0e-17 91.3 99 47.5
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 8.0e-17 91.3 99 47.5
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 8.0e-17 91.3 91 46.2
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 8.0e-17 91.3 99 47.5
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 8.0e-17 91.3 96 44.8
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 1.0e-16 90.9 98 45.9
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.0e-16 90.9 95 46.3
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.4e-16 90.5 91 56.0
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 1.8e-16 90.1 98 44.9
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 1.8e-16 90.1 98 44.9
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 1.8e-16 90.1 98 41.8
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 2.3e-16 89.7 98 44.9
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 2.3e-16 89.7 98 41.8
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 2.3e-16 89.7 96 44.8
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 2.3e-16 89.7 92 46.7
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 3.0e-16 89.4 98 45.9
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 4.0e-16 89.0 91 47.3
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 4.0e-16 89.0 112 43.8
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 4.0e-16 89.0 91 46.2
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 5.2e-16 88.6 98 41.8
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 5.2e-16 88.6 95 41.1
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 6.8e-16 88.2 91 48.4
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 6.8e-16 88.2 92 45.7
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 6.8e-16 88.2 98 42.9
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 8.8e-16 87.8 90 46.7
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 8.8e-16 87.8 96 43.8
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 1.2e-15 87.4 92 45.7
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 1.2e-15 87.4 92 45.7
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 1.5e-15 87.0 114 39.5
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 2.6e-15 86.3 92 44.6
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 7.5e-15 84.7 84 48.8
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 7.5e-15 84.7 92 44.6
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 9.8e-15 84.3 91 46.2
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 2.8e-14 82.8 132 36.4
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 2.8e-14 82.8 110 37.3
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 4.8e-14 82.0 91 44.0
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.8e-14 82.0 77 61.0
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 5.4e-13 78.6 109 36.7
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 9.1e-13 77.8 116 36.2
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 4.5e-12 75.5 156 33.3
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.3e-11 73.9 116 37.1
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 2.2e-11 73.2 71 47.9
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 3.2e-10 69.3 90 36.7
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 5.5e-10 68.6 79 43.0
SEGI_40445 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.6e-09 65.9 37 89.2
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 3.6e-09 65.9 110 35.5
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 4.7e-09 65.5 119 31.9
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-08 64.3 135 33.3


User provided reference genes

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